Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: pypi: weka
https://packages.ecosyste.ms/registries/pypi.org/packages/weka
A Python wrapper for the Weka data mining library.
13 versions
Latest release: about 2 years ago
151 downloads last month
Papers Mentioning weka 40
10.1093/gigascience/giaa026
ShinyLearner: A containerized benchmarking tool for machine-learning classification of tabular dataCited by: 13
Author(s): Stephen R. Piccolo, Terry J. Lee, Erica Suh, Kimball T Hill
Software Mentions: 21
Published: over 4 years ago
10.1038/s41598-019-55984-0
Patterns of diverse gene functions in genomic neighborhoods predict gene function and phenotypeCited by: 16
Author(s): Matej Mihelčić, Tomislav Šmuc, Fran Supek
Software Mentions: 9
Published: almost 5 years ago
10.1186/1471-2164-15-S7-S4
SNPs selection using support vector regression and genetic algorithms in GWASCited by: 11
Author(s): Fabrízzio Condé de Oliveira, Carlos Cristiano Hasenclever Borges, Fernanda Nascimento Almeida, Fabyano Fonseca e Silva, Rui da Silva Verneque, Marcos Vinícius Gualberto Barbosa da Silva, Wagner Arbex
Software Mentions: 5
Published: about 10 years ago
10.1186/s12864-016-3320-z
Stable feature selection based on the ensemble L 1 -norm support vector machine for biomarker discoveryCited by: 29
Author(s): Myungjin Moon, Kenta Nakai
Software Mentions: 4
Published: almost 8 years ago
10.3390/genes9050258
The Cross-Entropy Based Multi-Filter Ensemble Method for Gene SelectionCited by: 12
Author(s): Yingqiang Sun, Chengbo Lu, Xiaobo Li
Software Mentions: 3
Published: over 6 years ago
10.1371/journal.pone.0111187
MitProNet: A Knowledgebase and Analysis Platform of Proteome, Interactome and Diseases for Mammalian MitochondriaCited by: 5
Author(s): Jiabin Wang, Jian Yang, Song Mao, Xiaoqiang Chai, Yang‐Gen Hu, Xugang Hou, Yiheng Tang, Cheng Bi, Xiao Li
Software Mentions: 3
Published: about 10 years ago
10.1111/gcbb.12418
Predicting future biomass yield in<i>Miscanthus</i>using the carbohydrate metabolic profile as a biomarkerCited by: 15
Author(s): Anne Maddison, Anyela Camargo-Rodriguez, Ian M. Scott, Cerys Jones, Dafydd Elias, Sarah Hawkins, Alice Massey, John Clifton‐Brown, Niall P. McNamara, Iain S. Donnison, Sarah Purdy
Software Mentions: 3
Published: almost 8 years ago
10.1186/1471-2105-16-S7-S5
Heterozygous genome assembly via binary classification of homologous sequenceCited by: 13
Author(s): Paul Bodily, Mao Fujimoto, Cameron Ortega, Nozomu Okuda, Joseph Price, Mark J. Clement, Quinn Snell
Software Mentions: 3
Published: over 9 years ago
10.1371/journal.pone.0237972
Interactive machine learning for fast and robust cell profilingCited by: 1
Author(s): Lisa Laux, Marie F.A. Cutiongco, Nikolaj Gadegaard, Bjørn Sand Jensen
Software Mentions: 3
Published: about 4 years ago
10.1186/1471-2105-9-500
Prediction of glycosylation sites using random forestsCited by: 194
Author(s): Stephen E. Hamby, Jonathan D. Hirst
Software Mentions: 2
Published: almost 16 years ago
10.1155/2020/8852258
Identification and Classification of Enhancers Using Dimension Reduction Technique and Recurrent Neural NetworkCited by: 8
Author(s): Qingwen Li, Lei Xu, Qingyuan Li, Lichao Zhang
Software Mentions: 2
Published: about 4 years ago
10.1186/s12938-015-0026-4
Identifying typical physical activity on smartphone with varying positions and orientationsCited by: 43
Author(s): Fen Miao, Yi He, J Jinlei Liu, Yanjie Li, Ibi Idowu Ayoola
Software Mentions: 2
Published: over 9 years ago
10.1002/1878-0261.12767
Identification and validation of novel DNA methylation markers for early diagnosis of lung adenocarcinomaCited by: 17
Author(s): Miao Li, Chen Zhang, Lijun Zhou, Siyu Li, Yuan Cao, Longlong Wang, Rong Xiang, Yi Shi, Yongjun Piao
