pypi: weka | Projects | Ecosyste.ms: Papers

10.1093/gigascience/giaa026

ShinyLearner: A containerized benchmarking tool for machine-learning classification of tabular data
Cited by: 13
Author(s): Stephen R. Piccolo, Terry J. Lee, Erica Suh, Kimball T Hill
Software Mentions: 21
Published: over 4 years ago

10.1038/s41598-019-55984-0

Patterns of diverse gene functions in genomic neighborhoods predict gene function and phenotype
Cited by: 16
Author(s): Matej Mihelčić, Tomislav Šmuc, Fran Supek
Software Mentions: 9
Published: almost 5 years ago

10.1186/1471-2164-15-S7-S4

SNPs selection using support vector regression and genetic algorithms in GWAS
Cited by: 11
Author(s): Fabrízzio Condé de Oliveira, Carlos Cristiano Hasenclever Borges, Fernanda Nascimento Almeida, Fabyano Fonseca e Silva, Rui da Silva Verneque, Marcos Vinícius Gualberto Barbosa da Silva, Wagner Arbex
Software Mentions: 5
Published: about 10 years ago

10.1186/s12864-016-3320-z

Stable feature selection based on the ensemble L 1 -norm support vector machine for biomarker discovery
Cited by: 29
Author(s): Myungjin Moon, Kenta Nakai
Software Mentions: 4
Published: almost 8 years ago

10.3390/genes9050258

The Cross-Entropy Based Multi-Filter Ensemble Method for Gene Selection
Cited by: 12
Author(s): Yingqiang Sun, Chengbo Lu, Xiaobo Li
Software Mentions: 3
Published: over 6 years ago

10.1371/journal.pone.0111187

MitProNet: A Knowledgebase and Analysis Platform of Proteome, Interactome and Diseases for Mammalian Mitochondria
Cited by: 5
Author(s): Jiabin Wang, Jian Yang, Song Mao, Xiaoqiang Chai, Yang‐Gen Hu, Xugang Hou, Yiheng Tang, Cheng Bi, Xiao Li
Software Mentions: 3
Published: about 10 years ago

10.1111/gcbb.12418

Predicting future biomass yield in<i>Miscanthus</i>using the carbohydrate metabolic profile as a biomarker
Cited by: 15
Author(s): Anne Maddison, Anyela Camargo-Rodriguez, Ian M. Scott, Cerys Jones, Dafydd Elias, Sarah Hawkins, Alice Massey, John Clifton‐Brown, Niall P. McNamara, Iain S. Donnison, Sarah Purdy
Software Mentions: 3
Published: almost 8 years ago

10.1186/1471-2105-16-S7-S5

Heterozygous genome assembly via binary classification of homologous sequence
Cited by: 13
Author(s): Paul Bodily, Mao Fujimoto, Cameron Ortega, Nozomu Okuda, Joseph Price, Mark J. Clement, Quinn Snell
Software Mentions: 3
Published: over 9 years ago

10.1371/journal.pone.0237972

Interactive machine learning for fast and robust cell profiling
Cited by: 1
Author(s): Lisa Laux, Marie F.A. Cutiongco, Nikolaj Gadegaard, Bjørn Sand Jensen
Software Mentions: 3
Published: about 4 years ago

10.1186/1471-2105-9-500

Prediction of glycosylation sites using random forests
Cited by: 194
Author(s): Stephen E. Hamby, Jonathan D. Hirst
Software Mentions: 2
Published: almost 16 years ago

10.1155/2020/8852258

Identification and Classification of Enhancers Using Dimension Reduction Technique and Recurrent Neural Network
Cited by: 8
Author(s): Qingwen Li, Lei Xu, Qingyuan Li, Lichao Zhang
Software Mentions: 2
Published: about 4 years ago

10.1186/s12938-015-0026-4

Identifying typical physical activity on smartphone with varying positions and orientations
Cited by: 43
Author(s): Fen Miao, Yi He, J Jinlei Liu, Yanjie Li, Ibi Idowu Ayoola
Software Mentions: 2
Published: over 9 years ago

10.1002/1878-0261.12767

Identification and validation of novel DNA methylation markers for early diagnosis of lung adenocarcinoma
Cited by: 17
Author(s): Miao Li, Chen Zhang, Lijun Zhou, Siyu Li, Yuan Cao, Longlong Wang, Rong Xiang, Yi Shi, Yongjun Piao
Software Mentions: 2
Published: about 4 years ago

