Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: pypi: tool

https://packages.ecosyste.ms/registries/pypi.org/packages/tool

A compact modular conf/web/console framework.
10 versions
Latest release: almost 13 years ago
1,324 downloads last month

Papers Mentioning tool 293

10.1186/s13643-019-1226-y
The impact of later eating rhythm on childhood adiposity: protocol for a systematic review
Cited by: 2
Author(s): Mengxuan Zou, Kate Northstone, Rachel Perry, Laura Johnson, Sam D Leary
Software Mentions: 2
Published: almost 5 years ago
10.3389/fmicb.2020.01588
The Isolation and Genome Sequencing of Five Novel Bacteriophages From the Rumen Active Against Butyrivibrio fibrisolvens
Cited by: 3
Author(s): Jessica C. A. Friedersdorff, Alison H. Kingston‐Smith, Justin A. Pachebat, Alan Cookson, David Rooke, Christopher J. Creevey
Software Mentions: 2
Published: over 4 years ago
10.3389/fmicb.2019.00982
Green Infrastructure Design Influences Communities of Urban Soil Bacteria
Cited by: 34
Author(s): Jessica Joyner, Jordan Kerwin, Maha Deeb, George Lozefski, Bharath Prithiviraj, Anna Paltseva, John L. McLaughlin, Peter M. Groffman, Zhongqi Cheng, Theodore R. Muth
Software Mentions: 2
Published: over 5 years ago
10.1155/2021/6158275
Effect of Acupuncture on Cognitive Function of Insomnia Patients Compared with Drugs: A Protocol for Meta-analysis and Systematic Review
Cited by: 0
Author(s): Shan Qin, Jing Jiang, Wei Wu, Xiaoqiu Wang, Hanqing Xi, Qin-Qin Fang, Bin Xu, Chengyong Liu
Software Mentions: 2
Published: about 3 years ago
10.3389/fmicb.2019.00287
Exploring Evolutionary and Transmission Dynamics of HIV Epidemic in Serbia: Bridging Socio-Demographic With Phylogenetic Approach
Cited by: 8
Author(s): Luka Jovanović, Marina Šiljić, Valentina Ćirković, Dubravka Salemović, Ivana Pešić-Pavlović, Marija Todorović, Jovan Ranin, Djordje Jevtović, Maja Stanojević
Software Mentions: 2
Published: over 5 years ago
10.1186/s12014-019-9228-2
Rapid detection of colistin resistance protein MCR-1 by LC–MS/MS
Cited by: 11
Author(s): Honghui Wang, Yong Chen, Jeffrey R Strich, Steven K. Drake, Jung Ho Youn, Avi Z. Rosenberg, Marjan Guček, Patrick T. McGann, Anthony F. Suffredini, John P. Dekker
Software Mentions: 2
Published: over 5 years ago
10.7150/thno.31502
A Comprehensive Study of Vesicular and Non-Vesicular miRNAs from a Volume of Cerebrospinal Fluid Compatible with Clinical Practice
Cited by: 16
Author(s): Endika Prieto-Fernández, Ana M. Aransay, Félix Royo, Esperanza González, Juan José Lozano, Borja Santos-Zorrozúa, Nuria Macías-Cámara, Monika González, Raquel Pérez Garay, Javier Benito, África García-Orad, Juan Manuel Falcón‐Pérez
Software Mentions: 2
Published: almost 6 years ago
10.18332/tid/131199
Characterizing and assessing compliance of online vendors to the state of Massachusetts ENDS product sales ban
Cited by: 5
Author(s): Matthew Nali, Vidya Purushothaman, Qing Xu, Raphael Cuomo, Tim K. Mackey
Software Mentions: 2
Published: almost 4 years ago
10.3390/microorganisms8071002
A Genome-Scale Metabolic Model of 2,3-Butanediol Production by Thermophilic Bacteria Geobacillus icigianus
Cited by: 9
Author(s): Mikhail Kulyashov, S. E. Peltek, Ilya R. Akberdin
Software Mentions: 2
Published: over 4 years ago
10.7717/peerj.11713
Interventions to improve the well-being of family caregivers of patients on hemodialysis and peritoneal dialysis: a systematic review
Cited by: 5
Author(s): Ana Carolina de Andrade Hovadick, Viviane Rodrigues Jardim, Constança Paúl, Adriana Pagano, Ilka Afonso Reis, Heloísa de Carvalho Torres
Software Mentions: 2
Published: over 3 years ago
10.1523/ENEURO.0476-19.2020
<i>In Vivo</i>Diffusion Tensor Imaging in Acute and Subacute Phases of Mild Traumatic Brain Injury in Rats
Cited by: 13
Author(s): Isabel San Martín Molina, Raimo A. Salo, Ali Abdollahzadeh, Jussi Tohka, Olli Gröhn, Alejandra Sierra
Software Mentions: 2
Published: over 4 years ago
10.1186/s12960-018-0293-9
Migration motives and integration of international human resources of health in the United Kingdom: systematic review and meta-synthesis of qualitative studies using framework analysis
