Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: pypi: stats

https://packages.ecosyste.ms/registries/pypi.org/packages/stats

Calculator-style statistical functions
3 versions
Latest release: almost 14 years ago
2 dependent packages
15,224 downloads last month

Papers Mentioning stats 3,105

10.3389/fnins.2017.00363
The Role of the Interplay between Stimulus Type and Timing in Explaining BCI-Illiteracy for Visual P300-Based Brain-Computer Interfaces
Cited by: 12
Author(s): Roberta Carabalona
Software Mentions: 6
Published: over 7 years ago
10.1098/rspb.2021.0582
Disease or drought: environmental fluctuations release zebra from a potential pathogen-triggered ecological trap
Cited by: 7
Author(s): Yen‐Hua Huang, Hendrina Joel, Martina Küsters, Zoë R. Barandongo, Claudine C. Cloete, Axel Hartmann, Pauline L. Kamath, J. Kilian, John K. E. Mfune, Gabriel Shatumbu, Royi Zidon, Wayne M. Getz, Wendy C. Turner
Software Mentions: 6
Published: over 3 years ago
10.1073/pnas.1914491116
BMP signaling inhibition in <i>Drosophila</i> secondary cells remodels the seminal proteome and self and rival ejaculate functions
Cited by: 28
Author(s): Ben R. Hopkins, Irem Sepil, Sarah Bonham, Thomas D. Miller, P. David Charles, Román Fischer, Benedikt M. Kessler, Clive Wilson, Stuart Wigby
Software Mentions: 6
Published: about 5 years ago
10.1002/ece3.6182
Isotopic niche differs between seal and fish‐eating killer whales ( <i>Orcinus orca</i> ) in northern Norway
Cited by: 24
Author(s): Eve Jourdain, Clare Andvik, Richard Karoliussen, Anders Ruus, Dag Vongraven, Katrine Borgå
Software Mentions: 6
Published: over 4 years ago
10.1098/rsos.200327
Buried treasure—marine turtles do not ‘disguise’ or ‘camouflage’ their nests but avoid them and create a decoy trail
Cited by: 1
Author(s): Thomas J. Burns, Rory R. Thomson, Rosemary A. McLaren, Jack Rawlinson, Euan M. McMillan, Hannah Davidson, Malcolm W. Kennedy
Software Mentions: 6
Published: over 4 years ago
10.1002/ece3.5819
Evolution of sexually dimorphic pheromone profiles coincides with increased number of male‐specific chemosensory organs in <i>Drosophila prolongata</i>
Cited by: 12
Author(s): Yige Luo, Yunwei Zhang, Jean‐Pierre Farine, Jean‐François Ferveur, Santiago R. Ramírez, Artyom Kopp
Software Mentions: 6
Published: about 5 years ago
10.1002/evl3.13
Experimental evolution reveals that sperm competition intensity selects for longer, more costly sperm
Cited by: 44
Author(s): Joanne L. Godwin, Ramakrishnan Vasudeva, Łukasz Michalczyk, Oliver Y. Martin, Alyson J. Lumley, Tracey Chapman, Matthew J. G. Gage
Software Mentions: 6
Published: over 7 years ago
10.1002/evl3.80
Lineages evolved under stronger sexual selection show superior ability to invade conspecific competitor populations
Cited by: 10
Author(s): Joanne L. Godwin, Lewis G. Spurgin, Łukasz Michalczyk, Oliver Y. Martin, Alyson J. Lumley, Tracey Chapman, Matthew J. G. Gage
Software Mentions: 6
Published: about 6 years ago
10.1371/journal.pone.0142236
Urban Power Line Corridors as Novel Habitats for Grassland and Alien Plant Species in South-Western Finland
Cited by: 22
Author(s): Jussi Lampinen, Kalle Ruokolainen, Ari‐Pekka Huhta
Software Mentions: 6
Published: about 9 years ago
10.1111/eva.12643
Fitness costs of key point mutations that underlie acaricide target‐site resistance in the two‐spotted spider mite <i>Tetranychus urticae</i>
Cited by: 38
Author(s): Sabina Bajda, Maria Riga, Nicky Wybouw, Stavrini Papadaki, Eleni Ouranou, Seyedeh Masoumeh Fotoukkiaii, John Vontas, Thomas Van Leeuwen
Software Mentions: 6
Published: over 6 years ago
10.3389/fpls.2021.715309
An Affordable Image-Analysis Platform to Accelerate Stomatal Phenotyping During Microscopic Observation
Cited by: 2
Author(s): Yosuke Toda, Toshiaki Tameshige, Masakazu Tomiyama, Toshinori Kinoshita, Kentaro Shimizu
Software Mentions: 6
Published: over 3 years ago
10.1038/sdata.2017.35
A geographically-diverse collection of 418 human gut microbiome pathway genome databases
Cited by: 6
Author(s): Aria S. Hahn, Tomer Altman, Kishori M. Konwar, Niels W. Hanson, Dongjae Kim, David A. Relman, David L. Dill, Steven J. Hallam
Software Mentions: 6
Published: over 7 years ago
10.1002/ece3.2206
Are the metabolomic responses to folivory of closely related plant species linked to macroevolutionary and plant-folivore coevolutionary processes?
