Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: pypi: strap
https://packages.ecosyste.ms/registries/pypi.org/packages/strap
Simple sTreamed Rdf Access Protocol
2 versions
Latest release: about 1 year ago
5 downloads last month
Papers Mentioning strap 26
10.1038/s42003-021-01887-8
The impact of locomotion on the brain evolution of squirrels and close relativesCited by: 23
Author(s): Ornella Bertrand, Hans P. Püschel, Julia A. Schwab, Mary Silcox, Stephen L. Brusatte
Software Mentions: 13
Published: over 3 years ago
10.1098/rstb.2018.0303
Origin and evolution of papillomavirus (onco)genes and genomesCited by: 35
Author(s): Anouk Willemsen, Ignacio G. Bravo
Software Mentions: 11
Published: over 5 years ago
10.7554/eLife.66036
A new Heterodontosaurus specimen elucidates the unique ventilatory macroevolution of ornithischian dinosaursCited by: 8
Author(s): Viktor J. Radermacher, Vincent Fernández, Emma R. Schachner, Richard J. Butler, Emese M. Bordy, Michael Naylor Hudgins, William J. De Klerk, Kimberley E. J. Chapelle, Jonah N. Choiniere
Software Mentions: 10
Published: over 3 years ago
10.1186/s12915-020-00908-y
First evidence of convergent lifestyle signal in reptile skull roof microanatomyCited by: 11
Author(s): Roy Ebel, Johannes Müller, Till Ramm, Christy A. Hipsley, Eli Amson
Software Mentions: 9
Published: almost 4 years ago
10.1186/s12983-017-0241-x
Trabecular architecture in the forelimb epiphyses of extant xenarthrans (Mammalia)Cited by: 37
Author(s): Eli Amson, Patrick Arnold, Anneke H. van Heteren, Aurore Canoville, John A. Nyakatura
Software Mentions: 9
Published: almost 7 years ago
10.1098/rsos.172177
The evolutionary history of polycotylid plesiosauriansCited by: 27
Author(s): Valentin Fischer, Roger Benson, Patrick S. Druckenmiller, Hilary F. Ketchum, Nathalie Bardet
Software Mentions: 9
Published: over 6 years ago
10.1098/rspb.2018.0270
Evolutionary adaptation to aquatic lifestyle in extinct sloths can lead to systemic alteration of bone structureCited by: 20
Author(s): Eli Amson, Guillaume Billet, Christian de Muizon
Software Mentions: 9
Published: over 6 years ago
10.1128/mBio.00925-19
A Robust Phylogenomic Time Tree for Biotechnologically and Medically Important Fungi in the Genera <i>Aspergillus</i> and <i>Penicillium</i>Cited by: 95
Author(s): Jacob L. Steenwyk, Xing‐Xing Shen, Abigail Lind, Gustavo H. Goldman, Antonis Rokas
Software Mentions: 8
Published: about 5 years ago
10.1186/s12915-019-0713-x
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiCited by: 31
Author(s): Yuanning Li, Michael G. Tassia, Damien S. Waits, Viktoria E. Bogantes, Kyle T. David, Kenneth M. Halanych
Software Mentions: 6
Published: almost 5 years ago
10.7717/peerj.3356
A molecular phylogeny of the spiny lobster <i>Panulirus homarus</i> highlights a separately evolving lineage from the Southwest Indian OceanCited by: 14
Author(s): Sohana P. Singh, Johan C. Groeneveld, Abdulaziz Al-Marzouqi, Sandi Willows‐Munro
Software Mentions: 6
Published: over 7 years ago
10.1186/s12870-018-1379-1
Investigation of mitochondrial-derived plastome sequences in the Paspalum lineage (Panicoideae; Poaceae)Cited by: 12
Author(s): Sean V. Burke, Mark C. Ungerer, Melvin R. Duvall
Software Mentions: 6
Published: over 6 years ago
10.1098/rsos.201591
A new large-bodied Pliocene seal with unusual cutting teethCited by: 5
Author(s): James P. Rule, Justin W. Adams, Douglass S. Rovinsky, David P. Hocking, Alistair R. Evans, Erich M. G. Fitzgerald
Software Mentions: 6
Published: about 4 years ago
10.1186/1471-2105-7-64
HotSwap for bioinformatics: A STRAP tutorialCited by: 8
Author(s): Christoph Gille, Peter N. Robinson
Software Mentions: 5
Published: over 18 years ago
10.1038/s42003-021-01799-7
Genomic insights into the host specific adaptation of the Pneumocystis genusCited by: 16
