Ecosyste.ms: Papers

10.3389/fnmol.2021.664912

Environmental Enrichment Induces Epigenomic and Genome Organization Changes Relevant for Cognition
Cited by: 9
Author(s): Sergio Espeso‐Gil, Aliaksei Z. Holik, Sarah Bonnin, Shalu Jhanwar, Sandhya Chandrasekaran, Roger Piqué-Regi, Júlia Albaigès-Ràfols, Michael P. Maher, Jon Permanyer, Manuel Irimia, Marc R. Friedländer, Meritxell Pons-Espinal, Schahram Akbarian, Mara Dierssen, Philipp G. Maass, Charlotte N. Hor, Stephan Ossowski
Software Mentions: 9
Published: over 3 years ago

10.1186/s13059-021-02372-5

Dynamics of alternative splicing during somatic cell reprogramming reveals functions for RNA-binding proteins CPSF3, hnRNP UL1, and TIA1
Cited by: 11
Author(s): Claudia Vivori, Panagiotis Papasaikas, Ralph Stadhouders, Bruno Di Stefano, Anna Ribó Rubio, Clara Berenguer Balaguer, Serena Francesca Generoso, Anna Mallol, José Luis Sardina, Bernhard Payer, Thomas Graf, Juan Valcárcel
Software Mentions: 7
Published: over 3 years ago

10.7554/eLife.16797

Conserved functional antagonism of CELF and MBNL proteins controls stem cell-specific alternative splicing in planarians
Cited by: 46
Author(s): Jordi Solana, Manuel Irimia, Salah Ayoub, Marta Rodriguez Orejuela, Vera Zywitza, Marvin Jens, Javier Tapial, Debashish Ray, Quaid Morris, Timothy R. Hughes, Benjamin J. Blencowe, Nikolaus Rajewsky
Software Mentions: 6
Published: over 8 years ago

10.1371/journal.pgen.1007828

The Integrator complex regulates differential snRNA processing and fate of adult stem cells in the highly regenerative planarian Schmidtea mediterranea
Cited by: 13
Author(s): David Schmidt, Hanna Reuter, Katja Hüttner, Larissa Ruhe, Franziska Rabert, Florian Seebeck, Manuel Irimia, Jordi Solana, Kerstin Bartscherer
Software Mentions: 5
Published: almost 6 years ago

10.1186/s12864-019-5572-x

Differential isoform expression and alternative splicing in sex determination in mice
Cited by: 21
Author(s): Benjamín Planells, Isabel Gómez-Redondo, Eva Pericuesta, Patrick Lonergan, Alfonso Gutiérrez‐Adán
Software Mentions: 4
Published: over 5 years ago

10.1186/s13059-021-02441-9

ExOrthist: a tool to infer exon orthologies at any evolutionary distance
Cited by: 7
Author(s): Yamile Márquez, Federica Mantica, Luca Cozzuto, Demián Burguera, Toni Hermoso Pulido, Julia Ponomarenko, Scott William Roy, Manuel Irimia
Software Mentions: 3
Published: over 3 years ago

10.15252/embj.2018101244

A slow transcription rate causes embryonic lethality and perturbs kinetic coupling of neuronal genes
Cited by: 42
Author(s): Magdalena M. Maslon, Ulrich Braunschweig, Stuart Aitken, Abigail Mann, Fiona Kilanowski, Chris Hunter, Benjamin J. Blencowe, Alberto R. Kornblihtt, Ian R. Adams, Javier F. Cáceres
Software Mentions: 2
Published: over 5 years ago