Cited by: 27
Author(s): Latha S Davda, Jennifer E. Gallagher, David R. Radford
Software Mentions: 2
Published: over 6 years ago
10.1155/2014/730814
BLAT-Based Comparative Analysis for Transposable Elements: BLATCAT
Cited by: 0
Author(s): Sang-Bum Lee, Sumin Oh, Keunsoo Kang, Kyudong Han
Software Mentions: 2
Published: almost 11 years ago
10.1007/s00384-021-03891-0
A global systematic review and meta-analysis on laparoscopic vs open right hemicolectomy with complete mesocolic excision
Cited by: 12
Author(s): Gabriele Anania, Alberto Arezzo, Richard J. Davies, Francesco Marchetti, Shu Zhang, Salomone Di Saverio, Roberto Cirocchi, Annibale Donini
Software Mentions: 2
Published: over 3 years ago
10.1016/j.cortex.2016.03.013
The tract terminations in the temporal lobe: Their location and associated functions
Cited by: 47
Author(s): Claude J. Bajada, Hamied A. Haroon, Hojjatollah Azadbakht, Geoffrey Parker, Matthew A. Lambon Ralph, Lauren Cloutman
Software Mentions: 2
Published: almost 7 years ago
10.1074/mcp.RA120.002071
Kir2.1 Interactome Mapping Uncovers PKP4 as a Modulator of the Kir2.1-Regulated Inward Rectifier Potassium Currents
Cited by: 14
Author(s): Sung Soo Park, Daniela Ponce-Balbuena, Rork Kuick, Guadalupe Guerrero-Serna, Justin Yoon, Dattatreya Mellacheruvu, Kevin Conlon, Venkatesha Basrur, Alexey I. Nesvizhskii, José Jalife, Jean François Rual
Software Mentions: 2
Published: about 4 years ago
10.1016/j.dib.2019.103829
Potential of cereal-based agricultural residues available for bioenergy production
Cited by: 17
Author(s): Lisandra Rocha‐Meneses, Thaisa Bergamo, Timo Kikas
Software Mentions: 2
Published: over 5 years ago
10.2196/medinform.9171
Automated Modular Magnetic Resonance Imaging Clinical Decision Support System (MIROR): An Application in Pediatric Cancer Diagnosis
Cited by: 6
Author(s): Niloufar Zarinabad, Emma M. Meeus, Karen Manias, Katharine Foster, Andrew C. Peet
Software Mentions: 2
Published: over 6 years ago
10.1093/database/bau127
CyanOmics: an integrated database of omics for the model cyanobacterium Synechococcus sp. PCC 7002
Cited by: 15
Author(s): Yaohua Yang, Jie Feng, Tao Li, Feng Ge, Jindong Zhao
Software Mentions: 2
Published: almost 10 years ago
10.1155/2021/5568724
Identification of Inflammatory Genes, Pathways, and Immune Cells in Necrotizing Enterocolitis of Preterm Infant by Bioinformatics Approaches
Cited by: 2
Author(s): Lili Zhang, Lianfeng Sun, Mingli Wu, Jie Huang
Software Mentions: 2
Published: over 3 years ago
10.1242/dmm.031773
Systemic HIV-1 infection produces a unique glial footprint in humanized mouse brains
Cited by: 16
Author(s): Weizhe Li, Santhi Gorantla, Howard Eliot Gendelman, Larisa Y. Poluektova
Software Mentions: 2
Published: almost 8 years ago
10.5935/1518-0557.20200099
Embryo Culture Media Influence on Live Birth Rate and Birthweight after IVF/ICSI: A Systematic Review Comparing Vitrolife G5 Media to Other Common Culture Media
Cited by: 0
Author(s): Lena Bick, Anja Schulz Nielsen, Ulla Breth Knudsen
Software Mentions: 2
Published: almost 4 years ago
10.1371/journal.pone.0242496
Percutaneous Chevron/Akin (PECA) versus open scarf/Akin (SA) osteotomy treatment for hallux valgus: A systematic review and meta-analysis
Cited by: 11
Author(s): Gabriel Ferraz Ferreira, Vinícius Quadros Borges, Leonardo Moraes, Kelly Cristina Stéfani
Software Mentions: 2
Published: almost 4 years ago
10.1002/acm2.13200
Toward automation of initial chart check for photon/electron EBRT: the clinical implementation of new AAPM task group reports and automation techniques
Cited by: 3
Author(s): Huijun Xu, Baoshe Zhang, Mariana Guerrero, Sung‐Woo Lee, Narottam Lamichhane, Shifeng Chen, B Yi
Software Mentions: 2
Published: over 3 years ago
10.3390/ijms151017601
Hope for GWAS: Relevant Risk Genes Uncovered from GWAS Statistical Noise
Cited by: 2
Author(s): Catarina Correia, Yoan Diekmann, Astrid M. Vicente, José B. Pereira-Leal
Software Mentions: 2
Published: about 10 years ago
10.1186/s12864-019-6123-1
