10.1038/sdata.2017.35

A geographically-diverse collection of 418 human gut microbiome pathway genome databases
Cited by: 6
Author(s): Aria S. Hahn, Tomer Altman, Kishori M. Konwar, Niels W. Hanson, Dongjae Kim, David A. Relman, David L. Dill, Steven J. Hallam
Software Mentions: 6
Published: over 9 years ago

10.3389/fped.2021.645060

Altered Gut Microbiota Taxonomic Compositions of Patients With Sepsis in a Pediatric Intensive Care Unit
Cited by: 12
Author(s): Jing Liu, Mingbang Wang, Wei-Ming Chen, Jing Ma, Yi Peng, Mingzhi Zhang, Chuanqing Wang, Gangfeng Yan, Guoping Li
Software Mentions: 6
Published: over 5 years ago

10.1371/journal.pone.0210467

Literature optimized integration of gene expression for organ-specific evaluation of toxicogenomics datasets
Cited by: 0
Author(s): Katerina Taškova, Jean-Fred Fontaine, Ralf Mrowka, Miguel A. Andrade‐Navarro
Software Mentions: 6
Published: almost 8 years ago

10.3389/fpls.2021.622043

Disentangling Environmental Effects on the Tree Species Abundance Distribution and Richness in a Subtropical Forest
Cited by: 9
Author(s): Feng Guo, Jihong Huang, Xu Yue, Junqing Li, Runguo Zang
Software Mentions: 6
Published: over 5 years ago

10.1098/rspb.2021.0582

Disease or drought: environmental fluctuations release zebra from a potential pathogen-triggered ecological trap
Cited by: 7
Author(s): Yen‐Hua Huang, Hendrina Joel, Martina Küsters, Zoë R. Barandongo, Claudine C. Cloete, Axel Hartmann, Pauline L. Kamath, J. Kilian, John K. E. Mfune, Gabriel Shatumbu, Royi Zidon, Wayne M. Getz, Wendy C. Turner
Software Mentions: 6
Published: over 5 years ago

10.1371/journal.pone.0254368

Identification and validation of a novel ferroptosis-related gene model for predicting the prognosis of gastric cancer patients
Cited by: 6
Author(s): Gang Liu, Jianying Ma, Gang Hu, Huan Jin
Software Mentions: 6
Published: over 5 years ago

10.3390/diagnostics11010005

The Role of Urine F2-isoprostane Concentration in Delayed Cerebral Ischemia after Aneurysmal Subarachnoid Haemorrhage—A Poor Prognostic Factor
Cited by: 4
Author(s): Karol Wiśniewski, Marta Popęda, Bartłomiej Tomasik, Michał Bieńkowski, Ernest J. Bobeff, Ludomir Stefańczyk, Krzysztof Tybor, Marlena Hupało, Dariusz J. Jaskólski
Software Mentions: 6
Published: almost 6 years ago

10.1371/journal.pone.0024754

Down-Regulating γ-Gliadins in Bread Wheat Leads to Non-Specific Increases in Other Gluten Proteins and Has No Major Effect on Dough Gluten Strength
Cited by: 74
Author(s): Fernando Pistón, Javier Gil-Humanes, Marta Rodríguez-Quijano, Francisco Barro
Software Mentions: 6
Published: about 15 years ago

10.1155/2021/6635526

Construction and Validation of a Ferroptosis-Related Prognostic Model for Gastric Cancer
Cited by: 33
Author(s): Xiaotao Jiang, Qiaofeng Yan, Linling Xie, Shiqi Xu, Kailin Jiang, Jiahua Huang, Yi Wen, Yanhua Yan, Junhui Zheng, Shiyun Tang, Kechao Nie, Zhihua Zheng, Jinglin Pan, Peng Liu, Yuancheng Huang, Xingrui Yan, Yushan Zou, Xuan Chen, Fengbin Liu, Peiwu Li, Kunhai Zhuang
Software Mentions: 6
Published: over 5 years ago

10.3390/toxins11110624

Analysis of the Use of Cylindrospermopsin and/or Microcystin-Contaminated Water in the Growth, Mineral Content, and Contamination of Spinacia oleracea and Lactuca sativa
Cited by: 22
Author(s): María Llana-Ruiz-Cabello, Ángeles Jos, Ana M. Cameán, Flávio Luís de Oliveira, Aldo Barreiro Felpeto, J.A.T. Machado, Joana Azevedo, Edgar Pinto, Agostinho Almeida, Alexandre Campos, Vítor Vasconcelos, Marisa Freitas
Software Mentions: 6
Published: almost 7 years ago

10.3389/fmicb.2021.701796

L-Canavanine, a Root Exudate From Hairy Vetch (Vicia villosa) Drastically Affecting the Soil Microbial Community and Metabolite Pathways
Cited by: 7
Author(s): Hossein Mardani-Korrani, Masaru Nakayasu, Shinichi Yamazaki, Yosuke Aoki, Rumi Kaida, Takashi Motobayashi, Masaru Kobayashi, Naoko Ohkama‐Ohtsu, Yosei Oikawa, Akifumi Sugiyama, Yoshiharu Fujii
Software Mentions: 6
Published: about 5 years ago

