pypi: stats | Projects | Ecosyste.ms: Papers

10.3389/fmicb.2019.01573

Microbial Communities of Polymetallic Deposits’ Acidic Ecosystems of Continental Climatic Zone With High Temperature Contrasts
Cited by: 24
Author(s): С. Н. Гаврилов, Aleksei A. Korzhenkov, Ilya V. Kublanov, Rafael Bargiela, Л. В. Замана, Alexandra A. Popova, Stepan V. Toshchakov, Peter N. Golyshin, Olga V. Golyshina
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0168016

Serotypes and Antimicrobial Resistance in Salmonella enterica Recovered from Clinical Samples from Cattle and Swine in Minnesota, 2006 to 2015
Cited by: 51
Author(s): Samuel L. Hong, Albert Rovira, Peter Davies, Christina A. Ahlstrom, Petra Muellner, Aaron Rendahl, Karen Ege Olsen, Jeffrey B. Bender, Scott J. Wells, Andrés Pérez, Julio Álvarez
Software Mentions: 3
Published: almost 8 years ago

10.3389/fmicb.2013.00064

Microbes on the Cliff: Alpine Cushion Plants Structure Bacterial and Fungal Communities
Cited by: 32
Author(s): Julien Roy, Cécile H. Albert, Sébastien Ibanez, Patrick Saccone, Lucie Zinger, Philippe Choler, Jean‐Christophe Clément, Sébastien Lavergne, R. Geremia
Software Mentions: 3
Published: almost 12 years ago

10.1371/journal.pbio.1002388

Adaptation to Temporally Fluctuating Environments by the Evolution of Maternal Effects
Cited by: 88
Author(s): Snigdhadip Dey, Stephen R. Proulx, Henrique Teotónio
Software Mentions: 3
Published: almost 9 years ago

10.1186/s40478-019-0741-3

High-throughput microscopy exposes a pharmacological window in which dual leucine zipper kinase inhibition preserves neuronal network connectivity
Cited by: 12
Author(s): Marlies Verschuuren, Peter Verstraelen, Gerardo Garcıa-Dıaz Barriga, Ines Cilissen, Emma Coninx, Mieke Verslegers, Peter H. Larsen, Rony Nuydens, Winnok H. De Vos
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pgen.1006628

Nucleotide pools dictate the identity and frequency of ribonucleotide incorporation in mitochondrial DNA
Cited by: 55
Author(s): Anders Berglund, Clara Navarrete, Martin K. M. Engqvist, Eike Hoberg, Zsolt Szilágyi, Robert W. Taylor, Claes M. Gustafsson, Maria Falkenberg, Anders R. Clausen
Software Mentions: 3
Published: almost 8 years ago

10.1371/journal.pone.0204425

An improved machine learning pipeline for urinary volatiles disease detection: Diagnosing diabetes
Cited by: 22
Author(s): Andrea S. Martinez-Vernon, James A. Covington, Ramesh P. Arasaradnam, Siavash Esfahani, Nicola O’Connell, Ioannis Kyrou, Richard S. Savage
Software Mentions: 3
Published: about 6 years ago

10.3390/ijms14048000

Proteins Involved in Distinct Phases of Cold Hardening Process in Frost Resistant Winter Barley (Hordeum vulgare L.) cv Luxor
Cited by: 41
Author(s): Iva Hlaváčková, Pavel Vítámvás, Jiří Šantrůček, Klára Kosová, Sylva Zelenková, Ilja Tom Prášil, Jaroslava Ovesná, Radovan Hynek, Milan Kodı́ček
Software Mentions: 3
Published: over 11 years ago

10.3389/fmicb.2020.01362

Data-Independent Acquisition Proteomics Unravels the Effects of Iron Ions on Coronatine Synthesis in Pseudomonas syringae pv. tomato DC3000
Cited by: 5
Author(s): Yan He, Sha Yu, Shaojin Liu, Hao Tian, Chunxin Yu, Weiming Tan, Jie Zhang, Zhaohu Li, Feng Jiang, Liusheng Duan
Software Mentions: 3
Published: over 4 years ago

10.3390/microorganisms9030465

Unraveling the Gut Microbiome of the Invasive Small Indian Mongoose (Urva auropunctata) in the Caribbean
Cited by: 6
Author(s): Anne A.M.J. Becker, KC Hill, Patrick Butaye
Software Mentions: 3
Published: almost 4 years ago

10.1371/journal.pone.0197824

Quantification of chemical and mechanical bioerosion rates of six Caribbean excavating sponge species found on the coral reefs of Curaçao
Cited by: 20
Author(s): Didier M. de Bakker, Alice E. Webb, Lisanne A. van den Bogaart, Steven M. A. C. van Heuven, H.W.G. Meesters, Fleur C. van Duyl
Software Mentions: 3
Published: over 6 years ago

10.7554/eLife.09977

Fast turnover of genome transcription across evolutionary time exposes entire non-coding DNA to de novo gene emergence
Cited by: 105
Author(s): Rafik Neme, Diethard Tautz
Software Mentions: 3
Published: almost 9 years ago