Software Mentions: 2
Published: about 4 years ago
10.3390/s17092064
A Novel Energy-Efficient Approach for Human Activity RecognitionCited by: 26
Author(s): Zheng Li, Dihong Wu, Xiaoyang Ruan, Shaolin Weng, Ao Peng, Biyu Tang, Hai Lü, Haibin Shi, Huiru Zheng
Software Mentions: 2
Published: about 7 years ago
10.1186/1752-153X-4-S1-S4
CAESAR models for developmental toxicityCited by: 755
Author(s): Antonio Cassano, Alberto Manganaro, Todd M. Martin, Douglas Young, Nadège Piclin, Marco Pintore, Davide Bigoni, Emilio Benfenati
Software Mentions: 2
Published: over 14 years ago
10.1371/journal.pone.0003268
On Evaluating MHC-II Binding Peptide Prediction MethodsCited by: 47
Author(s): Yasser EL-Manzalawy, Drena Dobbs, Vasant Honavar
Software Mentions: 1
Published: about 16 years ago
10.1371/journal.pone.0228931
The role of resting myocardial blood flow and myocardial blood flow reserve as a predictor of major adverse cardiovascular outcomesCited by: 22
Author(s): Marie Guerraty, Harish Rao, Venkatesh Y. Anjan, Hannah J. Szapary, David A. Mankoff, Daniel A. Pryma, Daniel J. Rader, Jacob Dubroff
Software Mentions: 1
Published: over 4 years ago
10.1155/2012/346713
Influence of Expert-Dependent Variability over the Performance of Noninvasive Fibrosis Assessment in Patients with Chronic Hepatitis C by Means of Texture AnalysisCited by: 6
Author(s): Cristian Vicas, M. Lupşor, Mihai Socaciu, Sergiu Nedevschi, Radu Badea
Software Mentions: 1
Published: almost 13 years ago
10.3389/fpls.2018.00519
Transcriptome-Wide Annotation of m5C RNA Modifications Using Machine LearningCited by: 42
Author(s): Jié Song, Jingjing Zhai, Enze Bian, Yujia Song, Jinxin Yu, Chuang Ma
Software Mentions: 1
Published: over 6 years ago
10.1186/2047-2501-3-S1-S4
Automatic detection of tweets reporting cases of influenza like illnesses in AustraliaCited by: 12
Author(s): Guido Zuccon, Sankalp Khanna, Anthony Nguyen, Justin Boyle, Matthew Hamlet, Cameron McCarthy
Software Mentions: 1
Published: over 9 years ago
10.3390/polym13101663
Development of Bioinspired Functional Chitosan/Cellulose Nanofiber 3D Hydrogel Constructs by 3D Printing for Application in the Engineering of Mechanically Demanding TissuesCited by: 30
Author(s): Arnaud Kamdem Tamo, Ingo Doench, Lukas Walter, Alexandra Montembault, Guillaume Sudre, Laurent David, Aliuska Morales Helguera, Mischa Selig, Bernd Rolauffs, Anke Bernstein, Daniel Hoenders, Andreas Walther, Anayancy Osorio‐Madrazo
Software Mentions: 1
Published: over 3 years ago
10.1038/srep39655
Identification of DEP domain-containing proteins by a machine learning method and experimental analysis of their expression in human HCC tissuesCited by: 14
Author(s): Zhijun Liao, Xinrui Wang, Yeting Zeng, Quan Zou
Software Mentions: 1
Published: almost 8 years ago
10.1038/s41598-018-28105-6
Predicting the Enthalpy and Gibbs Energy of Sublimation by QSPR ModelingCited by: 14
Author(s): Nastaran Meftahi, Michael L. Walker, Marta Enciso, Brian J. Smith
Software Mentions: 1
Published: over 6 years ago
10.1155/2016/8309253
Prediction of G Protein-Coupled Receptors with SVM-Prot Features and Random ForestCited by: 34
Author(s): Zhijun Liao, Ying Ju, Quan Zou
Software Mentions: 1
Published: almost 9 years ago
10.3390/s19102266
Using Random Forests on Real-World City Data for Urban Planning in a Visual Semantic Decision Support SystemCited by: 6
Author(s): Nikolaos Sideris, Georgios Bardis, Athanasios Voulodimos, Georgios Miaoulis, Djamchid Ghazanfarpour
Software Mentions: 1
Published: over 5 years ago
10.1186/1471-2164-15-508
Identification of host-microbe interaction factors in the genomes of soft rot-associated pathogens Dickeya dadantii 3937 and Pectobacterium carotovorum WPP14 with supervised machine learningCited by: 13