10.1371/journal.pone.0224366

Horizontal seed dispersal by dung beetles reduced seed and seedling clumping, but did not increase short-term seedling establishment
Cited by: 12
Author(s): Lina Adonay Urrea‐Galeano, Ellen Andresen, Rosamond Coates, Francisco Mora Ardila, Alfonso Díaz Rojas, Gabriel Ramos‐Fernández
Software Mentions: 6
Published: about 7 years ago

10.1002/ece3.3272

How shrub encroachment under climate change could threaten pollination services for alpine wildflowers: A case study using the alpine skypilot,<i>Polemonium viscosum</i>
Cited by: 8
Author(s): Jessica A. Kettenbach, Nicole E. Miller‐Struttmann, Zoë Moffett, Candace Galen
Software Mentions: 6
Published: about 9 years ago

10.1002/ece3.6978

Implications of genetic heterogeneity for plant translocation during ecological restoration
Cited by: 2
Author(s): Taylor M. Crow, C. Alex Buerkle, Daniel E. Runcie, Kristina M. Hufford
Software Mentions: 6
Published: almost 6 years ago

10.1002/ece3.5202

Chemical defense of toad tadpoles under risk by four predator species
Cited by: 15
Author(s): Bálint Üveges, Márk Szederkényi, Katharina Mahr, Ágnes M. Móricz, Dániel Krüzselyi, Veronika Bókony, Herbert Hoi, Attila Hettyey
Software Mentions: 6
Published: over 7 years ago

10.1002/ece3.7991

Long‐term changes in occurrence, relative abundance, and reproductive fitness of bat species in relation to arrival of White‐nose Syndrome in West Virginia, USA
Cited by: 9
Author(s): Catherine Johnson, Donald J. Brown, C. J. Sanders, Craig W. Stihler
Software Mentions: 6
Published: about 5 years ago

10.1038/srep06460

Testing an unusual in vivo vessel network model: a method to study angiogenesis in the colonial tunicate Botryllus schlosseri
Cited by: 19
Author(s): Fabio Gasparini, Federico Caicci, Francesca Rigon, Giovanna Zaniolo, Lucia Manni
Software Mentions: 6
Published: about 12 years ago

10.1016/j.isci.2021.102452

Scaling relation between genome length and particle size of viruses provides insights into viral life history
Cited by: 8
Author(s): Harshali V. Chaudhari, Mandar M. Inamdar, Kiran Kondabagil
Software Mentions: 6
Published: over 5 years ago

10.1002/ece3.5568

Host identity and phylogeny shape the foliar endophytic fungal assemblages of <i>Ficus</i>
Cited by: 16
Author(s): Junwei Liu, Jin Zhao, Gang Wang, Chen Jin
Software Mentions: 6
Published: about 7 years ago

10.1098/rsos.170082

Density-dependent coral recruitment displays divergent responses during distinct early life-history stages
Cited by: 54
Author(s): Christopher Doropoulos, Nicolas R. Evensen, Luis A. Gómez-Lemos, Russell C. Babcock
Software Mentions: 5
Published: over 9 years ago

10.3389/fpls.2018.00987

Genome Scans Reveal Homogenization and Local Adaptations in Populations of the Soybean Cyst Nematode
Cited by: 6
Author(s): Anne-Frédérique Gendron St-Marseille, Étienne Lord, Pierre-Yves Véronneau, Jacques Brodeur, Benjamin Mimee
Software Mentions: 5
Published: over 8 years ago

10.3389/fpls.2018.01698

Geography and Environment Shape Landscape Genetics of Mediterranean Alpine Species Silene ciliata Poiret. (Caryophyllaceae)
Cited by: 15
Author(s): Javier Morente‐López, Cristina García, Carlos Lara‐Romero, Alfredo García‐Fernández, David Draper, J. M. Iriondo
Software Mentions: 5
Published: almost 8 years ago

10.3389/fpls.2020.604938

Multiple Small-Effect Alleles of Indica Origin Enhance High Iron-Associated Stress Tolerance in Rice Under Field Conditions in West Africa
Cited by: 8
Author(s): Giovanni Melandri, Mouritala Sikirou, Juan David Arbelaez, Afeez Shittu, Vimal Kumar Semwal, Kadougoudiou Abdourasmane Konate, A. T. Maji, Steven A. Ngaujah, Inoussa Akintayo, Vishnu Govindaraj, Yuxin Shi, Francisco Agosto-Perez, Anthony J. Greenberg, G. N. Atlin, R. Venuprasad, Susan R. McCouch
Software Mentions: 5
Published: almost 6 years ago

10.1016/j.prevetmed.2021.105395

Multiple model triangulation to identify factors associated with lameness in British sheep flocks
Cited by: 5
Author(s): Kate Lewis, Michael J. Green, Jessica D. Witt, Laura Green
Software Mentions: 5
Published: about 5 years ago

10.1371/journal.ppat.1009701

Control of SARS-CoV-2 infection after Spike DNA or Spike DNA+Protein co-immunization in rhesus macaques
Cited by: 11
Author(s): Margherita Rosati, Mahesh Agarwal, Xintao Hu, Santhi Devasundaram, Dimitris Stellas, Bhabadeb Chowdhury, Jenifer Bear, Robert T. Burns, Duncan Donohue, Laurent Pessaint, Hanné Andersen, Mark G. Lewis, Evangelos Terpos, Meletios A. Dimopoulos, Alexander Wlodawer, James I. Mullins, David Venzon, George N. Pavlakis, Barbara K. Felber
Software Mentions: 5
Published: about 5 years ago