10.1371/journal.pone.0208292

An exploratory study of factors associated with human brucellosis in mainland China based on time-series-cross-section data from 2005 to 2016
Cited by: 5
Author(s): Yun Lin, Mingqing Xu, Xingyu Zhang, Tao Zhang
Software Mentions: 3
Published: over 5 years ago

10.3390/metabo10040152

Network Analysis Provides Insight into Tomato Lipid Metabolism
Cited by: 9
Author(s): Anastasiya Kuhalskaya, Micha Wijesingha Ahchige, Leonardo Perez de Souza, José G. Vallarino, Yariv Brotman, Saleh Alseekh
Software Mentions: 3
Published: over 4 years ago

10.1371/journal.pone.0185644

Characterization of HIV diversity, phylodynamics and drug resistance in Washington, DC
Cited by: 18
Author(s): Marcos Pérez‐Losada, Amanda D. Castel, Brittany Lee Lewis, Michael Kharfen, Charles P. Cartwright, Bruce Huang, Taylor J. Maxwell, Alan E. Greenberg, Keith A. Crandall
Software Mentions: 3
Published: about 7 years ago

10.3390/microorganisms8101582

Bioaminergic Responses in an In Vitro System Studying Human Gut Microbiota–Kiwifruit Interactions
Cited by: 4
Author(s): Shanthi G. Parkar, Carel M. H. Jobsis, Tania Trower, Janine M. Cooney, Duncan Hedderley, Kerry L. Bentley‐Hewitt
Software Mentions: 3
Published: about 4 years ago

10.1098/rsif.2021.0058

Gravity and active acceleration limit the ability of killer flies ( Coenosia attenuata ) to steer towards prey when attacking from above
Cited by: 3
Author(s): Sergio Rossoni, Samuel T. Fabian, Gregory P. Sutton, Paloma T. Gonzalez-Bellido
Software Mentions: 3
Published: over 3 years ago

10.3389/fcimb.2021.585625

Unilateral Intervention in the Sinuses of Rabbits Induces Bilateral Inflammatory and Microbial Changes
Cited by: 0
Author(s): Christian A Lux, James Johnston, Sharon Waldvogel-Thurlow, Camila Dassi, Richard Douglas, Do‐Yeon Cho, Michael W. Taylor, Kristi Biswas
Software Mentions: 3
Published: about 3 years ago

10.18632/oncotarget.25754

Viral DNA integration and methylation of human papillomavirus type 16 in high-grade oral epithelial dysplasia and head and neck squamous cell carcinoma
Cited by: 12
Author(s): Sujita Khanal, Brian S. Shumway, Maryam Zahin, Rebecca Redman, John Strickley, Patrick J. Trainor, N. Shesh, Shin-je Ghim, A. Bennett Jenson, Joongho Joh
Software Mentions: 3
Published: over 6 years ago

10.1038/s41598-021-81639-0

Loss of Parkinson’s susceptibility gene LRRK2 promotes carcinogen-induced lung tumorigenesis
Cited by: 21
Author(s): Chandra B. Lebovitz, Nicole Wretham, Maryam Osooly, Katy Milne, Tia Dash, Shelby Thornton, Basile Tessier‐Cloutier, Paalini Sathiyaseelan, Svetlana Bortnik, Nancy E. Go, Elizabeth C. Halvorsen, Rachel A. Cederberg, Norman S. Chow, Nancy Dos Santos, Kevin L. Bennewith, Brad H. Nelson, Marcel B. Bally, Wan L. Lam, Sharon M. Gorski
Software Mentions: 3
Published: almost 4 years ago

10.1186/s40168-016-0209-7

Microbiota fingerprints lose individually identifying features over time
Cited by: 72
Author(s): David E. Wilkins, Marcus H. Y. Leung, Patrick K. H. Lee
Software Mentions: 3
Published: almost 8 years ago

10.3390/jfmk6020045

Short-Term Periodized Programming May Improve Strength, Power, Jump Kinetics, and Sprint Efficiency in Soccer
Cited by: 4
Author(s): Ai Ishida, S. Kyle Travis, Michael H. Stone
Software Mentions: 3
Published: over 3 years ago

10.3389/fcimb.2020.569685

Thriving Under Stress: Pseudomonas aeruginosa Outcompetes the Background Polymicrobial Community Under Treatment Conditions in a Novel Chronic Wound Model
Cited by: 7
Author(s): Joann Phan, Saba Ranjbar, Miki Kagawa, Matthew Gargus, Allon I. Hochbaum, Katrine Whiteson
Software Mentions: 3
Published: about 4 years ago

10.3390/metabo11080525

Metabolomic Profiling of Adults with Congenital Heart Disease
Cited by: 8
Author(s): Ari Cedars, Cedric Manlhiot, Jong Mi Ko, Teodoro Bottiglieri, Erland Arning, Angela Weingarten, Alexander R. Opotowsky, Shelby Kutty
Software Mentions: 3
Published: over 3 years ago

10.1007/s11306-012-0476-7

Pancreatic carcinoma, pancreatitis, and healthy controls: metabolite models in a three-class diagnostic dilemma
Cited by: 37
Author(s): Alexander Benedikt Leichtle, Uta Ceglarek, Peter Weinert, Christos T. Nakas, Jean‐Marc Nuoffer, Julia Kase, Tim Conrad, Helmut Witzigmann, Joachim Thiery, Georg Martin Fiedler
Software Mentions: 3
Published: about 12 years ago