Author(s): Ousmane Cissé, Liang Ma, John P. Dekker, Pavel P. Khil, Jung Ho Youn, Jason M. Brenchley, Robert V Blair, Bapi Pahar, Magali Chabé, Koen K. A. Van Rompay, Rebekah I. Keesler, Antti Sukura, Vanessa M. Hirsch, Geetha Kutty, Yueqin Liu, Peng Li, Jie Chen, Jun Song, Christiane Weissenbacher‐Lang, Jie Xu, Nathan S. Upham, Jason E. Stajich, Christina A. Cuomo, Melanie T. Cushion, Joseph A. Kovacs
Software Mentions: 5
Published: over 3 years ago
10.1098/rspb.2015.2840
Environmental drivers of crocodyliform extinction across the Jurassic/Cretaceous transitionCited by: 40
Author(s): Jonathan Tennant, Philip D. Mannion, Paul Upchurch
Software Mentions: 5
Published: over 8 years ago
10.1002/ece3.3042
Rates and relations of mitochondrial genome evolution across the Echinoidea, with special focus on the superfamily OdontophoraCited by: 9
Author(s): Áki J. Láruson
Software Mentions: 4
Published: over 7 years ago
10.3390/plants8070210
Phylogenetic Reconstruction and Divergence Time Estimation of Blumea DC. (Asteraceae: Inuleae) in China Based on nrDNA ITS and cpDNA trnL-F SequencesCited by: 6
Author(s): Yingbo Zhang, Yuan Yuan, Yuxin Pang, Fu-Lai Yu, Chao Yuan, Dan Wang, Xuan Hu
Software Mentions: 3
Published: over 5 years ago
10.7717/peerj.4594
<i>Rhinochelys amaberti</i>Moret (1935), a protostegid turtle from the Early Cretaceous of FranceCited by: 9
Author(s): Isaure Scavezzoni, Valentin Fischer
Software Mentions: 3
Published: over 6 years ago
10.1002/ece3.6361
Modularity and heterochrony in the evolution of the ceratopsian dinosaur frillCited by: 9
Author(s): Albert Prieto‐Márquez, Joan García-Porta, Shantanu H. Joshi, Mark A. Norell, Peter J. Makovicky
Software Mentions: 3
Published: over 4 years ago
10.1016/j.ijppaw.2019.09.005
Ecological and geographical speciation in Lucilia bufonivora: The evolution of amphibian obligate parasitismCited by: 5
Author(s): G. Arias‐Robledo, Richard Wall, Krzysztof Szpila, Danny Shpeley, Terry L. Whitworth, Tariq Stark, R. Andrew King, Jamie R. Stevens
Software Mentions: 3
Published: almost 5 years ago
10.7717/peerj.12094
Phylogenetic analysis of a new morphological dataset elucidates the evolutionary history of Crocodylia and resolves the long-standing gharial problemCited by: 28
Author(s): Jonathan P. Rio, Philip D. Mannion
Software Mentions: 2
Published: about 3 years ago
10.7717/peerj.5901
A new phylogenetic analysis of Phytosauria (Archosauria: Pseudosuchia) with the application of continuous and geometric morphometric character codingCited by: 29
Author(s): Andrew Jones, Richard J. Butler
Software Mentions: 2
Published: almost 6 years ago
10.7717/peerj.7457
The pre-Pleistocene fossil thylacinids (Dasyuromorphia: Thylacinidae) and the evolutionary context of the modern thylacineCited by: 13
Author(s): Douglass S. Rovinsky, Alistair R. Evans, Justin W. Adams
Software Mentions: 2
Published: about 5 years ago
10.3389/fvets.2019.00511
Retrospect and Risk Analysis of Foot-and-Mouth Disease in China Based on Integrated Surveillance and Spatial Analysis ToolsCited by: 9
Author(s): Jiahui Chen, Jianying Wang, Minjia Wang, Ruirui Liang, Yi Lu, Qiang Zhang, Qin Chen, Bing Niu
Software Mentions: 2
Published: almost 5 years ago
10.1038/s41598-017-01195-4
Diversity and evolution of sex determination systems in terrestrial isopodsCited by: 29
Author(s): Thomas Becking, Isabelle Giraud, Maryline Raimond, Bouziane Moumen, Christopher H. Chandler, Richard Cordaux, Clément Gilbert
Software Mentions: 2
Published: over 7 years ago
10.1038/s41598-019-48297-9
A New Clevosaurid from the Triassic (Carnian) of Brazil and the Rise of Sphenodontians in GondwanaCited by: 26
Author(s): Annie Schmaltz Hsiou, Randall L. Nydam, Tiago R. Simões, Flávio Augusto Pretto, Silvio Onary, Agustín G. Martinelli, Alexandre Liparini, Paulo Rodrigo Romo de Vivar Martínez, Marina Bento Soares, César Leandro Schultz, Michael W. Caldwell
Software Mentions: 2
Published: about 5 years ago