Comparative genomic analysis of the Hafnia genus reveals an explicit evolutionary relationship between the species alvei and paralvei and provides insights into pathogenicity
Cited by: 19
Author(s): Zhiqiu Yin, Chao Yuan, Yuhui Du, Yang Pan, Chengqian Qian, Wei Yi, Si Zhang, Di Huang, Bin Liu
Software Mentions: 2
Published: about 5 years ago
10.1371/journal.pone.0243135
A GIS-based policy support tool to determine national responsibilities and priorities for biodiversity conservation
Cited by: 0
Author(s): Yu‐Pin Lin, Dirk S. Schmeller, Tzung‐Su Ding, Yung-Chieh Wang, Wan‐Ching Lien, Klaus Henle, Reinhard Klenke
Software Mentions: 2
Published: almost 4 years ago
10.1093/gigascience/giy143
The genome of an underwater architect, the caddisfly<i>Stenopsyche tienmushanensis</i>Hwang (Insecta: Trichoptera)
Cited by: 37
Author(s): Shiqi Luo, Min Tang, Paul B. Frandsen, Russell J. Stewart, Xin Zhou
Software Mentions: 2
Published: almost 6 years ago
10.1186/s13195-021-00831-6
Anticancer drugs repurposed for Alzheimer’s disease: a systematic review
Cited by: 12
Author(s): Antonio Ancidoni, Ilaria Bacigalupo, Giulia Remoli, Eleonora Lacorte, Paola Piscopo, Giulia Sarti, Massimo Corbo, Nicola Vanacore, Marco Canevelli
Software Mentions: 2
Published: over 3 years ago
10.1371/journal.pone.0119372
CRISPR MultiTargeter: A Web Tool to Find Common and Unique CRISPR Single Guide RNA Targets in a Set of Similar Sequences
Cited by: 119
Author(s): Sergey V. Prykhozhij, Vinothkumar Rajan, Daniel Gaston, Jason N. Berman
Software Mentions: 2
Published: over 9 years ago
10.3390/ijms21114022
Novel Comprehensive Bioinformatics Approaches to Determine the Molecular Genetic Susceptibility Profile of Moderate and Severe Asthma
Cited by: 10
Author(s): Hatem Zayed
Software Mentions: 2
Published: over 4 years ago
10.3390/molecules25214904
Computational Studies towards the Identification of Novel Rhodopsin-Binding Compounds as Chemical Chaperones for Misfolded Opsins
Cited by: 11
Author(s): Gaia Pasqualetto, Martin Schepelmann, Carmine Varricchio, Elisa Pileggi, Caroline Khogali, Siân R. Morgan, Ian Boostrom, Malgorzata Barbara Rozanowska, Andrea Brancale, Salvatore Ferla, Marcella Bassetto
Software Mentions: 2
Published: about 4 years ago
10.1186/s12936-018-2357-7
Appropriateness of malaria diagnosis and treatment for fever episodes according to patient history and anti-malarial blood measurement: a cross-sectional survey from Tanzania
Cited by: 8
Author(s): Joanna Gallay, Dominic Mosha, Erick Lutahakana, Festo Mazuguni, Martin Zuakulu, Laurent A. Décosterd, Blaise Genton, Emilie Pothin
Software Mentions: 2
Published: over 6 years ago
10.1186/1471-2156-9-92
A large-scale survey of genetic copy number variations among Han Chinese residing in Taiwan
Cited by: 23
Author(s): Chang‐Yu Lin, Ling-Hui Li, Sheng-Feng Ho, Tzu-Po Chuang, Jer‐Yuarn Wu, Yuan-Tsong Chen, Cathy S.J. Fann
Software Mentions: 2
Published: almost 16 years ago
10.3389/fnhum.2012.00246
Error Awareness and Salience Processing in the Oddball Task: Shared Neural Mechanisms
Cited by: 64
Author(s): Helga A. Harsay, M. Spaan, Jasper G. Wijnen, K. Richard Ridderinkhof
Software Mentions: 2
Published: almost 13 years ago
10.1186/s12859-018-2215-1
DiNAMO: highly sensitive DNA motif discovery in high-throughput sequencing data
Cited by: 2
Author(s): Chadi Saad, Laurent Noé, Hugues Richard, Julie Leclerc, Marie‐Pierre Buisine, Hélène Touzet, Martin Figeac
Software Mentions: 2
Published: over 6 years ago
10.1186/s13643-020-1285-0
Implementation of evidence-based practice for alcohol and substance use disorders: protocol for systematic review
Cited by: 12
Author(s): Eva Louie, Emma Barrett, Andrew Baillie, Paul Haber, Kirsten C. Morley
Software Mentions: 1
Published: almost 5 years ago
10.1186/s13643-020-01343-4
Traditional Chinese herbal medicine for treating novel coronavirus (COVID-19) pneumonia: protocol for a systematic review and meta-analysis
Cited by: 92
Author(s): Yuxi Li, Xiaobo Liu, Liuxue Guo, Juan Li, Dongling Zhong, Yonggang Zhang, Mike Clarke, Rongjiang Jin
Software Mentions: 1
Published: over 4 years ago