10.1186/s40168-020-00857-2

Earth microbial co-occurrence network reveals interconnection pattern across microbiomes
Cited by: 202
Author(s): Bin Ma, Yiling Wang, Shudi Ye, Shan Liu, Erinne Stirling, Jack A. Gilbert, Karoline Faust, Rob Knight, Janet K. Jansson, César Cardona, Lisa Röttjers, Jia‐Zhuang Xu
Software Mentions: 3
Published: over 4 years ago

10.1007/s11306-021-01841-z

IonFlow: a galaxy tool for the analysis of ionomics data sets
Cited by: 2
Author(s): Jacopo Iacovacci, Wenjian Lin, Julian L. Griffin, Robert C. Glen
Software Mentions: 3
Published: about 3 years ago

10.1186/s40168-018-0420-9

Correcting for 16S rRNA gene copy numbers in microbiome surveys remains an unsolved problem
Cited by: 428
Author(s): Stilianos Louca, Michael Doebeli, Laura Wegener Parfrey
Software Mentions: 3
Published: almost 7 years ago

10.3389/fimmu.2015.00536

Precision Subtypes of T Cell-Mediated Rejection Identified by Molecular Profiles
Cited by: 4
Author(s): Paul Ostrom Kadota, Zahraa Hajjiri, Patricia W. Finn, David L. Perkins
Software Mentions: 3
Published: about 9 years ago

10.3389/fimmu.2021.749266

Meta-Analysis of Interleukin-2 Receptor Antagonists as the Treatment for Steroid-Refractory Acute Graft-Versus-Host Disease
Cited by: 10
Author(s): Meng Shen, Jingxia Li, Xiao-Hui Zhang, Lei Xu, Yu Wang, Kai-Yan Liu, Xiao‐Jun Huang, Shenda Hong, Xiao‐Dong Mo
Software Mentions: 3
Published: about 3 years ago

10.3389/fimmu.2021.715072

Artificial Intelligence Predicts Severity of COVID-19 Based on Correlation of Exaggerated Monocyte Activation, Excessive Organ Damage and Hyperinflammatory Syndrome: A Prospective Clinical Study
Cited by: 11
Author(s): Olga Krysko, Elena Kondakova, O. S. Vershinina, Elena A. Galova, А С Благонравова, Е. Н. Горшкова, Claus Bachert, Mikhail Ivanchenko, Dmitri V. Krysko, Maria V. Vedunova
Software Mentions: 3
Published: over 3 years ago

10.1371/journal.pgen.1007390

Danger signals activate a putative innate immune system during regeneration in a filamentous fungus
Cited by: 25
Author(s): Elizabeth Medina-Castellanos, José Manuel Villalobos-Escobedo, Meritxell Riquelme, Nick D. Read, Cei Abreu‐Goodger, Alfredo Herrera-Estrella
Software Mentions: 3
Published: almost 6 years ago

10.1371/journal.pone.0208876

Mixed effects approach to the analysis of the stepped wedge cluster randomised trial—Investigating the confounding effect of time through simulation
Cited by: 34
Author(s): Alecia Nickless, Merryn Voysey, John Geddes, Ly-Mee Yu, Thomas R Fanshawe
Software Mentions: 3
Published: almost 6 years ago

10.1186/s12885-021-08541-w

Molecular identification of an immunity- and Ferroptosis-related gene signature in non-small cell lung Cancer
Cited by: 10
Author(s): Taisheng Liu, Honglian Luo, Jinye Zhang, Xiaoshan Hu, Jian Zhang
Software Mentions: 3
Published: over 3 years ago

10.1371/journal.pone.0213061

Subtle temperature increase can interact with individual size and social context in shaping phenotypic traits of a coldwater fish
Cited by: 5
Author(s): Constance LeBlanc, Khaled Horri, Skúli Skúlason, David Benhaïm
Software Mentions: 3
Published: over 5 years ago

10.18632/oncotarget.23642

Potential for subsets of wt-NPM1 primary AML blasts to respond to retinoic acid treatment
Cited by: 9
Author(s): Rodica P. Bunaciu, Robert MacDonald, Feng Gao, Lynn M. Johnson, Jeffrey D. Varner, Xin Wang, Sarah Nataraj, Mónica L. Guzmán, Andrew Yen
Software Mentions: 3
Published: almost 7 years ago

10.3389/fgene.2021.625335

Accounting for Genetic Differences Among Unknown Parents in Bubalus bubalis: A Case Study From the Italian Mediterranean Buffalo
Cited by: 2
Author(s): Mayra Gómez, Dario Rossi, Roberta Cimmino, G. Zullo, Yuri Gombia, Damiano Altieri, R. Di Palo, Stefano Biffani
Software Mentions: 3
Published: almost 4 years ago

10.1371/journal.pone.0189355

Ecological assessment of the marine ecosystems of Barbuda, West Indies: Using rapid scientific assessment to inform ocean zoning and fisheries management
Cited by: 5
Author(s): Benjamin I. Ruttenberg, Jennifer E. Caselle, Andy Estep, Ayana Elizabeth Johnson, Kristen L. Marhaver, Lee J. Richter, Stuart A. Sandin, Mark J. A. Vermeij, Jennifer E. Smith, David Grenda, Abigail Libbin Cannon
Software Mentions: 3
Published: almost 7 years ago