Cited by: 14
Author(s): Albert Rivas‐Ubach, José A. Hódar, Jordi Sardans, Jennifer Kyle, Young Mo Kim, Michal Oravec, Otmar Urban, Alex Guenther, Josep Peñuelas
Software Mentions: 6
Published: over 8 years ago
10.3389/fnut.2019.00045
What's Normal? Microbiomes in Human Milk and Infant Feces Are Related to Each Other but Vary Geographically: The INSPIRE Study
Cited by: 135
Author(s): Kimberly A. Lackey, Janet E. Williams, Courtney L. Meehan, Jessica A. Zachek, Elizabeth D. Benda, William J. Price, James A. Foster, Daniel Sellen, Elizabeth Kamau-Mbuthia, Egidioh W. Kamundia, Samwel Mbugua, Sophie E. Moore, Andrew M. Prentice, Debela Gindola K, Linda J. Kvist, Gloria E. Otoo, Cristina García-Carral, Esther Jiménez, Lorena Ruíz, Juan M. Rodríguez, Rossina G. Pareja, Lars Bode, Mark A. McGuire, Michelle K. McGuire
Software Mentions: 6
Published: over 5 years ago
10.1038/s41598-021-94247-9
Automated scoring for a Tablet-based Rey Figure copy task differentiates constructional, organisational, and motor abilities
Cited by: 4
Author(s): Marco Alessandro Petilli, Roberta Daini, Francesca Lea Saibene, Marco Rabuffetti
Software Mentions: 6
Published: over 3 years ago
10.1098/rspb.2018.0956
Parasite-infected sticklebacks increase the risk-taking behaviour of uninfected group members
Cited by: 16
Author(s): Nicolle Demandt, Benedikt Saus, Ralf H. J. M. Kurvers, Jens Krause, Joachim Kurtz, Jörn P. Scharsack
Software Mentions: 6
Published: over 6 years ago
10.3390/toxins11110624
Analysis of the Use of Cylindrospermopsin and/or Microcystin-Contaminated Water in the Growth, Mineral Content, and Contamination of Spinacia oleracea and Lactuca sativa
Cited by: 22
Author(s): María Llana-Ruiz-Cabello, Ángeles Jos, Ana M. Cameán, Flávio Luís de Oliveira, Aldo Barreiro Felpeto, J.A.T. Machado, Joana Azevedo, Edgar Pinto, Agostinho Almeida, Alexandre Campos, Vítor Vasconcelos, Marisa Freitas
Software Mentions: 6
Published: about 5 years ago
10.3389/fnins.2019.00392
Data-Driven Analysis of Age, Sex, and Tissue Effects on Gene Expression Variability in Alzheimer's Disease
Cited by: 19
Author(s): Lavida R. K. Brooks, George I. Mias
Software Mentions: 6
Published: over 5 years ago
10.3389/fpls.2020.00803
Slug Feeding Triggers Dynamic Metabolomic and Transcriptomic Responses Leading to Induced Resistance in Solanum dulcamara
Cited by: 3
Author(s): Onno W Calf, Tobias Lortzing, Alexander Weinhold, Yvonne Poeschl, Janny L. Peters, Heidrun Huber, Anke Steppuhn, Nicole M. van Dam
Software Mentions: 6
Published: over 4 years ago
10.1371/journal.pone.0183906
Flat and complex temperate reefs provide similar support for fish: Evidence for a unimodal species-habitat relationship
Cited by: 39
Author(s): Avery B. Paxton, Emily A. Pickering, Alyssa M. Adler, James C. Taylor, Charles H. Peterson
Software Mentions: 5
Published: about 7 years ago
10.3389/fneur.2020.546744
LesionQuant for Assessment of MRI in Multiple Sclerosis—A Promising Supplement to the Visual Scan Inspection
Cited by: 7
Author(s): Synne Brune, Einar August Høgestøl, Vanja Cengija, Pål Berg‐Hansen, Piotr Sowa, Gro Owren Nygaard, Hanne F. Harbo, Mona K. Beyer
Software Mentions: 5
Published: almost 4 years ago
10.3389/fpls.2019.00214
Root-Associated Fungal Communities From Two Phenologically Contrasting Silver Fir (Abies alba Mill.) Groups of Trees
Cited by: 18
Author(s): Tina Unuk, Tijana Martinović, Domen Finžgar, Nataša Šibanc, Tine Grebenc, Hojka Kraigher
Software Mentions: 5
Published: over 5 years ago
10.1128/mBio.00521-21
Patterns of Gene Content and Co-occurrence Constrain the Evolutionary Path toward Animal Association in Candidate Phyla Radiation Bacteria
Cited by: 26
Author(s): Alexander L. Jaffe, Alex D. Thomas, Christine He, Ray Keren, Luis E. Valentin-Alvarado, Patrick Munk, Keith Bouma‐Gregson, Ibrahim Farag, Yuki Amano, Rohan Sachdeva, Patrick T. West
Software Mentions: 5
Published: about 3 years ago
10.3389/fnins.2020.620723
Spatiotemporal Processing of Bimodal Odor Lateralization in the Brain Using Electroencephalography Microstates and Source Localization
Cited by: 2
Author(s): Christine Ida Hucke, Rebekka Heinen, Marlene Pacharra, Edmund Wascher, Christoph van Thriel
Software Mentions: 5
Published: almost 4 years ago
10.1038/s41396-021-00923-z
Maize germplasm chronosequence shows crop breeding history impacts recruitment of the rhizosphere microbiome