10.1186/s13643-021-01609-5
Effects of psychosocial interventions among people cared for in emergency departments after a suicide attempt: a systematic review protocol
Cited by: 2
Author(s): Ana Paula Coutinho da Silva, Margarida Henriques, Inês Rothes, Tiago Zortea, José Carlos Santos, Pim Cuijpers
Software Mentions: 1
Published: over 3 years ago
10.1186/1742-4682-6-12
Ranking candidate genes in rat models of type 2 diabetes
Cited by: 2
Author(s): Lars Andersson, Greta Petersen, Fredrik Ståhl
Software Mentions: 1
Published: over 15 years ago
10.1128/mBio.00276-16
Alveolar Type II Epithelial Cells Contribute to the Anti-Influenza A Virus Response in the Lung by Integrating Pathogen- and Microenvironment-Derived Signals
Cited by: 45
Author(s): Sabine Stegemann-Koniszewski, Andreas Jeron, Marcus Gereke, Robert Geffers, Andrea Kröger, Matthias Gunzer, Dunja Bruder
Software Mentions: 1
Published: over 8 years ago
10.5402/2012/512848
Cloning, Sequencing and In Silico Analysis of Omp C of Salmonella Typhimurium
Cited by: 4
Author(s): Richa Jha, Anil Kumar, Amita Saxena, Shantanu Tamuly, Mumtesh Kumar Saxena
Software Mentions: 1
Published: over 12 years ago
10.7150/ijms.54002
Pharmacological strategies to prevent haemodynamic changes after intubation in parturient women with hypertensive disorders of pregnancy: A network meta-analysis
Cited by: 2
Author(s): Sang Won Yoon, Geun Joo Choi, Hee-Kyeong Seong, Myeong Jong Lee, Hyun Kang
Software Mentions: 1
Published: almost 4 years ago
10.1186/s13045-021-01093-3
The global, regional, and national burden of cancer among adolescents and young adults in 204 countries and territories, 1990–2019: a population-based study
Cited by: 18
Author(s): Yi Feng Wen, Meng Xuan Chen, Guosheng Yin, Ruitao Lin, Yu Zhong, Qi Dong, Hai Ming Wong
Software Mentions: 1
Published: over 3 years ago
10.1093/intqhc/mzz077
Quality improvement in healthcare: the need for valid, reliable and efficient methods and indicators
Cited by: 1
Author(s): Mohaimenul Islam, Yu-Chuan Li
Software Mentions: 1
Published: over 5 years ago
10.3390/ijerph9103654
Implementation of BMP Strategies for Adaptation to Climate Change and Land Use Change in a Pasture-Dominated Watershed
Cited by: 32
Author(s): Li-Chi Chiang, Indrajeet Chaubey, Nien-Ming Hong, Yu‐Pin Lin, Tao Huang
Software Mentions: 1
Published: about 12 years ago
10.3390/ijerph18073589
Process Evaluation of the ‘No Money No Time’ Healthy Eating Website Promoted Using Social Marketing Principles. A Case Study
Cited by: 5
Author(s): Lee Ashton, Megan E. Rollo, Marc T. P. Adam, Tracy Burrows, Vanessa A. Shrewsbury, Clare E. Collins
Software Mentions: 1
Published: over 3 years ago
10.3390/ijerph18178960
Assessment of Future Water Yield and Water Purification Services in Data Scarce Region of Northwest China
Cited by: 5
Author(s): Yang Xu, Ruishan Chen, Guangxing Ji, Chao Wang, Yuanda Yang, Jiang Xu
Software Mentions: 1
Published: about 3 years ago
10.3390/ijms22010353
Effect of Cavity Disinfectants on Dentin Bond Strength and Clinical Success of Composite Restorations—A Systematic Review of In Vitro, In Situ and Clinical Studies
Cited by: 22
Author(s): Ana Coelho, Inês Amaro, Beatriz Rascão, Inês Isabel Gonçalves Marcelino, Anabela Paula, Joana Saraiva, Gianrico Spagnuolo, Manuel Marques Ferreira, Carlos Miguel Marto, Eunice Carrilho
Software Mentions: 1
Published: almost 4 years ago
10.3390/ijms22073479
Proof-of-Concept: Antisense Oligonucleotide Mediated Skipping of Fibrillin-1 Exon 52
Cited by: 3
Author(s): Jessica Cale, K. Greer, Sue Fletcher, Steve D. Wilton
Software Mentions: 1
Published: over 3 years ago
10.4061/2011/732560
Mikkeli Osteoporosis Index Identifies Fracture Risk Factors and Osteoporosis and Intervention Thresholds Parallel with FRAX
Cited by: 4
Author(s): Ville Waris, Joonas Sirola, Vesa Kiviniemi, Marjo Tuppurainen, V. Pekka Waris
Software Mentions: 1
Published: almost 14 years ago
10.3390/jpm11060476
Epithelial–Mesenchymal Transition Gene Signature Related to Prognostic in Colon Adenocarcinoma
Cited by: 8
