Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: pypi: updog
https://packages.ecosyste.ms/registries/pypi.org/packages/updog
Updog is a replacement for Python's SimpleHTTPServer. It allows uploading and downloading via HTTP/S, can set ad hoc SSL certificates and use http basic auth.
5 versions
Latest release: over 4 years ago
1,737 downloads last month
Papers Mentioning updog 10
10.1007/s00122-021-03834-x
Using probabilistic genotypes in linkage analysis of polyploidsCited by: 2
Author(s): Yanlin Liao, Roeland E. Voorrips, Peter M. Bourke, Giorgio Tumino, Paul Arens, R.G.F. Visser, M.J.M. Smulders, Chris Maliepaard
Software Mentions: 7
Published: over 3 years ago
10.1534/g3.118.200913
polyRAD: Genotype Calling with Uncertainty from Sequencing Data in Polyploids and DiploidsCited by: 59
Author(s): Lindsay V. Clark, Alexander E. Lipka, Erik J. Sacks
Software Mentions: 7
Published: over 5 years ago
10.1534/g3.118.200986
Genomic Selection with Allele Dosage in <i>Panicum maximum</i> Jacq.Cited by: 34
Author(s): Letícia Aparecida de Castro Lara, M. F. Santos, Liana Jank, Lucimara Chiari, Mariane de Mendonça Vilela, Rodrigo R. Amadeu, José Fortunato Ferreira Santos, Guilherme da Silva Pereira, Zhao‐Bang Zeng, Antônio Augusto Franco Garcia
Software Mentions: 6
Published: about 5 years ago
10.3390/pathogens9110967
QTL Mapping for Resistance to Cankers Induced by Pseudomonas syringae pv. actinidiae (Psa) in a Tetraploid Actinidia chinensis Kiwifruit PopulationCited by: 10
Author(s): Jibran Tahir, Cyril Brendolise, S.M. Hoyte, Marielle Lucas, Susan Thomson, Kirsten Hoeata, Catherine McKenzie, Andrew Wotton, Keith A. Funnell, E.R. Morgan, Duncan Hedderley, David Chagné, Peter M. Bourke, John McCallum, Susan E. Gardiner, L. D. Gea
Software Mentions: 5
Published: almost 4 years ago
10.1186/s12859-019-2703-y
FitTetra 2.0 – improved genotype calling for tetraploids with multiple population and parental data supportCited by: 32
Author(s): Konrad Zych, Gerrit Gort, Chris Maliepaard, Ritsert C. Jansen, Roeland E. Voorrips
Software Mentions: 4
Published: over 5 years ago
10.3389/fpls.2021.676326
Genomic Selection in an Outcrossing Autotetraploid Fruit Crop: Lessons From Blueberry BreedingCited by: 18
Author(s): Luís Felipe Ventorim Ferrão, Rodrigo R. Amadeu, Juliana Benevenuto, Ivone de Bem Oliveira, Patricio Muñoz
Software Mentions: 4
Published: over 3 years ago
10.3389/fpls.2020.00025
Exploring Deep Learning for Complex Trait Genomic Prediction in Polyploid Outcrossing SpeciesCited by: 71
Author(s): Laura M. Zingaretti, Salvador A. Gezan, Luís Felipe Ventorim Ferrão, Luis F. Osorio, Amparo Monfort, Patricio Muñoz, Vance M. Whitaker, Miguel Pérez‐Enciso
Software Mentions: 4
Published: over 4 years ago
10.3389/fpls.2020.00015
High-Resolution Linkage Map With Allele Dosage Allows the Identification of Regions Governing Complex Traits and Apospory in Guinea Grass (Megathyrsus maximus)Cited by: 14
Author(s): Thamiris Gatti Déo, Rita Ferreira, Letícia A. C. Lara, Aline Costa Lima Moraes, Alessandro Alves‐Pereira, Fabrício Augusto de Oliveira, Antônio Augusto Franco Garcia, M. F. Santos, Liana Jank, Anete Pereira de Souza
Software Mentions: 3
Published: over 4 years ago
10.1534/g3.120.401433
Genetic Mapping in Autohexaploid Sweet Potato with Low-Coverage NGS-Based Genotyping DataCited by: 12
Author(s): Eiji Yamamoto, Kenta Shirasawa, T. Kimura, Yuki Monden, Masaru Tanaka, Sachiko Isobe
Software Mentions: 3
Published: about 4 years ago
10.1002/ece3.7572
MultiGWAS: An integrative tool for Genome Wide Association Studies in tetraploid organismsCited by: 4
Author(s): Luis Garreta, Ivania Cerón‐Souza, Manfred Ricardo Palacio, Paula H. Reyes-Herrera
Software Mentions: 3
Published: over 3 years ago