Cited by: 38
Author(s): Alonso Favela, Martin Bohn, Angela D. Kent
Software Mentions: 5
Published: over 3 years ago
10.3389/fpls.2020.604938
Multiple Small-Effect Alleles of Indica Origin Enhance High Iron-Associated Stress Tolerance in Rice Under Field Conditions in West Africa
Cited by: 8
Author(s): Giovanni Melandri, Mouritala Sikirou, Juan David Arbelaez, Afeez Shittu, Vimal Kumar Semwal, Kadougoudiou Abdourasmane Konate, A. T. Maji, Steven A. Ngaujah, Inoussa Akintayo, Vishnu Govindaraj, Yuxin Shi, Francisco Agosto-Perez, Anthony J. Greenberg, G. N. Atlin, R. Venuprasad, Susan R. McCouch
Software Mentions: 5
Published: almost 4 years ago
10.3389/fpls.2018.01698
Geography and Environment Shape Landscape Genetics of Mediterranean Alpine Species Silene ciliata Poiret. (Caryophyllaceae)
Cited by: 15
Author(s): Javier Morente‐López, Cristina García, Carlos Lara‐Romero, Alfredo García‐Fernández, David Draper, J. M. Iriondo
Software Mentions: 5
Published: about 6 years ago
10.1371/journal.pone.0256568
The absence of fans removes the home advantage associated with penalties called by National Hockey League referees
Cited by: 6
Author(s): Joël Guérette, Caroline Blais, Daniel Fiset
Software Mentions: 5
Published: over 3 years ago
10.3389/fpls.2018.00987
Genome Scans Reveal Homogenization and Local Adaptations in Populations of the Soybean Cyst Nematode
Cited by: 6
Author(s): Anne-Frédérique Gendron St-Marseille, Étienne Lord, Pierre-Yves Véronneau, Jacques Brodeur, Benjamin Mimee
Software Mentions: 5
Published: over 6 years ago
10.1128/mBio.00180-20
Systemic Inflammatory Mediators Are Effective Biomarkers for Predicting Adverse Outcomes in Clostridioides difficile Infection
Cited by: 16
Author(s): Michael G. Dieterle, Rosemary Putler, D. Alexander Perry, Anitha Menon, Lisa Abernathy-Close, Naomi Perlman, Aline Penkevich, Alex Standke, Micah Keidan, Kimberly C. Vendrov, Ingrid L. Bergin, Vincent B. Young, Krishna Rao
Software Mentions: 5
Published: over 4 years ago
10.1371/journal.pone.0204963
Eye behavior does not adapt to expected visual distraction during internally directed cognition
Cited by: 15
Author(s): Sonja Annerer‐Walcher, Christof Körner, Mathias Benedek
Software Mentions: 5
Published: about 6 years ago
10.1128/mBio.03186-19
Fecal Metabolomic Signatures in Colorectal Adenoma Patients Are Associated with Gut Microbiota and Early Events of Colorectal Cancer Pathogenesis
Cited by: 86
Author(s): Minsuk Kim, Emily Vogtmann, David A. Ahlquist, Mary E. Devens, John B. Kisiel, William R. Taylor, Bryan A. White, Vanessa L. Hale, Jaeyun Sung, Nicholas Chia, Rashmi Sinha, Jun Chen
Software Mentions: 5
Published: almost 5 years ago
10.1128/mBio.03042-19
Quantitative Framework for Model Evaluation in Microbiology Research Using <i>Pseudomonas aeruginosa</i> and Cystic Fibrosis Infection as a Test Case
Cited by: 83
Author(s): Daniel M. Cornforth, Frances L. Diggle, Jeffrey A. Melvin, Jennifer M. Bomberger, Marvin Whiteley
Software Mentions: 5
Published: almost 5 years ago
10.1128/mBio.00311-19
Gut Microbiota and Phytoestrogen-Associated Infertility in Southern White Rhinoceros
Cited by: 32
Author(s): Candace L. Williams, Alexis R. Ybarra, Ashley N. Meredith, Barbara S. Durrant, Christopher W. Tubbs
Software Mentions: 5
Published: over 5 years ago
10.1038/s41398-021-01410-x
Obsessive–compulsive symptoms and information seeking during the Covid-19 pandemic
Cited by: 22
Author(s): Alisa M. Loosen, Vasilisa Skvortsova, Tobias U. Hauser
Software Mentions: 5
Published: over 3 years ago
10.1371/journal.pone.0195273
AFLP-based genetic diversity of wild orchardgrass germplasm collections from Central Asia and Western China, and the relation to environmental factors
Cited by: 12
Author(s): Chenglin Zhang, Ming Sun, Xinquan Zhang, Shiyong Chen, Gang Nie, Yan Peng, Linkai Huang, Xiao Ma
Software Mentions: 5
Published: over 6 years ago
10.7150/thno.57775
Machine learning-assisted immune profiling stratifies peri-implantitis patients with unique microbial colonization and clinical outcomes
Cited by: 20
Author(s): Chin-Wei Wang, Yuning Hao, Riccardo Di Gianfilippo, James V. Sugai, Jiaqian Li, Wang Gong, Kenneth S. Kornman, Hom‐Lay Wang, Nobuhiko Kamada, Yuying Xie, William V. Giannobile, Yu Lei
Software Mentions: 5
Published: almost 4 years ago
10.1007/s00066-019-01522-w