10.3390/s17092064

A Novel Energy-Efficient Approach for Human Activity Recognition
Cited by: 26
Author(s): Zheng Li, Dihong Wu, Xiaoyang Ruan, Shaolin Weng, Ao Peng, Biyu Tang, Hai Lü, Haibin Shi, Huiru Zheng
Software Mentions: 2
Published: about 7 years ago

10.1186/1752-153X-4-S1-S4

CAESAR models for developmental toxicity
Cited by: 755
Author(s): Antonio Cassano, Alberto Manganaro, Todd M. Martin, Douglas Young, Nadège Piclin, Marco Pintore, Davide Bigoni, Emilio Benfenati
Software Mentions: 2
Published: over 14 years ago

10.1371/journal.pone.0003268

On Evaluating MHC-II Binding Peptide Prediction Methods
Cited by: 47
Author(s): Yasser EL-Manzalawy, Drena Dobbs, Vasant Honavar
Software Mentions: 1
Published: about 16 years ago

10.1371/journal.pone.0228931

The role of resting myocardial blood flow and myocardial blood flow reserve as a predictor of major adverse cardiovascular outcomes
Cited by: 22
Author(s): Marie Guerraty, Harish Rao, Venkatesh Y. Anjan, Hannah J. Szapary, David A. Mankoff, Daniel A. Pryma, Daniel J. Rader, Jacob Dubroff
Software Mentions: 1
Published: almost 5 years ago

10.1155/2012/346713

Influence of Expert-Dependent Variability over the Performance of Noninvasive Fibrosis Assessment in Patients with Chronic Hepatitis C by Means of Texture Analysis
Cited by: 6
Author(s): Cristian Vicas, M. Lupşor, Mihai Socaciu, Sergiu Nedevschi, Radu Badea
Software Mentions: 1
Published: almost 13 years ago

10.3389/fpls.2018.00519

Transcriptome-Wide Annotation of m5C RNA Modifications Using Machine Learning
Cited by: 42
Author(s): Jié Song, Jingjing Zhai, Enze Bian, Yujia Song, Jinxin Yu, Chuang Ma
Software Mentions: 1
Published: over 6 years ago

10.1186/2047-2501-3-S1-S4

Automatic detection of tweets reporting cases of influenza like illnesses in Australia
Cited by: 12
Author(s): Guido Zuccon, Sankalp Khanna, Anthony Nguyen, Justin Boyle, Matthew Hamlet, Cameron McCarthy
Software Mentions: 1
Published: over 9 years ago

10.3390/polym13101663

Development of Bioinspired Functional Chitosan/Cellulose Nanofiber 3D Hydrogel Constructs by 3D Printing for Application in the Engineering of Mechanically Demanding Tissues
Cited by: 30
Author(s): Arnaud Kamdem Tamo, Ingo Doench, Lukas Walter, Alexandra Montembault, Guillaume Sudre, Laurent David, Aliuska Morales Helguera, Mischa Selig, Bernd Rolauffs, Anke Bernstein, Daniel Hoenders, Andreas Walther, Anayancy Osorio‐Madrazo
Software Mentions: 1
Published: over 3 years ago

10.1038/srep39655

Identification of DEP domain-containing proteins by a machine learning method and experimental analysis of their expression in human HCC tissues
Cited by: 14
Author(s): Zhijun Liao, Xinrui Wang, Yeting Zeng, Quan Zou
Software Mentions: 1
Published: almost 8 years ago

10.1038/s41598-018-28105-6

Predicting the Enthalpy and Gibbs Energy of Sublimation by QSPR Modeling
Cited by: 14
Author(s): Nastaran Meftahi, Michael L. Walker, Marta Enciso, Brian J. Smith
Software Mentions: 1
Published: over 6 years ago

10.1155/2016/8309253

Prediction of G Protein-Coupled Receptors with SVM-Prot Features and Random Forest
Cited by: 34
Author(s): Zhijun Liao, Ying Ju, Quan Zou
Software Mentions: 1
Published: almost 9 years ago

10.3390/s19102266

Using Random Forests on Real-World City Data for Urban Planning in a Visual Semantic Decision Support System
Cited by: 6
Author(s): Nikolaos Sideris, Georgios Bardis, Athanasios Voulodimos, Georgios Miaoulis, Djamchid Ghazanfarpour
Software Mentions: 1
Published: over 5 years ago

10.1186/1471-2164-15-508

Identification of host-microbe interaction factors in the genomes of soft rot-associated pathogens Dickeya dadantii 3937 and Pectobacterium carotovorum WPP14 with supervised machine learning
Cited by: 13
Author(s): Bing Ma, Amy O. Charkowski, Jeremy D. Glasner, Nicole T. Perna
Software Mentions: 1
Published: almost 11 years ago