Author(s): Constantin Busuioc, Cristina Alexandra Ciocan-Cârtiţă, Cornelia Braicu, Oana Zănoagă, Lajos Ráduly, Monica Trif, Mihai-Stefan Muresan, Călin Ionescu, Cristina Stefan, Carmen Crivii, Nadim Al Hajjar, Simona Mǎrgǎrit, Ioana Berindan‐Neagoe
Software Mentions: 1
Published: over 3 years ago
10.3390/jpm11010030
Digital Interventions for Psychological Comorbidities in Chronic Diseases—A Systematic Review
Cited by: 16
Author(s): Marta Maisto, Barbara Diana, Sonia Di Tella, Marta Matamala-Gomez, Jessica Isbely Montana, Federica Rossetto, Petar Aleksandrov Mavrodiev, Cesare Cavalera, Valeria Blasi, Fabrizia Mantovani, Francesca Baglio, Olivia Realdon
Software Mentions: 1
Published: almost 4 years ago
10.3390/nu13082821
The Impact of Lifestyle, Diet and Physical Activity on Epigenetic Changes in the Offspring—A Systematic Review
Cited by: 14
Author(s): L. M. Rasmussen, Sine Knorr, Christian S. Antoniussen, Jens Meldgaard Bruun, Per Ovesen, Jens Fuglsang, Ulla Kampmann
Software Mentions: 1
Published: over 3 years ago
10.3390/nu12030835
Low Energy Availability in Athletes 2020: An Updated Narrative Review of Prevalence, Risk, Within-Day Energy Balance, Knowledge, and Impact on Sports Performance
Cited by: 129
Author(s): Danielle M. Logue, Sharon M. Madigan, Anna Melin, Eamonn Delahunt, Mirjam M. Heinen, Sarah-Jane Mc Donnell, Clare Corish
Software Mentions: 1
Published: over 4 years ago
10.1007/s00701-020-04483-7
Deep learning for glioblastoma segmentation using preoperative magnetic resonance imaging identifies volumetric features associated with survival
Cited by: 8
Author(s): Yizhou Wan, Roushanak Rahmat, Stephen J. Price
Software Mentions: 1
Published: over 4 years ago
10.3390/nu11061420
A Novel Nutritional Index Serves as A Useful Prognostic Indicator in Cardiac Critical Patients Requiring Mechanical Circulatory Support
Cited by: 14
Author(s): Asuka Minami-Takano, Hiroshi Iwata, Katsutoshi Miyosawa, K Kubota, Atsushi Kimura, Shota Osawa, Minako Shitara, Shinya Okazaki, Satoru Suwa, Katsumi Miyauchi, Masataka Sumiyoshi, Atsushi Amano, Hiroyuki Daida
Software Mentions: 1
Published: over 5 years ago
10.1186/s41077-019-0099-4
Simulation versus real-world performance: a direct comparison of emergency medicine resident resuscitation entrustment scoring
Cited by: 30
Author(s): Kristen Weersink, Andrew K. Hall, Jessica Rich, Adam Szulewski, Jeffrey Damon Dagnone
Software Mentions: 1
Published: over 5 years ago
10.18632/aging.202192
Screening and functional prediction of differentially expressed circular RNAs in human glioma of different grades
Cited by: 15
Author(s): Xiuchao Geng, Yuhao Zhang, Qiang Li, Xi Wang, Wentao Yu, Liang Shi, Xiaomeng Lin, Shao-Guang Sun, Hong Wang
Software Mentions: 1
Published: almost 4 years ago
10.3390/antibiotics10081014
Daptomycin versus Vancomycin for the Treatment of Methicillin-Resistant Staphylococcus aureus Bloodstream Infection with or without Endocarditis: A Systematic Review and Meta-Analysis
Cited by: 24
Author(s): Alberto Enrico Maraolo, Agnese Giaccone, Ivan Gentile, Annalisa Saracino, Davide Fiore Bavaro
Software Mentions: 1
Published: over 3 years ago
10.1186/s12871-019-0772-0
Different dose regimes and administration methods of tranexamic acid in cardiac surgery: a meta-analysis of randomized trials
Cited by: 50
Author(s): Jingfei Guo, Xurong Gao, Yan Ma, Huran Lv, Wenjun Hu, Shijie Zhang, Hongwen Ji, Guyan Wang, Jia Shi
Software Mentions: 1
Published: over 5 years ago
10.1186/1471-2105-7-135
Gene functional similarity search tool (GFSST)
Cited by: 51
Author(s): Peisen Zhang, Jinghui Zhang, Huitao Sheng, James J. Russo, Brian I. Osborne, Kenneth H. Buetow
Software Mentions: 1
Published: over 18 years ago
10.1186/s12885-018-4922-4
The oncogene KRAS promotes cancer cell dissemination by stabilizing spheroid formation via the MEK pathway
Cited by: 15
Author(s): Juri Ogishima, Ayumi Taguchi, Akihiro Kawata, Kei Kawana, Midori Yoshida, Yuki Yoshimatsu, Masakazu Sato, Hitomi Nakamura, Yoshimasa Kawata, Akira Nishijima, Asaha Fujimoto, Kensuke Tomio, Katsuyuki Adachi, Takeshi Nagamatsu, Katsutoshi Oda, Tohru Kiyono, Yutaka Osuga, Tomoyuki Fujii