Tumor regression during radiotherapy for non-small cell lung cancer patients using cone-beam computed tomography images
Cited by: 5
Author(s): Janita E. van Timmeren, Wouter van Elmpt, Dirk De Ruysscher, Bart Reymen, Olfred Hansen, Carsten Brink
Software Mentions: 5
Published: about 5 years ago
10.1186/s13395-017-0144-8
Comparison of multiple transcriptomes exposes unified and divergent features of quiescent and activated skeletal muscle stem cells
Cited by: 29
Author(s): Natalia Pietrosemoli, Sébastien Mella, Siham Yennek, Meryem B. Baghdadi, Hiroshi Sakai, Ramkumar Sambasivan, Francesca Pala, Daniela Di Girolamo, Shahragim Tajbakhsh
Software Mentions: 5
Published: almost 7 years ago
10.1371/journal.pone.0215351
The bacterial communities of the small intestine and stool in children with short bowel syndrome
Cited by: 14
Author(s): Steven L. Zeichner, Emmanuel F. Mongodin, Lauren E. Hittle, Szu-Han Huang, Clarivet Torres
Software Mentions: 5
Published: over 5 years ago
10.1371/journal.pone.0152852
Allelic Variation in Developmental Genes and Effects on Winter Wheat Heading Date in the U.S. Great Plains
Cited by: 58
Author(s): Sarah M. Grogan, Gina Brown‐Guedira, Scott D. Haley, Gregory S. McMaster, Scott D. Reid, J. Spencer Smith, Patrick F. Byrne
Software Mentions: 5
Published: over 8 years ago
10.1371/journal.pone.0193417
Sex- and brain region-specific patterns of gene expression associated with socially-mediated puberty in a eusocial mammal
Cited by: 20
Author(s): Mariela Faykoo-Martinez, D. Ashley Monks, Iva B. Zovkic, Melissa M. Holmes
Software Mentions: 5
Published: almost 7 years ago
10.3390/s19030626
Understanding Eye Movement Signal Characteristics Based on Their Dynamical and Fractal Features
Cited by: 6
Author(s): Katarzyna Harężlak, Paweł Kasprowski
Software Mentions: 5
Published: almost 6 years ago
10.1038/s41598-021-98782-3
Evaluation of JATSdecoder as an automated text extraction tool for statistical results in scientific reports
Cited by: 5
Author(s): Ingmar Böschen
Software Mentions: 5
Published: about 3 years ago
10.1038/s41598-021-98300-5
Quantifying and predicting antimicrobials and antimicrobial resistance genes in waterbodies through a holistic approach: a study in Minnesota, United States
Cited by: 4
Author(s): Irene Bueno, Amanda Beaudoin, William A. Arnold, Taegyu Kim, Lara Frankson, Timothy M. LaPara, Kaushi S. T. Kanankege, Kristine H. Wammer, Randall S. Singer
Software Mentions: 5
Published: about 3 years ago
10.1038/s41598-021-98176-5
Flow cytometry method for absolute counting and single-cell phenotyping of mycobacteria
Cited by: 5
Author(s): David Barr, Charles Onyango Omollo, Mandy K. Mason, Anastasia Koch, Robert J. Wilkinson, David G. Lalloo, Graeme Meintjes, Valerie Mizrahi, Digby F. Warner, Gerry Davies
Software Mentions: 5
Published: about 3 years ago
10.1371/journal.pone.0166969
Hybrid Origins of Citrus Varieties Inferred from DNA Marker Analysis of Nuclear and Organelle Genomes
Cited by: 72
Author(s): Tokurou Shimizu, Akira Kitajima, Kenichi Nonaka, Terutaka Yoshioka, Satoshi Ohta, Shingo Goto, Atsushi Toyoda, Asao Fujiyama, Takako Mochizuki, Hideki Nagasaki, Eli Kaminuma, Yasukazu Nakamura
Software Mentions: 5
Published: almost 8 years ago
10.1038/s41598-021-96378-5
Biogeography of acoustic biodiversity of NW Mediterranean coralligenous reefs
Cited by: 13
Author(s): Lucia Di Iorio, Manon Audax, Julie Déter, Florian Holon, Julie Lossent, Cédric Gervaise, Pierre Boissery
Software Mentions: 5
Published: over 3 years ago
10.1002/ece3.7946
Restored and remnant Banksia woodlands elicit different foraging behavior in avian pollinators
Cited by: 2
Author(s): Alison Ritchie, Catherine Elliott, Elizabeth A. Sinclair, Siegfried L. Krauss
Software Mentions: 5
Published: over 3 years ago
10.1038/srep40170
Simultaneous abrupt shifts in hydrology and fish assemblage structure in a floodplain lake in the central Amazon
Cited by: 66
Author(s): Cristhiana Paula Röpke, Sidinéia Amadio, Jansen Zuanon, Efrem Jorge Gondim Ferreira, Cláudia Pereira de Deus, Tiago Pires, Kirk O. Winemiller
Software Mentions: 5
Published: almost 8 years ago
10.1002/ece3.4160
Time‐lapse cameras reveal latitude and season influence breeding phenology durations in penguins
Cited by: 7
Author(s): Caitlin Black, Ben Collen, Daniel Lunn, Dick Filby, Stephanie Winnard, Tom Hart
Software Mentions: 5