10.1038/s41598-020-75707-0

Efficacy based ginger fingerprinting reveals potential antiproliferative analytes for triple negative breast cancer
Cited by: 8
Author(s): Lingna Zhao, Manali Rupji, Ishita Choudhary, Remus Oşan, Shobhna Kapoor, Hongjie Zhang, Chunhua Yang, Ritu Aneja
Software Mentions: 3
Published: about 4 years ago

10.3390/mps3020039

The Influence of DNA Extraction and Lipid Removal on Human Milk Bacterial Profiles
Cited by: 15
Author(s): Anna Ojo-Okunola, Shantelle Claassen-Weitz, Kilaza Samson Mwaikono, Sugnet Gardner-Lubbe, Heather J. Zar, Mark P. Nicol, Elloise du Toit
Software Mentions: 3
Published: over 4 years ago

10.3389/fgene.2021.597635

A Novel Analysis Method for Evaluating the Interplay of Oxygen and Ionizing Radiation at the Gene Level
Cited by: 4
Author(s): Jeannette Jansen, Patricia Vieten, Francesca Pagliari, Rachel Hanley, Maria Grazia Marafioti, Luca Tirinato, Joao Seco
Software Mentions: 3
Published: over 3 years ago

10.1264/jsme2.ME19110

Distribution of the Harmful Bloom-Forming Cyanobacterium, Microcystis aeruginosa, in 88 Freshwater Environments across Japan
Cited by: 6
Author(s): Takafumi Kataoka, Kako Ohbayashi, Yuki Kobayashi, Hiroyuki Takasu, Susumu Nakano, Ryou Kondo, Yoshikuni Hodoki
Software Mentions: 3
Published: almost 5 years ago

10.1371/journal.pgen.1007658

Whole exome sequencing of ENU-induced thrombosis modifier mutations in the mouse
Cited by: 5
Author(s): Kärt Tomberg, Randal J. Westrick, Emilee N. Kotnik, Audrey C. A. Cleuren, David Siemieniak, Guojing Zhu, Thomas L. Saunders, David Ginsburg
Software Mentions: 3
Published: about 6 years ago

10.1264/jsme2.ME20033

Differential Responses of a Coastal Prokaryotic Community to Phytoplanktonic Organic Matter Derived from Cellular Components and Exudates
Cited by: 5
Author(s): Hiroaki Takebe, Keiko Tominaga, Kentaro Fujiwara, Kazuo Yamamoto, Takashi Yoshida
Software Mentions: 3
Published: almost 5 years ago

10.1186/s12934-020-01341-0

Impact of lignans in oilseed mix on gut microbiome composition and enterolignan production in younger healthy and premenopausal women: an in vitro pilot study
Cited by: 23
Author(s): Giulia Corona, Anna Kreimes, Monica Barone, Silvia Turroni, Patrizia Brigidi, Enver Keleszade, Adele Costabile
Software Mentions: 3
Published: over 4 years ago

10.1016/j.nutres.2021.05.005

Metabolomic changes in severe acute malnutrition suggest hepatic oxidative stress: a secondary analysis
Cited by: 5
Author(s): Mariana Parenti, Shannon McClorry, Elizabeth A. Maga, Carolyn M. Slupsky
Software Mentions: 3
Published: over 3 years ago

10.1111/1751-7915.13863

Transcriptome analysis reveals the roles of nitrogen metabolism and sedoheptulose bisphosphatase pathway in methanol‐dependent growth of Corynebacterium glutamicum
Cited by: 4
Author(s): Liwen Fan, Yu Wang, Jin Qian, Ning Gao, Zhihui Zhang, Xiaomeng Ni, Letian Sun, Qianqian Yuan, Ping Zheng, Jibin Sun
Software Mentions: 3
Published: over 3 years ago

10.3389/fgene.2021.630290

Environmentally Driven Color Variation in the Pearl Oyster Pinctada margaritifera var. cumingii (Linnaeus, 1758) Is Associated With Differential Methylation of CpGs in Pigment- and Biomineralization-Related Genes
Cited by: 5
Author(s): Pierre‐Louis Stenger, Chin‐Long Ky, Céline Reisser, Céline Cosseau, Christoph Grunau, Mickaël Mège, Serge Planes, Jérémie Vidal-Dupiol
Software Mentions: 3
Published: over 3 years ago

10.1371/journal.pone.0205880

Biomass recalcitrance in barley, wheat and triticale straw: Correlation of biomass quality with classic agronomical traits
Cited by: 7
Author(s): Francisco J. Ostos-Garrido, Fernando Pistón, Leonardo D. Gómez, Simon J. McQueen‐Mason
Software Mentions: 3
Published: about 6 years ago

10.1186/s13007-019-0550-5

Computer vision and machine learning enabled soybean root phenotyping pipeline
Cited by: 59
Author(s): Kevin G. Falk, Talukder Z. Jubery, Seyed Vahid Mirnezami, Kyle A. Parmley, Soumik Sarkar, Arti Singh, Baskar Ganapathysubramanian, Asheesh K. Singh
Software Mentions: 3
Published: almost 5 years ago