Author(s): Bing Ma, Amy O. Charkowski, Jeremy D. Glasner, Nicole T. Perna
Software Mentions: 1
Published: almost 11 years ago
10.1186/1756-0381-6-16
LVQ-SMOTE – Learning Vector Quantization based Synthetic Minority Over–sampling Technique for biomedical dataCited by: 87
Author(s): Mitsuhiko Nakamura, Yusuke Kajiwara, Atsushi Otsuka, Hitoshi Kimura
Software Mentions: 1
Published: about 11 years ago
10.6026/97320630015790
Data Mining Technology Enabled Anti Retroviral Therapy (ART) for HIV Positive Patients in Gondar University Hospital, EthiopiaCited by: 2
Author(s): Tamrat Delessa Chala
Software Mentions: 1
Published: almost 5 years ago
10.1186/s12938-019-0634-5
A pap-smear analysis tool (PAT) for detection of cervical cancer from pap-smear imagesCited by: 58
Author(s): Wasswa William, Andrew Ware, Annabella Habinka Basaza-Ejiri, Johnes Obungoloch
Software Mentions: 1
Published: over 5 years ago
10.9734/BJMMR/2016/21601
Behavior Correlates of Post-Stroke Disability Using Data Mining and InfographicsCited by: 4
Author(s): Sunmoo Yoon, José Gutierrez
Software Mentions: 1
Published: almost 9 years ago
10.1080/03009734.2020.1792010
Natural language processing and machine learning to enable automatic extraction and classification of patients’ smoking status from electronic medical recordsCited by: 15
Author(s): Andrea Caccamisi, Leif Jörgensen, Hercules Dalianis, Mats Rosenlund
Software Mentions: 1
Published: over 4 years ago
10.1371/journal.pone.0040654
Systems Biological Approach of Molecular Descriptors Connectivity: Optimal Descriptors for Oral Bioavailability PredictionCited by: 43
Author(s): Shiek S. S. J. Ahmed, Ramakrishnan Veerabathiran
Software Mentions: 1
Published: over 12 years ago
10.1371/journal.pone.0204644
Predictive classifier models built from natural products with antimalarial bioactivity using machine learning approachCited by: 24
Author(s): Samuel Egieyeh, James Syce, Sarel F. Malan, Alan Christoffels
Software Mentions: 1
Published: about 6 years ago
10.1371/journal.pone.0001742
Automated 3D Phenotype Analysis Using Data MiningCited by: 29
Author(s): Ilya Plyusnin, Alistair R. Evans, Aleksis Karme, Aristides Gionis, Jukka Jernvall
Software Mentions: 1
Published: over 16 years ago
10.1371/journal.pone.0048728
Efficient Prediction of Co-Complexed Proteins Based on CoevolutionCited by: 8
Author(s): Damien M. de Vienne, Jérôme Azé
Software Mentions: 1
Published: about 12 years ago
10.1371/journal.pone.0182197
Schistosoma mansoni reinfection: Analysis of risk factors by classification and regression tree (CART) modelingCited by: 18
Author(s): Andréa Gazzinelli, Roberta Oliveira-Prado, Leonardo Ferreira Matoso, Bráulio M. Veloso, Gisele Nepomuceno de Andrade, Helmut Kloos, Jeffrey M. Bethony, Renato M. Assunção, Rodrigo Correa-Oliveira
Software Mentions: 1
Published: about 7 years ago
10.1371/journal.pone.0062216
Improved Method for Linear B-Cell Epitope Prediction Using Antigen’s Primary SequenceCited by: 255
Author(s): Harinder Singh, Hifzur Rahman Ansari, Gajendra P. S. Raghava
Software Mentions: 1
Published: over 11 years ago
10.1371/journal.pone.0051673
MiRmat: Mature microRNA Sequence PredictionCited by: 24
Author(s): HE Chen-feng, Yingxin Li, Guangxin Zhang, Zuguang Gu, Rong Yang, Jie Li, Zhi John Lu, Zhi‐Hua Zhou, Chenyu Zhang, Jin Wang
Software Mentions: 1
Published: almost 12 years ago
10.1371/journal.pone.0094554
Germline Variation in Cancer-Susceptibility Genes in a Healthy, Ancestrally Diverse Cohort: Implications for Individual Genome SequencingCited by: 76
Author(s): Dale L. Bodian, Justine N. McCutcheon, Prachi Kothiyal, Kathi Huddleston, Ramaswamy K. Iyer, Joseph G. Vockley, John E. Niederhuber
Software Mentions: 1
Published: over 10 years ago