10.3389/fpls.2019.00214

Root-Associated Fungal Communities From Two Phenologically Contrasting Silver Fir (Abies alba Mill.) Groups of Trees
Cited by: 18
Author(s): Tina Unuk, Tijana Martinović, Domen Finžgar, Nataša Šibanc, Tine Grebenc, Hojka Kraigher
Software Mentions: 5
Published: over 7 years ago

10.3389/fpls.2020.00086

Parenchyma Abundance in Wood of Evergreen Trees Varies Independently of Nutrients
Cited by: 12
Author(s): Martyna M. Kotowska, Ian J. Wright, Mark Westoby
Software Mentions: 5
Published: over 6 years ago

10.3389/fpls.2021.715711

Advances on the Visualization of the Internal Structures of the European Mistletoe: 3D Reconstruction Using Microtomography
Cited by: 13
Author(s): Max D. Mylo, Mara Hofmann, Alexander Delp, Ronja Scholz, Frank Walther, Thomas Speck, Olga Speck
Software Mentions: 5
Published: about 5 years ago

10.1371/journal.ppat.1008717

Genomic and transcriptomic evidence for descent from Plasmodium and loss of blood schizogony in Hepatocystis parasites from naturally infected red colobus monkeys
Cited by: 17
Author(s): Eerik Aunin, Ulrike Böhme, Theo Sanderson, Noah D. Simons, Tony L. Goldberg, Nelson Ting, Colin A. Chapman, Chris Newbold, Matthew Berriman, Adam J. Reid
Software Mentions: 5
Published: about 6 years ago

10.3389/fpls.2018.00641

Detailed Phytochemical Analysis of High- and Low Artemisinin-Producing Chemotypes of Artemisia annua
Cited by: 22
Author(s): Tomasz Czechowski, Tony R. Larson, Theresa M. Catania, David Harvey, Cenxi Wei, Michel Essome, Geoffrey D. Brown, Ian A. Graham
Software Mentions: 5
Published: over 8 years ago

10.3389/fpls.2018.01256

Comparative Transcriptomic Analysis of Two Actinorhizal Plants and the Legume Medicagotruncatula Supports the Homology of Root Nodule Symbioses and Is Congruent With a Two-Step Process of Evolution in the Nitrogen-Fixing Clade of Angiosperms
Cited by: 14
Author(s): Kai Battenberg, Daniel Potter, Christine A. Tabuloc, Joanna C. Chiu, Alison M. Berry
Software Mentions: 5
Published: about 8 years ago

10.3389/fpls.2021.636652

Non-target Site Herbicide Resistance Is Conferred by Two Distinct Mechanisms in Black-Grass (Alopecurus myosuroides)
Cited by: 25
Author(s): S. Franco Ortega, Alina Goldberg-Cavalleri, Andrew Walker, Melissa Brazier‐Hicks, Nawaporn Onkokesung, Robert Edwards
Software Mentions: 5
Published: over 5 years ago

10.3389/fpls.2021.715683

Morphological, Physiological, and Molecular Responses of Sweetly Fragrant Luculia gratissima During the Floral Transition Stage Induced by Short-Day Photoperiod
Cited by: 0
Author(s): Xiongfang Liu, Yat-wah Wan, Jing An, Xiujiao Zhang, Yurong Cao, Zhenghong Li, Xiuxian Liu, Hong Ma
Software Mentions: 5
Published: about 5 years ago

10.3390/ijms22042046

Dysregulated Provision of Oxidisable Substrates to the Mitochondria in ME/CFS Lymphoblasts
Cited by: 20
Author(s): Daniel Missailidis, Oana Sanislav, Claire Y. Allan, Paige K. Smith, Sarah J. Annesley, Paul R. Fisher
Software Mentions: 5
Published: over 5 years ago

10.1371/journal.pone.0195273

AFLP-based genetic diversity of wild orchardgrass germplasm collections from Central Asia and Western China, and the relation to environmental factors
Cited by: 12
Author(s): Chenglin Zhang, Ming Sun, Xinquan Zhang, Shiyong Chen, Gang Nie, Yan Peng, Linkai Huang, Xiao Ma
Software Mentions: 5
Published: over 8 years ago

10.1371/journal.pone.0183906

Flat and complex temperate reefs provide similar support for fish: Evidence for a unimodal species-habitat relationship
Cited by: 39
Author(s): Avery B. Paxton, Emily A. Pickering, Alyssa M. Adler, James C. Taylor, Charles H. Peterson
Software Mentions: 5
Published: about 9 years ago

10.1038/s41396-021-00923-z

Maize germplasm chronosequence shows crop breeding history impacts recruitment of the rhizosphere microbiome
Cited by: 38
Author(s): Alonso Favela, Martin Bohn, Angela D. Kent
Software Mentions: 5
Published: over 5 years ago

10.1371/journal.pone.0215351

The bacterial communities of the small intestine and stool in children with short bowel syndrome
Cited by: 14
Author(s): Steven L. Zeichner, Emmanuel F. Mongodin, Lauren E. Hittle, Szu-Han Huang, Clarivet Torres
Software Mentions: 5
Published: over 7 years ago