10.1371/journal.pone.0011285

Characterization of Coastal Urban Watershed Bacterial Communities Leads to Alternative Community-Based Indicators
Cited by: 64
Author(s): Cindy H. Wu, Bram Sercu, Laurie C. Van De Werfhorst, Jakk Wong, Todd Z. DeSantis, Eoin L. Brodie, Terry C. Hazen, Patricia A. Holden, Gary L. Andersen
Software Mentions: 3
Published: over 14 years ago

10.1371/journal.pone.0232970

Pooling individual participant data from randomized controlled trials: Exploring potential loss of information
Cited by: 2
Author(s): Lennard L. van Wanrooij, Marieke P. Hoevenaar‐Blom, Nicola Coley, Tiia Ngandu, Yannick Meiller, Juliette Guillemont, Anna Rosenberg, Cathrien Beishuizen, Eric P. Moll van Charante, Hilkka Soininen, Carol Brayne, Sandrine Andrieu, Miia Kivipelto, Edo Richard
Software Mentions: 3
Published: over 4 years ago

10.1371/journal.pcbi.1006434

A k-mer-based method for the identification of phenotype-associated genomic biomarkers and predicting phenotypes of sequenced bacteria
Cited by: 33
Author(s): Erki Aun, Age Brauer, Veljo Kisand, Tanel Tenson, Maido Remm
Software Mentions: 3
Published: about 6 years ago

10.1371/journal.pone.0174803

Population size, breeding biology and on-land threats of Cape Verde petrel (Pterodroma feae) in Fogo Island, Cape Verde
Cited by: 6
Author(s): Teresa Militão, Herculano Dinis, Laura Zango, Pascual Calabuig, Laura Stefan, Jacob González‐Solís
Software Mentions: 3
Published: over 7 years ago

10.1371/journal.pone.0253855

Identification of average molecular weight (AMW) as a useful chemical descriptor to discriminate liver injury-inducing drugs
Cited by: 1
Author(s): Yuki Shimizu, Takuma Sasaki, Jun-ichi Takeshita, Michiko Watanabe, Ryota Shizu, Takeshi Hosaka, Kouichi Yoshinari
Software Mentions: 3
Published: over 3 years ago

10.1371/journal.pone.0192008

Effects of an EPSPS-transgenic soybean line ZUTS31 on root-associated bacterial communities during field growth
Cited by: 23
Author(s): Guihua Lü, Cheng-Yi Tang, Xiao-Mei Hua, Jing Cheng, Gu-Hao Wang, Yuxia Zhu, Zhang Li-ya, Huixia Shou, Jinliang Qi, Yonghua Yang
Software Mentions: 3
Published: almost 7 years ago

10.1186/1476-072X-12-54

Detecting cancer clusters in a regional population with local cluster tests and Bayesian smoothing methods: a simulation study
Cited by: 9
Author(s): Dorothea Lemke, Volkmar Mattauch, Oliver Heidinger, Edzer Pebesma, Hans‐Werner Hense
Software Mentions: 3
Published: almost 12 years ago

10.1038/s41598-020-75496-6

Investigating the impact of captivity and domestication on limb bone cortical morphology: an experimental approach using a wild boar model
Cited by: 24
Author(s): H. Harbers, Clément Zanolli, Marine Cazenave, Jean‐Christophe Theil, Katia Ortiz, Barbara Blanc, Yann Locatelli, Renate Schafberg, François Lecompte, Isabelle Baly, Flavie Laurens, Cécile Callou, Anthony Herrel, Laurent Puymérail, Thomas Cucchi
Software Mentions: 3
Published: about 4 years ago

10.1093/ije/dyu277

The epigenetic clock is correlated with physical and cognitive fitness in the Lothian Birth Cohort 1936
Cited by: 445
Author(s): Riccardo E. Marioni, Sonia Shah, Allan F. McRae, Stuart J. Ritchie, Graciela Muniz‐Terrera, Sarah E. Harris, Jude Gibson, Paul Redmond, Simon R. Cox, Alison Pattie, Janie Corley, Adele M. Taylor, Lee Murphy, John M. Starr, Steve Horvath, Peter M. Visscher, Naomi R. Wray, Ian J. Deary
Software Mentions: 3
Published: almost 10 years ago

10.1371/journal.pone.0227113

Indicators to distinguish symptom accentuators from symptom producers in individuals with a diagnosed adjustment disorder: A pilot study on inconsistency subtypes using SIMS and MMPI-2-RF
Cited by: 23
Author(s): Cristina Mazza, Graziella Orrù, Franco Burla, Merylin Monaro, Stefano Ferracuti, Marco Colasanti, Paolo Roma
Software Mentions: 3
Published: almost 5 years ago

10.1371/journal.pone.0157585

Assessing the Control of Preservational Environment on Taphonomic and Ecological Patterns in an Oligocene Mammal Fauna from Badlands National Park, South Dakota
Cited by: 2
Author(s): Paige Wilson, Jason R. Moore
Software Mentions: 3
Published: over 8 years ago

