Projects: pypi: trackpy
https://packages.ecosyste.ms/registries/pypi.org/packages/trackpy
particle-tracking toolkit
32 versions
Latest release: almost 3 years ago
15 dependent packages
2,141 downloads last month
Enhanced Analysis
Educational Contributors:
nkeim@calpoly.edu
nkeim@seas.upenn.edu
tcaswell@uchicago.edu
keim@psu.edu
dallan@pha.jhu.edu
pfigliozzi@uchicago.edu
sean.freeman@colostate.edu
schrangl@iap.tuwien.ac.at
Repository Activity:
Repository Owner:
Soft Matter (organization)
Code useful for doing soft-matter research Academic
Code useful for doing soft-matter research Academic
README Analysis:
Science Score: 100/100
Starting Score: 100 points
Bonuses:
-
+160
Educational commit emails
8 contributors with educational email addresses -
+20
Academic repository owner
Repository owned by academic institution -
+15
Institutional repository owner
Repository owned by research institution -
+2
Science terms in README
1 scientific terms found in README
Penalties:
-
-10
PyPI ecosystem
General-purpose ecosystem -
-15
No science keywords
No scientific terms found in keywords/classifiers -
-10
No science terms in description
No scientific terms found in description -
-25
Non-science indicators
1 non-scientific terms found
Very Likely Science (100)
Papers Mentioning trackpy 13
10.3390/cells10082013
ChroMo, an Application for Unsupervised Analysis of Chromosome Movements in MeiosisCited by: 0
Author(s): Daniel León-Periñán, Alfonso Fernández-Álvarez
Software Mentions: 17
Published: over 4 years ago
10.7554/eLife.51085
CytoCensus, mapping cell identity and division in tissues and organs using machine learningCited by: 12
Author(s): Martin Hailstone, Dominic Waithe, Tamsin J Samuels, Yang Lu, Ita Costello, Yoav Arava, Elizabeth J. Robertson, Richard M. Parton, Ilan Davis
Software Mentions: 6
Published: over 5 years ago
10.7554/eLife.48063
Initiation of chromosome replication controls both division and replication cycles in E. coli through a double-adder mechanismCited by: 44
Author(s): Guillaume Witz, Erik van Nimwegen, Thomas Julou
Software Mentions: 6
Published: over 6 years ago
10.1242/jcs.230714
Anterior-enriched filopodia create appearance of asymmetric membrane microdomains in polarizing<i>C. elegans</i>zygotesCited by: 13
Author(s): Nisha Hirani, Rukshala Illukkumbura, Tom Bland, Grégoire Mathonnet, Delphine Suhner, Anne-Cécile Reymann, Nathan W. Goehring
Software Mentions: 3
Published: about 7 years ago
10.3390/v13030386
A New Generation of Functional Tagged Proteins for HIV Fluorescence ImagingCited by: 6
Author(s): João I. Mamede, Joseph P. Griffin, Stéphanie Gambut, Thomas J. Hope
Software Mentions: 2
Published: almost 5 years ago
10.1016/j.csbj.2021.07.004
PySTACHIO: Python Single-molecule TrAcking stoiCHiometry Intensity and simulatiOn, a flexible, extensible, beginner-friendly and optimized program for analysis of single-molecule microscopy dataCited by: 12
Author(s): Jack W Shepherd, Edward Higgins, Adam J. M. Wollman, Mark C. Leake
Software Mentions: 2
Published: about 5 years ago
10.1128/AEM.01193-20
Differential Effects of Heated Perfusate on Morphology, Viability, and Dissemination of Staphylococcus epidermidis BiofilmsCited by: 5
Author(s): Joanne K. Beckwith, J. Scott VanEpps, Michael J. Solomon
Software Mentions: 1
Published: over 5 years ago
10.3390/ijms21093035
Heterogeneity of Integrin αIIbβ3 Function in Pediatric Immune Thrombocytopenia Revealed by Continuous Flow Cytometry AnalysisCited by: 13
Author(s): A. A. Martyanov, Д. С. Морозова, Maria Sorokina, Aleksandra A. Filkova, Д. В. Федорова, Selima Sh. Uzueva, Е.В. Сунцова, Galina Novichkova, П. А. Жарков, Mikhail A. Panteleev, Anastasia N. Sveshnikova
Software Mentions: 1
Published: almost 6 years ago
10.1007/s10237-020-01329-0
A two-layer elasto-visco-plastic rheological model for the material parameter identification of bone tissueCited by: 6
Author(s): Andreas Reisinger, Martin Frank, Philipp J. Thurner, Dieter H. Pahr
Software Mentions: 1
Published: almost 6 years ago
10.1364/BOE.10.005611
Multi-plane remote refocusing epifluorescence microscopy to image dynamic Ca<i/><sup>2+</sup>eventsCited by: 1
Author(s): Penelope F. Lawton, Charlotte Buckley, Christopher D. Saunter, Calum Wilson, Alexander D. Corbett, Patrick S. Salter, John G. McCarron, John M. Girkin
Software Mentions: 1
Published: over 6 years ago
10.3390/mi11040351
2D Spatially-Resolved Depth-Section Microfluidic Flow Velocimetry Using Dual Beam OCTCited by: 0
Author(s): J. M. Hallam, Evangelos Rigas, Thomas O. H. Charrett, Ralph P. Tatam
Software Mentions: 1
Published: almost 6 years ago
10.1016/j.cub.2019.04.058
Regulated Activation of the PAR Polarity Network Ensures a Timely and Specific Response to Spatial CuesCited by: 45
Author(s): Jacob D. Reich, Lars Hubatsch, Rukshala Illukkumbura, Florent Péglion, Tom Bland, Nisha Hirani, Nathan W. Goehring
Software Mentions: 1
Published: over 6 years ago
10.3389/fbioe.2018.00017
A Novel Methodology for Characterizing Cell Subpopulations in Automated Time-lapse MicroscopyCited by: 6
Author(s): Georges Hattab, Veit Wiesmann, Anke Becker, Tamara Munzner, Tim Wilhelm Nattkemper
Software Mentions: 1
Published: almost 8 years ago