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10.1002/ece3.5604

Contribution of rare and common species to subterranean species richness patterns
Cited by: 28
Author(s): Petra Bregović, Cene Fišer, Maja Zagmajster
Software Mentions: 4
Published: about 5 years ago

Methylation content sensitive enzyme ddRAD (MCSeEd): a reference-free, whole genome profiling system to address cytosine/adenine methylation changes
Cited by: 12
Author(s): G. Marconi, Stefano Capomaccio, Cinzia Comino, Alberto Acquadro, Ezio Portis, Andrea Porceddu, Emidio Albertini
Software Mentions: 4
Published: about 5 years ago

10.1002/ece3.7799

Disentangling biotic and abiotic drivers of intraspecific trait variation in woody plant seedlings at forest edges
Cited by: 3
Author(s): Shilu Zheng, Bruce L. Webber, Raphaël K. Didham, Chun Chen, Mingjian Yu
Software Mentions: 4
Published: over 3 years ago

10.1002/ece3.1795

Interspecific interactions change the outcome of sexual conflict over prehatching parental investment in the burying beetle<i>Nicrophorus vespilloides</i>
Cited by: 13
Author(s): Ornela De Gasperin, Rebecca M. Kilner
Software Mentions: 4
Published: about 9 years ago

10.3390/e22020153

Selection Consistency of Lasso-Based Procedures for Misspecified High-Dimensional Binary Model and Random Regressors
Cited by: 2
Author(s): Mariusz Kubkowski, Jan Mielniczuk
Software Mentions: 4
Published: almost 5 years ago

10.7554/eLife.60108

Novel cell types and developmental lineages revealed by single-cell RNA-seq analysis of the mouse crista ampullaris
Cited by: 21
Author(s): Brent A. Wilkerson, Heather L Zebroski, Connor Finkbeiner, Alex Chitsazan, Kathy Beach, Nilasha Sen, Renee C Zhang, Olivia Bermingham‐McDonogh
Software Mentions: 4
Published: over 3 years ago

10.1038/s41598-019-50217-w

Microbiome-Transcriptome Interactions Related to Severity of Respiratory Syncytial Virus Infection
Cited by: 28
Author(s): Abhijeet R. Sonawane, Tian Liang, Chin Yi Chu, Xing Qiu, Lu Wang, Jeanne Holden‐Wiltse, Alex Grier, Steven R. Gill, Mary T. Caserta, Ann R. Falsey, David J. Topham, Edward E. Walsh, Thomas J. Mariani, Scott T. Weiss, Edwin K. Silverman, Kimberly Glass, Yang Yu Liu
Software Mentions: 4
Published: about 5 years ago

10.1371/journal.pone.0257882

Angler and environmental influences on walleye Sander vitreus and muskellunge Esox masquinongy angler catch in Escanaba Lake, Wisconsin 2003–2015
Cited by: 5
Author(s): Stephanie L. Shaw, Kathryn M. Renik, Greg G. Sass
Software Mentions: 4
Published: about 3 years ago

10.1289/EHP172

A Systematic Comparison of Linear Regression–Based Statistical Methods to Assess Exposome-Health Associations
Cited by: 143
Author(s): Lydiane Agier, Lützen Portengen, Marc Chadeau‐Hyam, Xavier Basagaña, Lise Giorgis-Allemand, Valérie Siroux, Oliver Robinson, Jelle Vlaanderen, Juan R. González, Mark Nieuwenhuijsen, Paolo Víneis, Martine Vrijheid, Rémy Slama, Roel Vermeulen
Software Mentions: 4
Published: almost 8 years ago

10.1111/1462-2920.14608

Closely related viruses of the marine picoeukaryotic alga <i>Ostreococcus lucimarinus</i> exhibit different ecological strategies
Cited by: 15
Author(s): Amy Zimmerman, Charles Bachy, Xiufeng Ma, Simon Roux, Ho Bin Jang, Matthew B. Sullivan, Jacob R. Waldbauer, Alexandra Z. Worden
Software Mentions: 4
Published: over 5 years ago