10.1371/journal.pone.0152852

Allelic Variation in Developmental Genes and Effects on Winter Wheat Heading Date in the U.S. Great Plains
Cited by: 58
Author(s): Sarah M. Grogan, Gina Brown‐Guedira, Scott D. Haley, Gregory S. McMaster, Scott D. Reid, J. Spencer Smith, Patrick F. Byrne
Software Mentions: 5
Published: over 10 years ago

10.1371/journal.pone.0193417

Sex- and brain region-specific patterns of gene expression associated with socially-mediated puberty in a eusocial mammal
Cited by: 20
Author(s): Mariela Faykoo-Martinez, D. Ashley Monks, Iva B. Zovkic, Melissa M. Holmes
Software Mentions: 5
Published: over 8 years ago

10.1371/journal.pone.0166969

Hybrid Origins of Citrus Varieties Inferred from DNA Marker Analysis of Nuclear and Organelle Genomes
Cited by: 72
Author(s): Tokurou Shimizu, Akira Kitajima, Kenichi Nonaka, Terutaka Yoshioka, Satoshi Ohta, Shingo Goto, Atsushi Toyoda, Asao Fujiyama, Takako Mochizuki, Hideki Nagasaki, Eli Kaminuma, Yasukazu Nakamura
Software Mentions: 5
Published: almost 10 years ago

10.1093/conphys/coab054

Differential sensitivity to warming and hypoxia during development and long-term effects of developmental exposure in early life stage Chinook salmon
Cited by: 9
Author(s): Annelise M Del Rio, Gabriella N M Mukai, Benjamin T. Martin, Rachel C. Johnson, Nann A. Fangue, Joshua A. Israel, Anne E. Todgham
Software Mentions: 5
Published: almost 6 years ago

10.1128/mBio.00521-21

Patterns of Gene Content and Co-occurrence Constrain the Evolutionary Path toward Animal Association in Candidate Phyla Radiation Bacteria
Cited by: 26
Author(s): Alexander L. Jaffe, Alex D. Thomas, Christine He, Ray Keren, Luis E. Valentin-Alvarado, Patrick Munk, Keith Bouma‐Gregson, Ibrahim Farag, Yuki Amano, Rohan Sachdeva, Patrick T. West
Software Mentions: 5
Published: about 5 years ago

10.1128/mBio.00180-20

Systemic Inflammatory Mediators Are Effective Biomarkers for Predicting Adverse Outcomes in Clostridioides difficile Infection
Cited by: 16
Author(s): Michael G. Dieterle, Rosemary Putler, D. Alexander Perry, Anitha Menon, Lisa Abernathy-Close, Naomi Perlman, Aline Penkevich, Alex Standke, Micah Keidan, Kimberly C. Vendrov, Ingrid L. Bergin, Vincent B. Young, Krishna Rao
Software Mentions: 5
Published: over 6 years ago

10.1128/mBio.03186-19

Fecal Metabolomic Signatures in Colorectal Adenoma Patients Are Associated with Gut Microbiota and Early Events of Colorectal Cancer Pathogenesis
Cited by: 86
Author(s): Minsuk Kim, Emily Vogtmann, David A. Ahlquist, Mary E. Devens, John B. Kisiel, William R. Taylor, Bryan A. White, Vanessa L. Hale, Jaeyun Sung, Nicholas Chia, Rashmi Sinha, Jun Chen
Software Mentions: 5
Published: over 6 years ago

10.1128/mBio.03042-19

Quantitative Framework for Model Evaluation in Microbiology Research Using <i>Pseudomonas aeruginosa</i> and Cystic Fibrosis Infection as a Test Case
Cited by: 83
Author(s): Daniel M. Cornforth, Frances L. Diggle, Jeffrey A. Melvin, Jennifer M. Bomberger, Marvin Whiteley
Software Mentions: 5
Published: over 6 years ago

10.1128/mBio.00311-19

Gut Microbiota and Phytoestrogen-Associated Infertility in Southern White Rhinoceros
Cited by: 32
Author(s): Candace L. Williams, Alexis R. Ybarra, Ashley N. Meredith, Barbara S. Durrant, Christopher W. Tubbs
Software Mentions: 5
Published: over 7 years ago

10.1242/dev.160614

Distinct prophase arrest mechanisms in human male meiosis
Cited by: 24
Author(s): Sabrina Z. Jan, Aldo Jongejan, Cindy M. Korver, Saskia K.M. van Daalen, Ans M.M. van Pelt, Sjoerd Repping, Geert Hamer
Software Mentions: 5
Published: almost 9 years ago

10.3390/diagnostics10040188

Profiling of Circulating microRNAs in Prostate Cancer Reveals Diagnostic Biomarker Potential
Cited by: 21
Author(s): Jacob Fredsøe, Anne Rasmussen, Peter Mouritzen, Marianne Bjerre, Peter Busch Østergren, Mikkel Fode, Michael Borre, Karina D. Sørensen
Software Mentions: 5
Published: over 6 years ago