Published: over 6 years ago
10.1002/ece3.3233
Population structure of a widespread bat (<i>Tadarida brasiliensis</i>) in an island system
Cited by: 22
Author(s): Kelly A. Speer, Brandi Jo Petronio, Nancy B. Simmons, Rebecca Richey, Kristin Magrini, J. Angel Soto‐Centeno, David L. Reed
Software Mentions: 5
Published: over 7 years ago
10.1002/ece3.4355
Genetically determined fungal pathogen tolerance and soil variation influence ectomycorrhizal traits of loblolly pine
Cited by: 8
Author(s): Bridget J. Piculell, Lori G. Eckhardt, Jason D. Hoeksema
Software Mentions: 5
Published: about 6 years ago
10.1038/srep33912
Flipper strokes can predict energy expenditure and locomotion costs in free-ranging northern and Antarctic fur seals
Cited by: 25
Author(s): Tiphaine Jeanniard‐du‐Dot, Andrew W. Trites, John P. Y. Arnould, John R. Speakman, Christophe Guinet
Software Mentions: 5
Published: about 8 years ago
10.1038/srep33828
Genetic and environmental influences on the germination of basidiospores in the Cryptococcus neoformans species complex
Cited by: 14
Author(s): Adrian Forsythe, Aaron A. Vogan, Jianping Xu
Software Mentions: 5
Published: about 8 years ago
10.1111/1462-2920.14498
Gut microbiota in patients after surgical treatment for colorectal cancer
Cited by: 21
Author(s): Ye Jin, Yang Liu, Lei Zhao, Fuya Zhao, Jing Feng, Shengda Li, Huinan Chen, Jiayu Sun, Bihai Zhu, Rui Geng, Yunwei Wei
Software Mentions: 5
Published: almost 6 years ago
10.1111/j.1462-2920.2011.02494.x
Drivers of bacterial diversity dynamics in permeable carbonate and silicate coral reef sands from the Red Sea
Cited by: 46
Author(s): Sandra Schöttner, Barbara Pfitzner, Stefanie Grünke, Mohammed Rasheed, Christian Wild, Alban Ramette
Software Mentions: 5
Published: over 13 years ago
10.1038/s41597-019-0341-x
The Database of Cross-Linguistic Colexifications, reproducible analysis of cross-linguistic polysemies
Cited by: 50
Author(s): Christoph Rzymski, Tiago Tresoldi, Simon J. Greenhill, Mei-Shin Wu, Nathanael E. Schweikhard, Maria Koptjevskaja‐Tamm, Volker Gast, Timotheus Adrianus Bodt, Abbie Hantgan, Gereon A. Kaiping, S. Chang, Yunfan Lai, Natalia Morozova, Heini Arjava, Nataliia Hübler, Ezequiel Koile, Steve Pepper, Mariann Proos, Briana Van Epps, Ingrid Blanco, Carolin Hundt, Sergei Monakhov, Kristina Pianykh, Sallona Ramesh, Russell D. Gray, Robert Forkel, Johann‐Mattis List
Software Mentions: 5
Published: almost 5 years ago
10.1186/s13072-015-0046-0
Functionally distinct patterns of nucleosome remodeling at enhancers in glucocorticoid-treated acute lymphoblastic leukemia
Cited by: 16
Author(s): Jiansheng Wu, Luca Pinello, Elinor Yissachar, Jonathan W. Wischhusen, Guo‐Cheng Yuan, Charles W.M. Roberts
Software Mentions: 5
Published: almost 9 years ago
10.1038/sdata.2018.136
A merged lung cancer transcriptome dataset for clinical predictive modeling
Cited by: 26
Author(s): Su Bin Lim, Swee Jin Tan, Wan-Teck Lim, Chwee Teck Lim
Software Mentions: 5
Published: over 6 years ago
10.1016/j.schres.2020.04.017
Modeling perception and behavior in individuals at clinical high risk for psychosis: Support for the predictive processing framework
Cited by: 17
Author(s): Eren Kafadar, Vijay A. Mittal, Gregory P. Strauss, Hannah C. Chapman, Lauren M. Ellman, Sonia Bansal, James M. Gold, Ben Alderson-Day, Samuel Evans, Jamie Moffatt, Steven M. Silverstein, Elaine F. Walker, Scott W. Woods, Philip R. Corlett, Albert R. Powers
Software Mentions: 5
Published: almost 4 years ago
10.1098/rsos.170082
Density-dependent coral recruitment displays divergent responses during distinct early life-history stages
Cited by: 54
Author(s): Christopher Doropoulos, Nicolas R. Evensen, Luis A. Gómez-Lemos, Russell C. Babcock
Software Mentions: 5
Published: over 7 years ago
10.1016/j.prevetmed.2021.105395
Multiple model triangulation to identify factors associated with lameness in British sheep flocks
Cited by: 5
Author(s): Kate Lewis, Michael J. Green, Jessica D. Witt, Laura Green
Software Mentions: 5
Published: over 3 years ago
10.1371/journal.ppat.1009701
Control of SARS-CoV-2 infection after Spike DNA or Spike DNA+Protein co-immunization in rhesus macaques
Cited by: 11
Author(s): Margherita Rosati, Mahesh Agarwal, Xintao Hu, Santhi Devasundaram, Dimitris Stellas, Bhabadeb Chowdhury, Jenifer Bear, Robert T. Burns, Duncan Donohue, Laurent Pessaint, Hanné Andersen, Mark G. Lewis, Evangelos Terpos, Meletios A. Dimopoulos, Alexander Wlodawer, James I. Mullins, David Venzon, George N. Pavlakis, Barbara K. Felber