10.1371/journal.pone.0174384

Temperature and food quantity effects on the harpacticoid copepod Nitocra spinipes: Combining in vivo bioassays with population modeling
Cited by: 13
Author(s): Josef Koch, Thuy T. Bui, Elin Lundström Belleza, Markus Brinkmann, Henner Hollert, Magnus Breitholtz
Software Mentions: 3
Published: over 7 years ago

10.1155/2011/271563

GenSensor Suite: A Web-Based Tool for the Analysis of Gene and Protein Interactions, Pathways, and Regulation
Cited by: 6
Author(s): Mark Gosink, Sawsan Khuri, Camilo Valdes, Zhijie Jiang, Nicholas F. Tsinoremas
Software Mentions: 3
Published: almost 13 years ago

10.1371/journal.pone.0230007

Citizen science improves our understanding of the impact of soil management on wild pollinator abundance in agroecosystems
Cited by: 17
Author(s): Logan R. Appenfeller, Sarah Lloyd, Zsofia Szendrei
Software Mentions: 3
Published: over 4 years ago

10.1371/journal.pone.0191647

Elasmobranch bycatch in the Italian Adriatic pelagic trawl fishery
Cited by: 14
Author(s): Sara Bonanomi, Jacopo Pulcinella, Caterina Maria Fortuna, Fabrizio Moro, Antonello Sala
Software Mentions: 3
Published: almost 7 years ago

10.1371/journal.pone.0105515

Soil Bacterial Community Response to Differences in Agricultural Management along with Seasonal Changes in a Mediterranean Region
Cited by: 85
Author(s): Annamaria Bevivino, Patrizia Paganin, Giovanni Bacci, Alessandro Florio, Maite Sampedro Pellicer, Maria Cristiana Papaleo, Alessio Mengoni, Luigi Ledda, Renato Fani, Antonio Benedetti, Claudia Dalmastri
Software Mentions: 3
Published: over 10 years ago

10.1038/s41598-020-70605-x

Environmentally-induced parental or developmental conditioning influences coral offspring ecological performance
Cited by: 33
Author(s): Hollie M. Putnam, Raphael Ritson‐Williams, Jolly Ann Cruz, Jennifer Davidson, Ruth D. Gates
Software Mentions: 3
Published: over 4 years ago

10.1371/journal.pcbi.1008886

Personalized brain stimulation for effective neurointervention across participants
Cited by: 13
Author(s): Nienke E. R. van Bueren, Thomas Reed, Vu Nguyen, James G. Sheffield, Sanne H. G. van der Ven, Michael A. Osborne, Evelyn H. Kroesbergen, Roi Cohen Kadosh
Software Mentions: 3
Published: about 3 years ago

10.1371/journal.pone.0217071

Modeling the abundance of two Rhagoletis fly (Diptera: Tephritidae) pests in Washington State, U.S.A.
Cited by: 4
Author(s): Tewodros Wakie, Wee L. Yee, Lisa Neven, Sunil Kumar
Software Mentions: 3
Published: over 5 years ago

10.1186/s12898-018-0208-6

Silicon uptake by a pasture grass experiencing simulated grazing is greatest under elevated precipitation
Cited by: 14
Author(s): James M. W. Ryalls, Ben D. Moore, Scott N. Johnson
Software Mentions: 3
Published: almost 6 years ago

10.1371/journal.pone.0212483

Error-related negativity predicts failure in competitive dual-player video games
Cited by: 10
Author(s): Yusuke Yokota, Takahiro Soshi, Yasushi Naruse
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0134381

Short-Term Fidelity, Habitat Use and Vertical Movement Behavior of the Black Rockfish Sebastes schlegelii as Determined by Acoustic Telemetry
Cited by: 13
Author(s): Yingqiu Zhang, Qiang Xu, Josep Alós, Hui Liu, Qinzeng Xu, Hongsheng Yang
Software Mentions: 3
Published: about 9 years ago

10.1002/pld3.240

Flood resilience loci SUBMERGENCE 1 and ANAEROBIC GERMINATION 1 interact in seedlings established underwater
Cited by: 10
Author(s): Rejbana Alam, Maureen Hummel, Euson Yeung, Anna M. Locke, John Carlos I. Ignacio, Miriam D. Baltazar, Zhenyu Jia, Ismail Am, Endang M. Septiningsih, Julia Bailey‐Serres
Software Mentions: 3
Published: over 4 years ago

10.1038/s41598-020-67970-y

The probabilistic backbone of data-driven complex networks: an example in climate
Cited by: 3
Author(s): Catharina Elisabeth Graafland, José Manuel Gutiérrez, Juan M. López, Diego Pazó, Miguel A. Rodrı́guez
Software Mentions: 3
Published: over 4 years ago

10.1038/s41366-021-00896-1

Effects of adiposity on the human plasma proteome: observational and Mendelian randomisation estimates
Cited by: 22
Author(s): Lucy J Goudswaard, Joshua A. Bell, David A. Hughes, Laura J Corbin, Klaudia Walter, George Davey Smith, Nicole Soranzo, John Danesh, Emanuele Di Angelantonio, Willem H. Ouwehand, Nicholas A. Watkins, David Roberts, Adam S. Butterworth, Ingeborg Hers, Nicholas J. Timpson
Software Mentions: 3
Published: over 3 years ago