10.1155/2018/8395651

A Specific Circulating MicroRNA Cluster Is Associated to Late Differential Cardiac Response to Doxorubicin-Induced Cardiotoxicity <i>In Vivo</i>
Cited by: 18
Author(s): Clarissa Ruggeri, Sonia Gioffré, Mattia Chiesa, Marta Buzzetti, Giuseppina Milano, Alessandro Scopece, Laura Castiglioni, Marta Pontremoli, Luigi Sironi, Giulio Pompilio, Gualtiero I. Colombo, Yuri D’Alessandra
Software Mentions: 5
Published: almost 8 years ago

10.1038/s41398-021-01410-x

Obsessive–compulsive symptoms and information seeking during the Covid-19 pandemic
Cited by: 22
Author(s): Alisa M. Loosen, Vasilisa Skvortsova, Tobias U. Hauser
Software Mentions: 5
Published: over 5 years ago

10.7150/thno.57775

Machine learning-assisted immune profiling stratifies peri-implantitis patients with unique microbial colonization and clinical outcomes
Cited by: 20
Author(s): Chin-Wei Wang, Yuning Hao, Riccardo Di Gianfilippo, James V. Sugai, Jiaqian Li, Wang Gong, Kenneth S. Kornman, Hom‐Lay Wang, Nobuhiko Kamada, Yuying Xie, William V. Giannobile, Yu Lei
Software Mentions: 5
Published: almost 6 years ago

10.1007/s00066-019-01522-w

Tumor regression during radiotherapy for non-small cell lung cancer patients using cone-beam computed tomography images
Cited by: 5
Author(s): Janita E. van Timmeren, Wouter van Elmpt, Dirk De Ruysscher, Bart Reymen, Olfred Hansen, Carsten Brink
Software Mentions: 5
Published: about 7 years ago

10.1186/s13395-017-0144-8

Comparison of multiple transcriptomes exposes unified and divergent features of quiescent and activated skeletal muscle stem cells
Cited by: 29
Author(s): Natalia Pietrosemoli, Sébastien Mella, Siham Yennek, Meryem B. Baghdadi, Hiroshi Sakai, Ramkumar Sambasivan, Francesca Pala, Daniela Di Girolamo, Shahragim Tajbakhsh
Software Mentions: 5
Published: almost 9 years ago

10.18632/oncotarget.17462

Epigenome-wide association study in hepatocellular carcinoma: Identification of stochastic epigenetic mutations through an innovative statistical approach
Cited by: 43
Author(s): Davide Gentilini, Stefania Scala, Germano Gaudenzi, Paolo Garagnani, Miriam Capri, Matteo Cescon, Gian Luca Grazi, Maria Giulia Bacalini, Serena Pisoni, Alessandra Dicitore, Luisa Circelli, Sara Santagata, Francesco Izzo, Anna Maria Di Blasio, Luca Persani, Claudio Franceschi, Giovanna Mantovani
Software Mentions: 5
Published: over 9 years ago

10.1002/ece3.4952

Population genomics of rapidly invading lionfish in the Caribbean reveals signals of range expansion in the absence of spatial population structure
Cited by: 20
Author(s): Eleanor K. Bors, Santiago Herrera, James A. Morris, Timothy M. Shank
Software Mentions: 5
Published: over 7 years ago

10.3390/s19030626

Understanding Eye Movement Signal Characteristics Based on Their Dynamical and Fractal Features
Cited by: 6
Author(s): Katarzyna Harężlak, Paweł Kasprowski
Software Mentions: 5
Published: over 7 years ago

10.1038/s41598-021-98782-3

Evaluation of JATSdecoder as an automated text extraction tool for statistical results in scientific reports
Cited by: 5
Author(s): Ingmar Böschen
Software Mentions: 5
Published: about 5 years ago

10.1038/s41598-021-98300-5

Quantifying and predicting antimicrobials and antimicrobial resistance genes in waterbodies through a holistic approach: a study in Minnesota, United States
Cited by: 4
Author(s): Irene Bueno, Amanda Beaudoin, William A. Arnold, Taegyu Kim, Lara Frankson, Timothy M. LaPara, Kaushi S. T. Kanankege, Kristine H. Wammer, Randall S. Singer
Software Mentions: 5
Published: about 5 years ago

10.1038/s41598-021-98176-5

Flow cytometry method for absolute counting and single-cell phenotyping of mycobacteria
Cited by: 5
Author(s): David Barr, Charles Onyango Omollo, Mandy K. Mason, Anastasia Koch, Robert J. Wilkinson, David G. Lalloo, Graeme Meintjes, Valerie Mizrahi, Digby F. Warner, Gerry Davies
Software Mentions: 5
Published: about 5 years ago

10.1038/s41598-021-96378-5

Biogeography of acoustic biodiversity of NW Mediterranean coralligenous reefs
Cited by: 13
Author(s): Lucia Di Iorio, Manon Audax, Julie Déter, Florian Holon, Julie Lossent, Cédric Gervaise, Pierre Boissery
Software Mentions: 5
Published: about 5 years ago

10.1002/ece3.4655

Variation in three community features across habitat types and scales within a 15-ha subtropical evergreen-deciduous broadleaved mixed forest dynamics plot in China
Cited by: 1
Author(s): Feng Guo, Junqing Li, Runguo Zang, Xunru Ai, Lan Yao
Software Mentions: 5
Published: almost 8 years ago

10.1002/ece3.2683

Biodiversity in agricultural landscapes: The effect of apple cultivar on epiphyte diversity
Cited by: 4
Author(s): C. Robin Stevenson, Chantel Davies, Jennifer K. Rowntree
Software Mentions: 5
Published: over 9 years ago

