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Projects: pypi: suite2p

https://packages.ecosyste.ms/registries/pypi.org/packages/suite2p

Pipeline for calcium imaging
88 versions
Latest release: almost 3 years ago
1,319 downloads last month

Enhanced Analysis
Educational Contributors: chriski777@berkeley.edu andrea_pierre@brown.edu amorsi@berkeley.edu oren.amsalem1@mail.huji.ac.il d.oneil@columbia.edu nmle@mit.edu hmacomber@uchicago.edu
Repository Activity:
Repository Owner: MouseLand (organization)
collaborative analysis of neural recordings Academic
README Analysis:
Science Score: 100/100
Starting Score: 100 points
Bonuses:
  • +140 Educational commit emails
    7 contributors with educational email addresses
  • +20 Academic repository owner
    Repository owned by academic institution
  • +15 Institutional repository owner
    Repository owned by research institution
  • +14 Science terms in README
    7 scientific terms found in README
  • +6 Academic links
    1 academic links found in README
Penalties:
  • -10 PyPI ecosystem
    General-purpose ecosystem
  • -15 No science keywords
    No scientific terms found in keywords/classifiers
  • -10 No science terms in description
    No scientific terms found in description
Very Likely Science (100)

Papers Mentioning suite2p 4

10.1038/s41598-021-90335-y
Whole brain functional recordings at cellular resolution in zebrafish larvae with 3D scanning multiphoton microscopy
Cited by: 15
Author(s): Matteo Bruzzone, Enrico Chiarello, Marco Albanesi, Maria Elena Miletto Petrazzini, Aram Megighian, Claudia Lodovichi, Marco Dal Maschio
Software Mentions: 6
Published: about 5 years ago
10.1523/ENEURO.0038-20.2020
DeepCINAC: A Deep-Learning-Based Python Toolbox for Inferring Calcium Imaging Neuronal Activity Based on Movie Visualization
Cited by: 11
Author(s): Julien Denis, Robin F Dard, Eleonora Quiroli, Rosa Cossart, Michel A. Picardo
Software Mentions: 3
Published: almost 6 years ago
10.3389/fncir.2020.607391
Calcium Imaging and the Curse of Negativity
Cited by: 19
Author(s): Gilles Vanwalleghem, Lena Constantin, Ethan K. Scott
Software Mentions: 1
Published: over 5 years ago
10.1038/s41598-020-64060-x
In vivo large-scale analysis of Drosophila neuronal calcium traces by automated tracking of single somata
Cited by: 16
Author(s): Felipe Delestro, Lisa Scheunemann, Mélanie Pedrazzani, P. Tchénio, Thomas Préat, Auguste Genovesio
Software Mentions: 1
Published: about 6 years ago