10.1038/s41598-020-67340-8

Temporal clustering of prey in wildlife passages provides no evidence of a prey-trap
Cited by: 9
Author(s): April Robin Martinig, Mahnoor Riaz, Colleen Cassady St. Clair
Software Mentions: 3
Published: over 4 years ago

10.1371/journal.pgen.1006880

Filamin actin-binding and titin-binding fulfill distinct functions in Z-disc cohesion
Cited by: 37
Author(s): Nicanor González-Morales, Tristan K. Holenka, Frieder Schöck
Software Mentions: 3
Published: over 7 years ago

10.1371/journal.pone.0236724

Aquaporin expression in the alimentary canal of the honey bee Apis mellifera L. (Hymenoptera: Apidae) and functional characterization of Am_Eglp 1
Cited by: 3
Author(s): Débora Linhares Lino de Souza, José Éduardo Serrão, Immo A. Hansen
Software Mentions: 3
Published: about 4 years ago

10.1371/journal.pone.0241238

Specific ablation of the NCoR corepressor δ splice variant reveals alternative RNA splicing as a key regulator of hepatic metabolism
Cited by: 2
Author(s): Michael L. Goodson, Trina A. Knotts, Emily Campbell, Chelsea Snyder, Benjamin E. Young, Martin L. Privalsky
Software Mentions: 3
Published: about 4 years ago

10.7717/peerj.5872

All you can eat: the functional response of the cold-water coral Desmophyllum dianthus feeding on krill and copepods
Cited by: 9
Author(s): Juan Höfer, Humberto E. González, Jürgen Laudien, Gertraud M. Schmidt, Verena Häussermann, Claudio Richter
Software Mentions: 3
Published: about 6 years ago

10.1186/s12898-018-0204-x

Species-specific interference exerted by the shrub Cistus clusii Dunal in a semi-arid Mediterranean gypsum plant community
Cited by: 1
Author(s): Ana Foronda, Bodil K. Ehlers, Concepción L. Alados, Yolanda Pueyo
Software Mentions: 3
Published: almost 6 years ago

10.1038/s41598-020-63763-5

Stereotypic behaviour predicts reproductive performance and litter sex ratio in giant pandas
Cited by: 12
Author(s): Meghan S. Martin-Wintle, Megan A. Owen, Nathan J. P. Wintle, Guiquan Zhang, Hemin Zhang, Ronald R. Swaisgood
Software Mentions: 3
Published: over 4 years ago

10.1038/s41598-020-63811-0

A cognitively demanding working-memory intervention enhances extinction
Cited by: 12
Author(s): Lycia D. de Voogd, Elizabeth A. Phelps
Software Mentions: 3
Published: over 4 years ago

10.1371/journal.pone.0083176

Fitness Consequences of Northward Dispersal as Possible Adaptation to Climate Change, Using Experimental Translocation of a Migratory Passerine
Cited by: 15
Author(s): Claudia Bürger, Andreas Nord, Jan–Åke Nilsson, Emmanuelle Gilot‐Fromont, Christiaan Both
Software Mentions: 3
Published: almost 11 years ago

10.3390/cancers13081985

Evaluation of PSA and PSA Density in a Multiparametric Magnetic Resonance Imaging-Directed Diagnostic Pathway for Suspected Prostate Cancer: The INNOVATE Trial
Cited by: 11
Author(s): Hayley Pye, Saurabh Singh, Joseph M. Norris, Lina María Carmona Echeverría, Vasilis Stavrinides, Alistair Grey, Eoin Dinneen, Elly Pilavachi, Joey Clemente, Susan Heavey, Urszula Stopka‐Farooqui, Benjamin S. Simpson, Elisenda Bonet-Carné, Dominic Patel, Paul Barker, Keith Burling, Nicola Stevens, Tony Ng, Eleftheria Panagiotaki, David J. Hawkes, Daniel C. Alexander, Manuel Rodriguez–Justo, Alex Freeman, Alex Kirkham, David Atkinson, Clare Allen, Greg Shaw, Teresita Beeston, Mrishta Brizmohun Appayya, Arash Latifoltojar, Edward Johnston, Mark Emberton, Caroline M. Moore, Hashim U. Ahmed, Shonit Punwani, Hayley C. Whitaker
Software Mentions: 3
Published: over 3 years ago

10.1371/journal.pone.0154741

Stability and Longevity in the Publication Careers of U.S. Doctorate Recipients
Cited by: 14
Author(s): Cathelijn J. F. Waaijer, Benoît Macaluso, Cassidy R. Sugimoto, Vincent Larivière
Software Mentions: 3
Published: over 8 years ago

10.3390/ijerph18063176

Multivariate Exploratory Comparative Analysis of LaLiga Teams: Principal Component Analysis
Cited by: 5
Author(s): Claudio A. Casal, José Luís Losada, Daniel Barreira, Rubén Maneiro
Software Mentions: 3
Published: over 3 years ago

10.3390/cancers12092439

Preoperative Fasting and General Anaesthesia Alter the Plasma Proteome
Cited by: 4
Author(s): Ulf Gyllensten, Sofia Bosdotter Enroth, Karin Stålberg, Karin Sundfeldt, Stefan Enroth
Software Mentions: 3
Published: over 4 years ago