10.1038/srep40170

Simultaneous abrupt shifts in hydrology and fish assemblage structure in a floodplain lake in the central Amazon
Cited by: 66
Author(s): Cristhiana Paula Röpke, Sidinéia Amadio, Jansen Zuanon, Efrem Jorge Gondim Ferreira, Cláudia Pereira de Deus, Tiago Pires, Kirk O. Winemiller
Software Mentions: 5
Published: almost 10 years ago

10.1038/srep33912

Flipper strokes can predict energy expenditure and locomotion costs in free-ranging northern and Antarctic fur seals
Cited by: 25
Author(s): Tiphaine Jeanniard‐du‐Dot, Andrew W. Trites, John P. Y. Arnould, John R. Speakman, Christophe Guinet
Software Mentions: 5
Published: about 10 years ago

10.1038/srep33828

Genetic and environmental influences on the germination of basidiospores in the Cryptococcus neoformans species complex
Cited by: 14
Author(s): Adrian Forsythe, Aaron A. Vogan, Jianping Xu
Software Mentions: 5
Published: about 10 years ago

10.1002/ece3.6273

Cones structure and seed traits of four species of large‐seeded pines: Adaptation to animal‐mediated dispersal
Cited by: 1
Author(s): Manyu Zhang, Chang-Xiang Su, Changhu Lu
Software Mentions: 5
Published: over 6 years ago

10.1002/ece3.7793

Common Buzzards wintering strategies as an effect of weather conditions and geographic barriers
Cited by: 1
Author(s): Emanuel Ștefan Baltag, István Kovács, Lucian Sfîcă
Software Mentions: 5
Published: over 5 years ago

10.1002/ece3.917

Grassland invaders and their mycorrhizal symbionts: a study across climate and invasion gradients
Cited by: 21
Author(s): Rebecca A. Bunn, Ylva Lekberg, Christopher Gallagher, Søren Rosendahl, Philip W. Ramsey
Software Mentions: 5
Published: over 12 years ago

10.1002/ece3.5422

Estimating seed dispersal distance: A comparison of methods using animal movement and plant genetic data on two primate‐dispersed Neotropical plant species
Cited by: 10
Author(s): Tiziana A. Gelmi‐Candusso, Ronald Bialozyt, Darja Slana, Ricardo Zárate Gómez, Eckhard W. Heymann, Katrin Heer
Software Mentions: 5
Published: over 7 years ago

10.1038/s41597-019-0341-x

The Database of Cross-Linguistic Colexifications, reproducible analysis of cross-linguistic polysemies
Cited by: 50
Author(s): Christoph Rzymski, Tiago Tresoldi, Simon J. Greenhill, Mei-Shin Wu, Nathanael E. Schweikhard, Maria Koptjevskaja‐Tamm, Volker Gast, Timotheus Adrianus Bodt, Abbie Hantgan, Gereon A. Kaiping, S. Chang, Yunfan Lai, Natalia Morozova, Heini Arjava, Nataliia Hübler, Ezequiel Koile, Steve Pepper, Mariann Proos, Briana Van Epps, Ingrid Blanco, Carolin Hundt, Sergei Monakhov, Kristina Pianykh, Sallona Ramesh, Russell D. Gray, Robert Forkel, Johann‐Mattis List
Software Mentions: 5
Published: almost 7 years ago

10.3389/fmicb.2020.00925

Disentangling Large- and Small-Scale Abiotic and Biotic Factors Shaping Soil Microbial Communities in an Alpine Cushion Plant System
Cited by: 19
Author(s): Chenyue Wang, Richard Michalet, Ziyang Liu, Xingpei Jiang, Xiangtai Wang, Gaosen Zhang, Lu An, Shuyan Chen, Sa Xiao
Software Mentions: 5
Published: over 6 years ago

10.1038/sdata.2018.136

A merged lung cancer transcriptome dataset for clinical predictive modeling
Cited by: 26
Author(s): Su Bin Lim, Swee Jin Tan, Wan-Teck Lim, Chwee Teck Lim
Software Mentions: 5
Published: over 8 years ago

10.3389/fmicb.2021.659179

Investigation of Spaceflight Induced Changes to Astronaut Microbiomes
Cited by: 25
Author(s): Michael D. Morrison, James B. Thissen, Fathi Karouia, Satish K. Mehta, Camilla Urbaniak, Kasthuri Venkateswaran, David J. Smith, Crystal Jaing
Software Mentions: 5
Published: over 5 years ago

10.3389/fmolb.2021.609865

Development and Validation of a Prognostic Gene Signature in Clear Cell Renal Cell Carcinoma
Cited by: 7
Author(s): Chuanchuan Zhan, Zichu Wang, Chao Xu, Xiao Huang, Junzhou Su, Bisheng Chen, Mingshan Wang, Zhihong Qi, Péter Bai
Software Mentions: 5
Published: over 5 years ago

10.1371/journal.pone.0256568

The absence of fans removes the home advantage associated with penalties called by National Hockey League referees
Cited by: 6
Author(s): Joël Guérette, Caroline Blais, Daniel Fiset
Software Mentions: 5
Published: about 5 years ago