Software Mentions: 5
Published: about 3 years ago
10.1371/journal.ppat.1008717
Genomic and transcriptomic evidence for descent from Plasmodium and loss of blood schizogony in Hepatocystis parasites from naturally infected red colobus monkeys
Cited by: 17
Author(s): Eerik Aunin, Ulrike Böhme, Theo Sanderson, Noah D. Simons, Tony L. Goldberg, Nelson Ting, Colin A. Chapman, Chris Newbold, Matthew Berriman, Adam J. Reid
Software Mentions: 5
Published: over 4 years ago
10.3389/fbioe.2017.00084
Meta-Analysis of Aedes aegypti Expression Datasets: Comparing Virus Infection and Blood-Fed Transcriptomes to Identify Markers of Virus Presence
Cited by: 11
Author(s): Kiyoshi F. Fukutani, José Irahe Kasprzykowski, Alexandre Rossi Paschoal, Matheus de Souza Gomes, Aldina Barral, Camila I. de Oliveira, Pablo Ivan Pereira Ramos, Artur T. L. Queiroz
Software Mentions: 5
Published: almost 7 years ago
10.3389/fcell.2021.630355
Application of Immune Infiltration Signature and Machine Learning Model in the Differential Diagnosis and Prognosis of Bone-Related Malignancies
Cited by: 9
Author(s): Guoqi Li, Yi‐Kai Wang, Hao Zhou, Lin-Guang Jin, Chunyu Wang, Mugahed Abdullah Hasan Albahde, Yan Wu, Hengyuan Li, Wenkan Zhang, Binghao Li
Software Mentions: 5
Published: over 3 years ago
10.3389/fcimb.2020.588155
Proteome and Microbiome Mapping of Human Gingival Tissue in Health and Disease
Cited by: 14
Author(s): Kai Bao, Xiaofei Li, Lucy Poveda, Weihong Qi, Nathalie Selevsek, Pınar Gümüş, Gülnur Emingil, Jonas Grossmann, Patricia I. Diaz, George Hajishengallis, Nagihan Bostancı, Georgios N. Belibasakis
Software Mentions: 5
Published: about 4 years ago
10.3389/fpls.2021.715683
Morphological, Physiological, and Molecular Responses of Sweetly Fragrant Luculia gratissima During the Floral Transition Stage Induced by Short-Day Photoperiod
Cited by: 0
Author(s): Xiongfang Liu, Yat-wah Wan, Jing An, Xiujiao Zhang, Yurong Cao, Zhenghong Li, Xiuxian Liu, Hong Ma
Software Mentions: 5
Published: over 3 years ago
10.3389/fcimb.2021.654074
Intestinal Microbiota Mediates High-Fructose and High-Fat Diets to Induce Chronic Intestinal Inflammation
Cited by: 30
Author(s): Rong Tan, Huiwei Dong, Zhengshan Chen, Min Jin, Jing Yin, Haibei Li, Danyang Shi, Yi-fan Shao, Huaran Wang, Tianjiao Chen, Dong Yang, Jùnwén Lǐ
Software Mentions: 5
Published: over 3 years ago
10.3389/fpls.2021.636652
Non-target Site Herbicide Resistance Is Conferred by Two Distinct Mechanisms in Black-Grass (Alopecurus myosuroides)
Cited by: 25
Author(s): S. Franco Ortega, Alina Goldberg-Cavalleri, Andrew Walker, Melissa Brazier‐Hicks, Nawaporn Onkokesung, Robert Edwards
Software Mentions: 5
Published: over 3 years ago
10.3389/fpls.2018.01256
Comparative Transcriptomic Analysis of Two Actinorhizal Plants and the Legume Medicagotruncatula Supports the Homology of Root Nodule Symbioses and Is Congruent With a Two-Step Process of Evolution in the Nitrogen-Fixing Clade of Angiosperms
Cited by: 14
Author(s): Kai Battenberg, Daniel Potter, Christine A. Tabuloc, Joanna C. Chiu, Alison M. Berry
Software Mentions: 5
Published: about 6 years ago
10.3389/fpls.2018.00641
Detailed Phytochemical Analysis of High- and Low Artemisinin-Producing Chemotypes of Artemisia annua
Cited by: 22
Author(s): Tomasz Czechowski, Tony R. Larson, Theresa M. Catania, David Harvey, Cenxi Wei, Michel Essome, Geoffrey D. Brown, Ian A. Graham
Software Mentions: 5
Published: over 6 years ago
10.3389/fmicb.2020.00925
Disentangling Large- and Small-Scale Abiotic and Biotic Factors Shaping Soil Microbial Communities in an Alpine Cushion Plant System
Cited by: 19
Author(s): Chenyue Wang, Richard Michalet, Ziyang Liu, Xingpei Jiang, Xiangtai Wang, Gaosen Zhang, Lu An, Shuyan Chen, Sa Xiao
Software Mentions: 5
Published: over 4 years ago
10.3389/fpls.2021.715711
Advances on the Visualization of the Internal Structures of the European Mistletoe: 3D Reconstruction Using Microtomography
Cited by: 13
Author(s): Max D. Mylo, Mara Hofmann, Alexander Delp, Ronja Scholz, Frank Walther, Thomas Speck, Olga Speck
Software Mentions: 5
Published: about 3 years ago
10.3389/fpls.2020.00086
Parenchyma Abundance in Wood of Evergreen Trees Varies Independently of Nutrients