10.1371/journal.pmed.1003778

Effectiveness and costs associated with a lay counselor–delivered, brief problem-solving mental health intervention for adolescents in urban, low-income schools in India: 12-month outcomes of a randomized controlled trial
Cited by: 11
Author(s): Kanika Malik, Daniel Michelson, Aoife Doyle, Helen A. Weiss, Giulia Greco, Rooplata Sahu, Eric James, Sonal Mathur, Paulomi M. Sudhir, Michael King, Pim Cuijpers, Bruce F. Chorpita, Christopher G. Fairburn, Vikram Patel
Software Mentions: 3
Published: about 3 years ago

10.1038/s41598-020-62525-7

Decoding of Pain Perception using EEG Signals for a Real-Time Reflex System in Prostheses: A Case Study
Cited by: 22
Author(s): Zied Tayeb, Rohit Bose, Andrei Dragomir, Luke Osborn, Nitish V. Thakor, Gordon Cheng
Software Mentions: 3
Published: over 4 years ago

10.1038/s41598-020-61923-1

A critical evaluation of methods to interpret drug combinations
Cited by: 7
Author(s): Nathaniel Twarog, Michele Connelly, Anang A. Shelat
Software Mentions: 3
Published: over 4 years ago

10.3390/nu12030839

Increase of Akkermansia muciniphila by a Diet Containing Japanese Traditional Medicine Bofutsushosan in a Mouse Model of Non-Alcoholic Fatty Liver Disease
Cited by: 17
Author(s): Mitsue Nishiyama, Nobuhiro Ohtake, Atsushi Kaneko, Naho Tsuchiya, Saburo Imamura, Seiichi Iizuka, Shiori Ishizawa, Akinori Nishi, Masahiro Yamamoto, Akinobu Taketomi, Toru Kono
Software Mentions: 3
Published: over 4 years ago

10.7717/peerj.3552

Landscape metrics as functional traits in plants: perspectives from a glacier foreland
Cited by: 4
Author(s): Tommaso Sitzia, Matteo Dainese, Bertil Krüsi, Duncan McCollin
Software Mentions: 3
Published: over 7 years ago

10.1371/journal.pone.0100037

Methods for Estimating Population Density in Data-Limited Areas: Evaluating Regression and Tree-Based Models in Peru
Cited by: 12
Author(s): Weston Anderson, Seth D. Guikema, B. F. Zaitchik, William Pan
Software Mentions: 3
Published: over 10 years ago

10.7717/peerj.8324

Identification of target genes in neuroinflammation and neurodegeneration after traumatic brain injury in rats
Cited by: 11
Author(s): Jianwei Zhao, Chen Xu, Heli Cao, Lin Zhang, Xuyang Wang, Shiwen Chen
Software Mentions: 3
Published: almost 5 years ago

10.1186/s13046-019-1202-3

FOXM1 promotes hepatocellular carcinoma progression by regulating KIF4A expression
Cited by: 85
Author(s): Guohui Hu, Zheng Yan, Cheng Zhang, Minzhang Cheng, Yizhong Yan, Yiting Wang, Libin Deng, Quqin Lu, Shuhong Luo
Software Mentions: 3
Published: over 5 years ago

10.1186/s12862-016-0698-9

Home-field advantage? evidence of local adaptation among plants, soil, and arbuscular mycorrhizal fungi through meta-analysis
Cited by: 143
Author(s): Megan A. Rúa, Anita Antoninka, Pedro M. Antunes, V. Bala Chaudhary, Catherine A. Gehring, Louis J. Lamit, Bridget J. Piculell, James D. Bever, Catherine A. Zabinski, James F. Meadow, Marc J. Lajeunesse, Brook G. Milligan, Justine Karst, Jason D. Hoeksema
Software Mentions: 3
Published: over 8 years ago

10.1111/acel.12704

Movement decline across lifespan of Caenorhabditis elegans mutants in the insulin/insulin‐like signaling pathway
Cited by: 34
Author(s): Breanne L Newell-Stamper, James R. Cypser, Katerina Kechris, David Kitzenberg, Patricia M. Tedesco, Thomas E. Johnson
Software Mentions: 3
Published: almost 7 years ago

10.1038/s41419-020-03151-z

Age-severity matched cytokine profiling reveals specific signatures in Covid-19 patients
Cited by: 82
Author(s): Roberta Angioni, Ricardo Sánchez‐Rodríguez, Fabio Munari, Nicole Bertoldi, Diletta Arcidiacono, Silvia Cavinato, Davide Marturano, Alice Zaramella, Stefano Realdon, Annamaria Cattelan, Antonella Viola, Barbara Molon
Software Mentions: 3
Published: about 4 years ago

10.1038/s41420-020-00329-4

Gut microbiota patterns associated with somatostatin in patients undergoing pancreaticoduodenectomy: a prospective study
Cited by: 10
Author(s): Guanqun Li, Tao Zhang, Yang WeiGuang, Hao-Liang Zhong, Peng Xiao, Liwei Liu, Yongwei Wang, Hua Chen, Rui Kong, Gang Wang, Hongtao Tan, Xuewei Bai, Yilong Li, Le Li, Bei Sun
Software Mentions: 3
Published: about 4 years ago

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