10.1186/1756-0381-6-16

LVQ-SMOTE – Learning Vector Quantization based Synthetic Minority Over–sampling Technique for biomedical data
Cited by: 87
Author(s): Mitsuhiko Nakamura, Yusuke Kajiwara, Atsushi Otsuka, Hitoshi Kimura
Software Mentions: 1
Published: about 11 years ago

10.6026/97320630015790

Data Mining Technology Enabled Anti Retroviral Therapy (ART) for HIV Positive Patients in Gondar University Hospital, Ethiopia
Cited by: 2
Author(s): Tamrat Delessa Chala
Software Mentions: 1
Published: almost 5 years ago

10.1186/s12938-019-0634-5

A pap-smear analysis tool (PAT) for detection of cervical cancer from pap-smear images
Cited by: 58
Author(s): Wasswa William, Andrew Ware, Annabella Habinka Basaza-Ejiri, Johnes Obungoloch
Software Mentions: 1
Published: almost 6 years ago

10.9734/BJMMR/2016/21601

Behavior Correlates of Post-Stroke Disability Using Data Mining and Infographics
Cited by: 4
Author(s): Sunmoo Yoon, José Gutierrez
Software Mentions: 1
Published: almost 9 years ago

10.1080/03009734.2020.1792010

Natural language processing and machine learning to enable automatic extraction and classification of patients’ smoking status from electronic medical records
Cited by: 15
Author(s): Andrea Caccamisi, Leif Jörgensen, Hercules Dalianis, Mats Rosenlund
Software Mentions: 1
Published: over 4 years ago

10.1371/journal.pone.0040654

Systems Biological Approach of Molecular Descriptors Connectivity: Optimal Descriptors for Oral Bioavailability Prediction
Cited by: 43
Author(s): Shiek S. S. J. Ahmed, Ramakrishnan Veerabathiran
Software Mentions: 1
Published: over 12 years ago

10.1371/journal.pone.0204644

Predictive classifier models built from natural products with antimalarial bioactivity using machine learning approach
Cited by: 24
Author(s): Samuel Egieyeh, James Syce, Sarel F. Malan, Alan Christoffels
Software Mentions: 1
Published: about 6 years ago

10.1371/journal.pone.0001742

Automated 3D Phenotype Analysis Using Data Mining
Cited by: 29
Author(s): Ilya Plyusnin, Alistair R. Evans, Aleksis Karme, Aristides Gionis, Jukka Jernvall
Software Mentions: 1
Published: over 16 years ago

10.1371/journal.pone.0048728

Efficient Prediction of Co-Complexed Proteins Based on Coevolution
Cited by: 8
Author(s): Damien M. de Vienne, Jérôme Azé
Software Mentions: 1
Published: about 12 years ago

10.1371/journal.pone.0182197

Schistosoma mansoni reinfection: Analysis of risk factors by classification and regression tree (CART) modeling
Cited by: 18
Author(s): Andréa Gazzinelli, Roberta Oliveira-Prado, Leonardo Ferreira Matoso, Bráulio M. Veloso, Gisele Nepomuceno de Andrade, Helmut Kloos, Jeffrey M. Bethony, Renato M. Assunção, Rodrigo Correa-Oliveira
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pone.0062216

Improved Method for Linear B-Cell Epitope Prediction Using Antigen’s Primary Sequence
Cited by: 255
Author(s): Harinder Singh, Hifzur Rahman Ansari, Gajendra P. S. Raghava
Software Mentions: 1
Published: over 11 years ago

10.1371/journal.pone.0051673

MiRmat: Mature microRNA Sequence Prediction
Cited by: 24
Author(s): HE Chen-feng, Yingxin Li, Guangxin Zhang, Zuguang Gu, Rong Yang, Jie Li, Zhi John Lu, Zhi‐Hua Zhou, Chenyu Zhang, Jin Wang
Software Mentions: 1
Published: almost 12 years ago

10.1371/journal.pone.0094554

Germline Variation in Cancer-Susceptibility Genes in a Healthy, Ancestrally Diverse Cohort: Implications for Individual Genome Sequencing
Cited by: 76
Author(s): Dale L. Bodian, Justine N. McCutcheon, Prachi Kothiyal, Kathi Huddleston, Ramaswamy K. Iyer, Joseph G. Vockley, John E. Niederhuber
Software Mentions: 1
Published: over 10 years ago

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Papers Mentioning weka 40