Cited by: 12
Author(s): Martyna M. Kotowska, Ian J. Wright, Mark Westoby
Software Mentions: 5
Published: almost 5 years ago
10.3389/fmicb.2021.659179
Investigation of Spaceflight Induced Changes to Astronaut Microbiomes
Cited by: 25
Author(s): Michael D. Morrison, James B. Thissen, Fathi Karouia, Satish K. Mehta, Camilla Urbaniak, Kasthuri Venkateswaran, David J. Smith, Crystal Jaing
Software Mentions: 5
Published: over 3 years ago
10.3389/fmolb.2021.609865
Development and Validation of a Prognostic Gene Signature in Clear Cell Renal Cell Carcinoma
Cited by: 7
Author(s): Chuanchuan Zhan, Zichu Wang, Chao Xu, Xiao Huang, Junzhou Su, Bisheng Chen, Mingshan Wang, Zhihong Qi, Péter Bai
Software Mentions: 5
Published: over 3 years ago
10.3389/fninf.2014.00076
Limits to high-speed simulations of spiking neural networks using general-purpose computers
Cited by: 50
Author(s): Friedemann Zenke, Wulfram Gerstner
Software Mentions: 5
Published: about 10 years ago
10.3389/fninf.2020.563669
NeuroRA: A Python Toolbox of Representational Analysis From Multi-Modal Neural Data
Cited by: 21
Author(s): Zitong Lu, Yixuan Ku
Software Mentions: 5
Published: almost 4 years ago
10.3389/fmicb.2017.00526
Mosquito Microbiome Dynamics, a Background for Prevalence and Seasonality of West Nile Virus
Cited by: 83
Author(s): Eva Nováková, Douglas C. Woodhams, Sonia M. Rodríguez‐Ruano, Robert M. Brucker, Jonathan W. Leff, Amin Maharaj, Amir Almasi‐Hashiani, Rob Knight, James A. Scott
Software Mentions: 5
Published: over 7 years ago
10.1007/s11306-018-1419-8
Identification of a urine metabolite constellation characteristic for kidney allograft rejection
Cited by: 18
Author(s): Miriam C. Banas, Sindy Neumann, Johannes Eiglsperger, Eric Schiffer, Franz Josef Putz, Simone Reichelt-Wurm, Bernhard K. Krämer, Philipp Pagel, Bernhard Banas
Software Mentions: 5
Published: about 6 years ago
10.3389/fmicb.2019.03000
Machine Learning Approach for Candida albicans Fluconazole Resistance Detection Using Matrix-Assisted Laser Desorption/Ionization Time-of-Flight Mass Spectrometry
Cited by: 26
Author(s): Margot Delavy, Lorenzo Cerutti, Antony Croxatto, Guy Prod’hom, Dominique Sanglard, Gilbert Greub, Alix T. Coste
Software Mentions: 5
Published: almost 5 years ago
10.1007/s11306-020-01686-y
A comparison of high-throughput plasma NMR protocols for comparative untargeted metabolomics
Cited by: 15
Author(s): Nikolaos G. Bliziotis, Udo F. H. Engelke, Ruud L. E. G. Aspers, Jasper Engel, Jaap Deinum, Henri J L M Timmers, Ron A. Wevers, Leo A. J. Kluijtmans
Software Mentions: 5
Published: over 4 years ago
10.3390/ijms22042046
Dysregulated Provision of Oxidisable Substrates to the Mitochondria in ME/CFS Lymphoblasts
Cited by: 20
Author(s): Daniel Missailidis, Oana Sanislav, Claire Y. Allan, Paige K. Smith, Sarah J. Annesley, Paul R. Fisher
Software Mentions: 5
Published: almost 4 years ago
10.3390/ijms19113421
Composition and Genetic Diversity of the Nicotiana tabacum Microbiome in Different Topographic Areas and Growth Periods
Cited by: 14
Author(s): Xiaolong Yuan, Min Cao, Xinmin Liu, Yongmei Du, Guoming Shen, Zhongfeng Zhang, Jinhai Li, Peng Zhang
Software Mentions: 5
Published: about 6 years ago
10.3390/metabo8040078
Population-Level Analysis to Determine Parameters That Drive Variation in the Plasma Metabolite Profiles
Cited by: 2
Author(s): Mahmoud Al-Majdoub, Katharina Herzog, Bledar Daka, Martin Magnusson, Lennart Råstam, Ulf Lindblad, Peter Sartipy
Software Mentions: 5
Published: about 6 years ago
10.1186/s12864-020-07107-7
Development and comparison of RNA-sequencing pipelines for more accurate SNP identification: practical example of functional SNP detection associated with feed efficiency in Nellore beef cattle
Cited by: 13
Author(s): Stephanie Lam, J. Zeidan, F. Miglior, Aroa Suárez-Vega, Isabel Gómez-Redondo, Pablo Augusto de Souza Fonseca, Leluo Guan, Sinéad M. Waters, Ángela Cánovas
Software Mentions: 5
Published: about 4 years ago
10.3389/fmicb.2019.02944
Evidence for Co-evolutionary History of Early Diverging Lycopodiaceae Plants With Fungi
Cited by: 12
Author(s): Gian Maria Niccolò Benucci, Delaney Burnard, Lara D. Shepherd, Gregory Bonito, Andrew B. Munkacsi
Software Mentions: 5
Published: almost 5 years ago
10.1186/s12859-016-1228-x
The parameter sensitivity of random forests
Cited by: 91