Software Mentions: 1
Published: almost 6 years ago
10.1186/s12872-019-01301-6
The use of data science to analyse physiology of oxygen delivery in the extracorporeal circulation
Cited by: 1
Author(s): Marceli Łukaszewski, Rafal Lukaszewski, Kinga Kosiorowska, Marek Jasiński
Software Mentions: 1
Published: almost 5 years ago
10.1186/s12875-018-0789-3
Reduction of inappropriate medication in older populations by electronic decision support (the PRIMA-eDS study): a qualitative study of practical implementation in primary care
Cited by: 25
Author(s): Anja Rieckert, Christina Sommerauer, Anja Krumeich, Andreas Sönnichsen
Software Mentions: 1
Published: over 6 years ago
10.1186/s12875-020-01288-6
Evidence based models of care for the treatment of alcohol use disorder in primary health care settings: a systematic review
Cited by: 5
Author(s): Susan A. Rombouts, James H. Conigrave, Richard Saitz, Eva Louie, Paul Haber, Kirsten C. Morley
Software Mentions: 1
Published: almost 4 years ago
10.1186/s12864-019-5646-9
Comparative genomic analysis of Bacillus paralicheniformis MDJK30 with its closely related species reveals an evolutionary relationship between B. paralicheniformis and B. licheniformis
Cited by: 28
Author(s): Yuhui Du, Jinjin Ma, Zhiqiu Yin, Kai Liu, Yao Gan, Wenfeng Xu, Lingchao Fan, Binghai Du, Yuqiang Ding, Chengqiang Wang
Software Mentions: 1
Published: over 5 years ago
10.1186/s12864-019-6306-9
Comparative genomics of Mycoplasma pneumoniae isolated from children with pneumonia: South Korea, 2010–2016
Cited by: 7
Author(s): Joon Kee Lee, Moon Woo Seong, Dong-Jin Shin, Jong‐Il Kim, Mi Seon Han, Youbin Yeon, Sung Im Cho, Sung Sup Park, Eun Hwa Choi
Software Mentions: 1
Published: almost 5 years ago
10.1186/1471-2164-15-S12-S4
Computational analysis of auxin responsive elements in the Arabidopsis thaliana L. genome
Cited by: 55
Author(s): В. В. Миронова, N. A. Omelyanchuk, Daniil S. Wiebe, Victor G. Levitsky
Software Mentions: 1
Published: almost 10 years ago
10.1186/1471-2164-8-269
ESTs and EST-linked polymorphisms for genetic mapping and phylogenetic reconstruction in the guppy, Poecilia reticulata
Cited by: 26
Author(s): Christine Dreyer, Maria Hoffmann, Christa Lanz, Eva-Maria Willing, Markus Riester, Norman Warthmann, Sprecher Andrea, Namita Tripathi, Stefan R. Henz, Detlef Weigel
Software Mentions: 1
Published: almost 18 years ago
10.1186/1471-2164-14-522
GTAG- and CGTC-tagged palindromic DNA repeats in prokaryotes
Cited by: 10
Author(s): Pier Paolo Di Nocera, Eliana De Gregorio, Francesco Rocco
Software Mentions: 1
Published: almost 12 years ago
10.1186/1471-2164-15-335
Accumulation of interspersed and sex-specific repeats in the non-recombining region of papaya sex chromosomes
Cited by: 27
Author(s): Jong Kuk Na, Jianping Wang, Ray Ming
Software Mentions: 1
Published: over 10 years ago
10.1186/s12864-016-2561-1
Genome analysis of the sugar beet pathogen Rhizoctonia solani AG2-2IIIB revealed high numbers in secreted proteins and cell wall degrading enzymes
Cited by: 67
Author(s): Daniel Wibberg, Lars Andersson, Georgios Tzelepis, Oliver Rupp, Jochen Blom, Lukas Jelonek, Alfred Pühler, Johan Fogelqvist, Mark Varrelmann, Andreas Schlüter, Christina Dixelius
Software Mentions: 1
Published: over 8 years ago
10.1186/1471-2164-14-464
KONAGAbase: a genomic and transcriptomic database for the diamondback moth, Plutella xylostella
Cited by: 51
Author(s): Akiya Jouraku, Kimiko Yamamoto, Seigo Kuwazaki, Masahiro Urio, Yoshitaka Suetsugu, Junko Narukawa, Kazuhisa Miyamoto, Kanako Kurita, Hajime Kanamori, Yūichi Katayose, Takashi Matsumoto, Hiroaki Noda
Software Mentions: 1
Published: almost 12 years ago
10.1186/1471-2164-16-S6-S4
Detection of miRNA regulatory effect on triple negative breast cancer transcriptome
Cited by: 10
Author(s): Loredana Martignetti, Bruno Tesson, Anna Almeida, Andrei Zinovyev, Gordon C. Tucker, Thierry Dubois, Emmanuel Barillot
Software Mentions: 1
Published: over 9 years ago
10.1186/1471-2164-15-976
What do all the (human) micro-RNAs do?