10.3389/fninf.2014.00076

Limits to high-speed simulations of spiking neural networks using general-purpose computers
Cited by: 50
Author(s): Friedemann Zenke, Wulfram Gerstner
Software Mentions: 5
Published: about 12 years ago

10.3389/fninf.2020.563669

NeuroRA: A Python Toolbox of Representational Analysis From Multi-Modal Neural Data
Cited by: 21
Author(s): Zitong Lu, Yixuan Ku
Software Mentions: 5
Published: almost 6 years ago

10.3389/fneur.2020.546744

LesionQuant for Assessment of MRI in Multiple Sclerosis—A Promising Supplement to the Visual Scan Inspection
Cited by: 7
Author(s): Synne Brune, Einar August Høgestøl, Vanja Cengija, Pål Berg‐Hansen, Piotr Sowa, Gro Owren Nygaard, Hanne F. Harbo, Mona K. Beyer
Software Mentions: 5
Published: almost 6 years ago

10.1016/j.schres.2020.04.017

Modeling perception and behavior in individuals at clinical high risk for psychosis: Support for the predictive processing framework
Cited by: 17
Author(s): Eren Kafadar, Vijay A. Mittal, Gregory P. Strauss, Hannah C. Chapman, Lauren M. Ellman, Sonia Bansal, James M. Gold, Ben Alderson-Day, Samuel Evans, Jamie Moffatt, Steven M. Silverstein, Elaine F. Walker, Scott W. Woods, Philip R. Corlett, Albert R. Powers
Software Mentions: 5
Published: almost 6 years ago

10.3389/fnins.2020.620723

Spatiotemporal Processing of Bimodal Odor Lateralization in the Brain Using Electroencephalography Microstates and Source Localization
Cited by: 2
Author(s): Christine Ida Hucke, Rebekka Heinen, Marlene Pacharra, Edmund Wascher, Christoph van Thriel
Software Mentions: 5
Published: almost 6 years ago

10.1371/journal.pone.0204963

Eye behavior does not adapt to expected visual distraction during internally directed cognition
Cited by: 15
Author(s): Sonja Annerer‐Walcher, Christof Körner, Mathias Benedek
Software Mentions: 5
Published: about 8 years ago

10.1155/2021/6641421

Prognostic Models for Nonmetastatic Triple-Negative Breast Cancer Based on the Pretreatment Serum Tumor Markers with Machine Learning
Cited by: 0
Author(s): Huihui Chen, Shijie Wu, Jun Hu, Kun Zhang, Kaimin Hu, Yingfeng Lu, Jiapan He, Tao Pan, Yiding Chen
Software Mentions: 5
Published: over 5 years ago

10.1007/s11306-018-1419-8

Identification of a urine metabolite constellation characteristic for kidney allograft rejection
Cited by: 18
Author(s): Miriam C. Banas, Sindy Neumann, Johannes Eiglsperger, Eric Schiffer, Franz Josef Putz, Simone Reichelt-Wurm, Bernhard K. Krämer, Philipp Pagel, Bernhard Banas
Software Mentions: 5
Published: about 8 years ago

10.1007/s11306-020-01686-y

A comparison of high-throughput plasma NMR protocols for comparative untargeted metabolomics
Cited by: 15
Author(s): Nikolaos G. Bliziotis, Udo F. H. Engelke, Ruud L. E. G. Aspers, Jasper Engel, Jaap Deinum, Henri J L M Timmers, Ron A. Wevers, Leo A. J. Kluijtmans
Software Mentions: 5
Published: over 6 years ago

10.3390/ijms19113421

Composition and Genetic Diversity of the Nicotiana tabacum Microbiome in Different Topographic Areas and Growth Periods
Cited by: 14
Author(s): Xiaolong Yuan, Min Cao, Xinmin Liu, Yongmei Du, Guoming Shen, Zhongfeng Zhang, Jinhai Li, Peng Zhang
Software Mentions: 5
Published: almost 8 years ago

10.3390/metabo8040078

Population-Level Analysis to Determine Parameters That Drive Variation in the Plasma Metabolite Profiles
Cited by: 2
Author(s): Mahmoud Al-Majdoub, Katharina Herzog, Bledar Daka, Martin Magnusson, Lennart Råstam, Ulf Lindblad, Peter Sartipy
Software Mentions: 5
Published: almost 8 years ago

10.3389/fmicb.2018.01901

Phylogenomic Classification and the Evolution of Clonal Complex 5 Methicillin-Resistant Staphylococcus aureus in the Western Hemisphere
Cited by: 59
Author(s): Lavanya Challagundla, Jinnethe Reyes, Iftekhar Rafiqullah, Daniel O. Sordelli, Gabriela Echániz-Avilés, María Elena Velázquez-Meza, Santiago Castillo-Ramírez, Nahuel Fittipaldi, Michael Feldgarden, Sinéad B. Chapman, Michael S. Calderwood, Lina P Carvajal, Sandra Rincón, Blake Hanson, Paul J. Planet, César A. Arias, Lorena Díaz, D. Ashley Robinson
Software Mentions: 5
Published: about 8 years ago

10.3389/fmicb.2019.03000

Machine Learning Approach for Candida albicans Fluconazole Resistance Detection Using Matrix-Assisted Laser Desorption/Ionization Time-of-Flight Mass Spectrometry
Cited by: 26
Author(s): Margot Delavy, Lorenzo Cerutti, Antony Croxatto, Guy Prod’hom, Dominique Sanglard, Gilbert Greub, Alix T. Coste
Software Mentions: 5
Published: almost 7 years ago