Author(s): Barbara Huang, Paul C. Boutros
Software Mentions: 5
Published: about 8 years ago
10.3390/md12010098
Exploring Bioactive Properties of Marine Cyanobacteria Isolated from the Portuguese Coast: High Potential as a Source of Anticancer Compounds
Cited by: 53
Author(s): Mário J. Costa, Manuel Francisco Martínez García, João Costa‐Rodrigues, Maria Sofia Costa, Maria J. Ribeiro, Maria Helena Fernandes, P. Barros, Anabela Barreiro, Vı́tor Vasconcelos, Rosário Martíns
Software Mentions: 5
Published: almost 11 years ago
10.1186/s12864-020-6588-y
Comparative genomic analysis reveals high intra-serovar plasticity within Salmonella Napoli isolated in 2005–2017
Cited by: 12
Author(s): Eleonora Mastrorilli, Sara Petrin, Massimiliano Orsini, Alessandra Longo, D. Cozza, Ida Luzzi, Antonia Ricci, Lisa Barco, Carmen Losasso
Software Mentions: 5
Published: over 4 years ago
10.1371/journal.pgen.1005616
Genome-Wide Analysis Reveals Novel Regulators of Growth in Drosophila melanogaster
Cited by: 50
Author(s): Sibylle C. Vonesch, David Lamparter, Trudy F. C. Mackay, Sven Bergmann, Ernst Hafen
Software Mentions: 5
Published: almost 9 years ago
10.3389/fmicb.2019.02372
Phylogeography and Ecological Niche Shape the Cichlid Fish Gut Microbiota in Central American and African Lakes
Cited by: 25
Author(s): Laura Baldo, Joan Lluís Riera, Walter Salzburger, Marta Barluenga
Software Mentions: 5
Published: about 5 years ago
10.1371/journal.pone.0051292
Characterisation and Validation of Insertions and Deletions in 173 Patient Exomes
Cited by: 9
Author(s): Francesco Lescai, Silvia Bonfiglio, Chiara Bacchelli, Estelle Chanudet, Aoife Waters, Sanjay M. Sisodiya, Dalia Kasperavičiūtė, Julie Williams, Denise Harold, John Hardy, Robert Kleta, Sebahattin Çırak, Richard Williams, John C. Achermann, John Anderson, David P. Kelsell, Tom Vulliamy, Henry Houlden, Nicholas W. Wood, Una Marie Sheerin, Gian Paolo Tonini, Donna S. Mackay, Khalid Hussain, Jane C. Sowden, Veronica A. Kinsler, Justyna Osinska, Tony Brooks, Mike Hubank, Philip L. Beales, Elia Stupka
Software Mentions: 5
Published: almost 12 years ago
10.3389/fmicb.2018.01901
Phylogenomic Classification and the Evolution of Clonal Complex 5 Methicillin-Resistant Staphylococcus aureus in the Western Hemisphere
Cited by: 59
Author(s): Lavanya Challagundla, Jinnethe Reyes, Iftekhar Rafiqullah, Daniel O. Sordelli, Gabriela Echániz-Avilés, María Elena Velázquez-Meza, Santiago Castillo-Ramírez, Nahuel Fittipaldi, Michael Feldgarden, Sinéad B. Chapman, Michael S. Calderwood, Lina P Carvajal, Sandra Rincón, Blake Hanson, Paul J. Planet, César A. Arias, Lorena Díaz, D. Ashley Robinson
Software Mentions: 5
Published: over 6 years ago
10.3389/fmicb.2021.711359
Circulating Levels of the Short-Chain Fatty Acid Acetate Mediate the Effect of the Gut Microbiome on Visceral Fat
Cited by: 67
Author(s): Ana Nogal, Panayiotis Louca, Mengjie Zhang, Philippa M Wells, Claire J. Steves, Tim D. Spector, Mario Falchi, Ana M. Valdes, Cristina Menni
Software Mentions: 5
Published: over 3 years ago
10.1371/journal.pgen.1008783
Conditional antagonism in co-cultures of Pseudomonas aeruginosa and Candida albicans: An intersection of ethanol and phosphate signaling distilled from dual-seq transcriptomics
Cited by: 23
Author(s): Georgia Doing, Katja Koeppen, Patricia Occipinti, Colleen E. Harty, Deborah A. Hogan
Software Mentions: 5
Published: over 4 years ago
10.1007/s00401-021-02299-y
Single-cell profiling of myasthenia gravis identifies a pathogenic T cell signature
Cited by: 21
Author(s): Florian Ingelfinger, Sinduya Krishnarajah, Michael H. Kramer, Sebastian G. Utz, Edoardo Galli, Mirjam Lutz, Pascale Zwicky, Ayse U. Akarca, Nicole Puertas Jurado, Can Ulutekin, David Bamert, Corinne C. Widmer, Luca Piccoli, Federica Sallusto, Nicolás Gonzalo Núñez, Teresa Marafioti, Didier Schneiter, Isabelle Opitz, Antonio Lanzavecchia, Hans H. Jung, Donatella De Feo, Sarah Mundt, Bettina Schreiner, Burkhard Becher
Software Mentions: 5
Published: over 3 years ago
10.1371/journal.pgen.1006498
Genetic Variation in the Social Environment Contributes to Health and Disease
Cited by: 73
Author(s): Amelie Baud, Megan K. Mulligan, Francesco Paolo Casale, Jesse Ingels, Casey Bohl, Jacques Crinon, Jean Marie Launay, Jon P. Krohn, Andrés Legarra, Robert W. Williams, Oliver Stegle
Software Mentions: 5
Published: almost 8 years ago