Cited by: 5
Author(s): Alfred Ultsch, Jörn Lötsch
Software Mentions: 1
Published: almost 11 years ago
10.1186/1471-2164-15-422
Genome-wide analysis of the distribution of AP2/ERF transcription factors reveals duplication and CBFs genes elucidate their potential function in Brassica oleracea
Cited by: 43
Author(s): Senthil Kumar Thamilarasan, Jong-In Park, Hee-Jeong Jung, Ill–Sup Nou
Software Mentions: 1
Published: over 10 years ago
10.1186/1471-2164-12-476
Deciphering c-MYC-regulated genes in two distinct tissues
Cited by: 16
Author(s): Samuel Robson, Lesley A. Ward, Helen Brown, Heather Turner, Ewan Hunter, Stella Pelengaris, Michael Khan
Software Mentions: 1
Published: about 13 years ago
10.1186/s12877-021-02092-2
Prevention of AcuTe admIssioN algorithm (PATINA): study protocol of a stepped wedge randomized controlled trial
Cited by: 2
Author(s): Anders Vestergaard Fournaise, Jørgen Lauridsen, Mickael Bech, Uffe Kock Wiil, Jesper B. Rasmussen, Kristian Kidholm, Kurt Espersen, Karen Andersen‐Ranberg
Software Mentions: 1
Published: over 3 years ago
10.1186/1472-6963-13-S2-S8
Approaches to ensuring and improving quality in the context of health system strengthening: a cross-site analysis of the five African Health Initiative Partnership programs
Cited by: 27
Author(s): Lisa R. Hirschhorn, Colin Baynes, Kenneth Sherr, Namwinga Chintu, John Koku Awoonor-Williams, Karen Finnegan, James F Philips, Anatole Manzi, Ayaga A. Bawah, Paulin Basinga
Software Mentions: 1
Published: over 11 years ago
10.1186/1471-2334-12-210
Detection of human herpesvirus 8 by quantitative polymerase chain reaction: development and standardisation of methods
Cited by: 22
Author(s): David Speicher, Newell W. Johnson
Software Mentions: 1
Published: about 12 years ago
10.1186/1741-7015-9-17
Effectively incorporating selected multimedia content into medical publications
Cited by: 36
Author(s): Alexander Ziegler, Daniel Mietchen, Cornelius Faber, Wolfram von Hausen, Christoph Schöbel, Markus Sellerer, Andreas Ziegler
Software Mentions: 1
Published: almost 14 years ago
10.1186/s12880-019-0400-y
Preliminary application of 3.0 T magnetic resonance chemical exchange saturation transfer imaging in brain metastasis of lung cancer
Cited by: 3
Author(s): Yanchao Yang, Zhangren Tu, Yihui Huang, Khan Afsar, Gen Yan, Gang Guo, Shaoyin Duan
Software Mentions: 1
Published: almost 5 years ago
10.1186/1471-2180-11-117
Adhesive polypeptides of Staphylococcus aureus identified using a novel secretion library technique in Escherichia coli
Cited by: 5
Author(s): Riikka Kylväjä, Matti Kankainen, Liisa Holm, Benita Westerlund-Wikström
Software Mentions: 1
Published: over 13 years ago
10.1186/s12882-017-0558-x
Frailty in end-stage renal disease: comparing patient, caregiver, and clinician perspectives
Cited by: 16
Author(s): David A. Clark, Usman Khan, Bryce A. Kiberd, Colin C. Turner, Alison Dixon, David Landry, Heather Moffatt, Paige Moorhouse, Karthik Tennankore
Software Mentions: 1
Published: over 7 years ago
10.1186/1472-684X-10-16
Piloting the role of a pharmacist in a community palliative care multidisciplinary team: an Australian experience
Cited by: 48
Author(s): Safeera Yasmeen Hussainy, Margaret Box, Sandy Scholes
Software Mentions: 1
Published: about 13 years ago
10.1186/s12870-020-02532-y
Diversity and evolution of cytochrome P450s of Jacobaea vulgaris and Jacobaea aquatica
Cited by: 3
Author(s): Yan-Gan Chen, Peter G. L. Klinkhamer, Johan Memelink, Klaas Vrieling
Software Mentions: 1
Published: over 4 years ago
10.1186/1471-2229-9-146
A recent duplication revisited: phylogenetic analysis reveals an ancestral duplication highly-conserved throughout the Oryza genus and beyond
Cited by: 31
Author(s): Julie Jacquemin, Michèle Laudié, Richard Cooke
Software Mentions: 1
Published: almost 15 years ago
10.1186/1471-2229-14-176