10.3389/fmicb.2019.02944

Evidence for Co-evolutionary History of Early Diverging Lycopodiaceae Plants With Fungi
Cited by: 12
Author(s): Gian Maria Niccolò Benucci, Delaney Burnard, Lara D. Shepherd, Gregory Bonito, Andrew B. Munkacsi
Software Mentions: 5
Published: almost 7 years ago

10.1186/s12864-020-07107-7

Development and comparison of RNA-sequencing pipelines for more accurate SNP identification: practical example of functional SNP detection associated with feed efficiency in Nellore beef cattle
Cited by: 13
Author(s): Stephanie Lam, J. Zeidan, F. Miglior, Aroa Suárez-Vega, Isabel Gómez-Redondo, Pablo Augusto de Souza Fonseca, Leluo Guan, Sinéad M. Waters, Ángela Cánovas
Software Mentions: 5
Published: about 6 years ago

10.3389/fmicb.2019.02273

Persistent Core Populations Shape the Microbiome Throughout the Water Column in the North Pacific Subtropical Gyre
Cited by: 15
Author(s): Daniel Mende, Dominique Le Bœuf, Edward F. DeLong
Software Mentions: 5
Published: about 7 years ago

10.1186/s12859-016-1228-x

The parameter sensitivity of random forests
Cited by: 91
Author(s): Barbara Huang, Paul C. Boutros
Software Mentions: 5
Published: about 10 years ago

10.3390/md12010098

Exploring Bioactive Properties of Marine Cyanobacteria Isolated from the Portuguese Coast: High Potential as a Source of Anticancer Compounds
Cited by: 53
Author(s): Mário J. Costa, Manuel Francisco Martínez García, João Costa‐Rodrigues, Maria Sofia Costa, Maria J. Ribeiro, Maria Helena Fernandes, P. Barros, Anabela Barreiro, Vı́tor Vasconcelos, Rosário Martíns
Software Mentions: 5
Published: almost 13 years ago

10.1186/s12864-020-6588-y

Comparative genomic analysis reveals high intra-serovar plasticity within Salmonella Napoli isolated in 2005–2017
Cited by: 12
Author(s): Eleonora Mastrorilli, Sara Petrin, Massimiliano Orsini, Alessandra Longo, D. Cozza, Ida Luzzi, Antonia Ricci, Lisa Barco, Carmen Losasso
Software Mentions: 5
Published: over 6 years ago

10.7554/eLife.54880

Transient intracellular acidification regulates the core transcriptional heat shock response
Cited by: 45
Author(s): Catherine G. Triandafillou, Christopher D. Katanski, Aaron R. Dinner, D. Allan Drummond
Software Mentions: 5
Published: about 6 years ago

10.1371/journal.pgen.1005616

Genome-Wide Analysis Reveals Novel Regulators of Growth in Drosophila melanogaster
Cited by: 50
Author(s): Sibylle C. Vonesch, David Lamparter, Trudy F. C. Mackay, Sven Bergmann, Ernst Hafen
Software Mentions: 5
Published: almost 11 years ago

10.3389/fmicb.2017.00526

Mosquito Microbiome Dynamics, a Background for Prevalence and Seasonality of West Nile Virus
Cited by: 83
Author(s): Eva Nováková, Douglas C. Woodhams, Sonia M. Rodríguez‐Ruano, Robert M. Brucker, Jonathan W. Leff, Amin Maharaj, Amir Almasi‐Hashiani, Rob Knight, James A. Scott
Software Mentions: 5
Published: over 9 years ago

10.1371/journal.pone.0051292

Characterisation and Validation of Insertions and Deletions in 173 Patient Exomes
Cited by: 9
Author(s): Francesco Lescai, Silvia Bonfiglio, Chiara Bacchelli, Estelle Chanudet, Aoife Waters, Sanjay M. Sisodiya, Dalia Kasperavičiūtė, Julie Williams, Denise Harold, John Hardy, Robert Kleta, Sebahattin Çırak, Richard Williams, John C. Achermann, John Anderson, David P. Kelsell, Tom Vulliamy, Henry Houlden, Nicholas W. Wood, Una Marie Sheerin, Gian Paolo Tonini, Donna S. Mackay, Khalid Hussain, Jane C. Sowden, Veronica A. Kinsler, Justyna Osinska, Tony Brooks, Mike Hubank, Philip L. Beales, Elia Stupka
Software Mentions: 5
Published: almost 14 years ago

10.3389/fmed.2017.00153

TruSeq-Based Gene Expression Analysis of Formalin-Fixed Paraffin-Embedded (FFPE) Cutaneous T-Cell Lymphoma Samples: Subgroup Analysis Results and Elucidation of Biases from FFPE Sample Processing on the TruSeq Platform
Cited by: 15
Author(s): Philippe Lefrançois, Michael T. Tetzlaff, Linda Moreau, Andrew Watters, Elena Netchiporouk, Nathalie Provost, Martin Gilbert, Xiao Ni, Denis Sasseville, Madeleine Duvic, Ivan V. Litvinov
Software Mentions: 5
Published: about 9 years ago