Ragweed (Ambrosia artemisiifolia) pollen allergenicity: SuperSAGE transcriptomic analysis upon elevated CO2 and drought stress
Cited by: 76
Author(s): Amr El Kelish, Feng Zhao, Werner Heller, Jörg Durner, J. Barbro Winkler, Heidrun Behrendt, Claudia Traidl‐Hoffmann, Ralf Horres, Matthias Pfeifer, Ulrike Frank, D. Ernst
Software Mentions: 1
Published: over 10 years ago
10.1186/1471-2229-8-40
Ornithine-δ-aminotransferase is essential for Arginine Catabolism but not for Proline Biosynthesis
Cited by: 168
Author(s): Dietmar Funck, Stadelhofer Bettina, Wolfgang Koch
Software Mentions: 1
Published: almost 17 years ago
10.1186/s12889-017-5005-1
Effectiveness of active school transport interventions: a systematic review and update
Cited by: 112
Author(s): Richard Larouche, George Mammen, David Rowe, Guy Faulkner
Software Mentions: 1
Published: almost 7 years ago
10.1186/s13104-019-4247-7
A human specific Alu DNA cassette is found flanking the genes of transcription factor AP2
Cited by: 3
Author(s): Hamdi Hamdi, Siddana Goud Reddy, Nada Laz, Renad Eltaher, Zahraa Kandell, Teif Mahmud, Lamia Alenazi, Basheer Haroun, Mohanad Hassan, Raju Ragavendra
Software Mentions: 1
Published: over 5 years ago
10.1136/bmjsem-2019-000528
How does surgery compare to sham surgery or physiotherapy as a treatment for tendinopathy? A systematic review of randomised trials
Cited by: 26
Author(s): Dimitrios Challoumas, Christopher Clifford, Paul Kirwan, Neal L. Millar
Software Mentions: 1
Published: over 5 years ago
10.3390/biom11081211
GNAi2/gip2-Regulated Transcriptome and Its Therapeutic Significance in Ovarian Cancer
Cited by: 8
Author(s): Ji Hee Ha, Muralidharan Jayaraman, Mingda Yan, Padmaja Dhanasekaran, Ciro Isidoro, Yong Sang Song, Danny N. Dhanasekaran
Software Mentions: 1
Published: over 3 years ago
10.1038/bjc.2015.135
Stearoyl-CoA desaturase 1 and paracrine diffusible signals have a major role in the promotion of breast cancer cell migration induced by cancer-associated fibroblasts
Cited by: 29
Author(s): Cristiana Angelucci, Giuseppe Maulucci, Anna Colabianchi, Fortunata Iacopino, Alessio D’Alessio, Alessandro Maiorana, Valentina Palmieri, Massimiliano Papi, Marco De Spirito, Alba Di Leone, Riccardo Masetti, Gigliola Sica
Software Mentions: 1
Published: over 9 years ago
10.1136/bjsports-2018-099552
Topical glyceryl trinitrate for the treatment of tendinopathies: a systematic review
Cited by: 32
Author(s): Dimitrios Challoumas, Paul Kirwan, Dmytro Borysov, Christopher Clifford, Michael McLean, Neal L. Millar
Software Mentions: 1
Published: about 6 years ago
10.1007/s10549-020-05670-x
Elevated MMP9 expression in breast cancer is a predictor of shorter patient survival
Cited by: 51
Author(s): Chitra Joseph, Mansour Alsaleem, Nnamdi Orah, Pavan Lakshmi Narasimha, Islam M. Miligy, Sasagu Kurozumi, Ian O. Ellis, Nigel P. Mongan, Andrew Green, Emad A. Rakha
Software Mentions: 1
Published: over 4 years ago
10.1186/s12935-020-01213-y
Elevated TNFRSF4 gene expression is a predictor of poor prognosis in non-M3 acute myeloid leukemia
Cited by: 8
Author(s): Shengqing Gu, Jian Zi, Qi Han, Chunhua Song, Zheng Ge
Software Mentions: 1
Published: over 4 years ago
10.1186/s12935-020-01379-5
Aberrant methylation and microRNA-target regulation are associated with downregulated NEURL1B: a diagnostic and prognostic target in colon cancer
Cited by: 8
Author(s): Jiaxin Liu, Zhao Liu, Xiaozhi Zhang, Yanli Yan, Shuai Shao, Demao Yao, Tuotuo Gong
Software Mentions: 1
Published: over 4 years ago
10.3390/ma12193247
NanoDefiner e-Tool: An Implemented Decision Support Framework for Nanomaterial Identification
Cited by: 7
Author(s): Raphael Brüngel, Johannes Rückert, Wendel Wohlleben, Frank Babick, Antoine Ghanem, Claire Gaillard, Agnieszka Mech, Hubert Rauscher, Vasile‐Dan Hodoroaba, Stefan Weigel, Christoph M. Friedrich
Software Mentions: 1
Published: about 5 years ago