10.1016/j.envsoft.2018.02.011

Modelling background air pollution exposure in urban environments: Implications for epidemiological research
Cited by: 27
Author(s): Álvaro Gómez-Losada, José C.M. Pires, Rafael Pino‐Mejías
Software Mentions: 4
Published: over 6 years ago

10.1038/s41598-019-45364-z

Disease-free monoculture farming by fungus-growing termites
Cited by: 31
Author(s): Saria Otani, Victoria L. Challinor, Nina B. Kreuzenbeck, Sara Kildgaard, Søren Krath Christensen, Louise Lee Munk Larsen, Duur K. Aanen, Silas Anselm Rasmussen, Christine Beemelmanns, Michael Poulsen
Software Mentions: 4
Published: over 5 years ago

10.1093/eurheartj/ehz100

Associations between vascular risk factors and brain MRI indices in UK Biobank
Cited by: 184
Author(s): Simon R. Cox, Donald M. Lyall, Stuart J. Ritchie, Mark E. Bastin, Mathew A. Harris, Colin R Buchanan, Chloë Fawns-Ritchie, Miruna C. Barbu, Laura de Nooij, Lianne M. Reus, Clara Alloza, Xueyi Shen, Emma Neilson, Helen L. Alderson, Stuart Hunter, David C. Liewald, Heather C. Whalley, Andrew M. McIntosh, Stephen M. Lawrie, Jill P. Pell, Elliot M. Tucker‐Drob, Joanna M. Wardlaw, Catharine R. Gale, Ian J. Deary
Software Mentions: 4
Published: over 5 years ago

10.1038/s41598-019-40992-x

A comparison between the abdominal and femoral adipose tissue proteome of overweight and obese women
Cited by: 18
Author(s): Max Vogel, Ping Wang, Freek G. Bouwman, Nicole Hoebers, Ellen E. Blaak, Johan Renes, E.C.M. Mariman, Gijs H. Goossens
Software Mentions: 4
Published: over 5 years ago

10.1038/s41598-018-34162-8

Remotely-sensed productivity clusters capture global biodiversity patterns
Cited by: 16
Author(s): Nicholas C. Coops, Sean P. Kearney, Douglas K. Bolton, Volker C. Radeloff
Software Mentions: 4
Published: about 6 years ago

10.1155/2016/3159617

The Difference between the Two Representative Kampo Formulas for Treating Dysmenorrhea: An Observational Study
Cited by: 15
Author(s): Tetsuhiro Yoshino, Kotoe Katayama, Yuko Horiba, Kaori Munakata, Rui Yamaguchi, Seiya Imoto, Satoru Miyano, Hideki Mima, Kenji Watanabe, Masaru Mimura
Software Mentions: 4
Published: almost 9 years ago

10.1038/s41598-018-31659-0

An integrated genomic analysis of anaplastic meningioma identifies prognostic molecular signatures
Cited by: 48
Author(s): Grace Collord, Patrick Tarpey, Natalja Kurbatova, Iñigo Martincorena, Sebastián Morán, Manuel Castro, Tibor Nagy, Graham R. Bignell, Francesco Maura, Matthew D. Young, Jorge Berna, José M. C. Tubío, Christopher E McMurran, Adam M. H. Young, Mathijs A. Sanders, Imran Noorani, Stephen J. Price, Colin Watts, Elke Leipnitz, Matthias Kirsch, Gabriele Schackert, Danita M. Pearson, Abel Devadass, Zvi Ram, V. Peter Collins, Kieren Allinson, Michael D. Jenkinson, Rasheed Zakaria, Khaja Syed, C. Oliver Hanemann, Jemma Dunn, Michael W. McDermott, Ramez Kirollos, George S. Vassiliou, Manel Esteller, Sam Behjati, Alvis Brāzma, Thomas Santarius, Ultan McDermott
Software Mentions: 4
Published: about 6 years ago

10.1038/s41598-018-28939-0

Agulhas Current properties shape microbial community diversity and potential functionality
Cited by: 10
Author(s): Sandra Phoma, Surendra Vikram, Janet Jansson, Isabelle Ansorge, Don A. Cowan, Yves Van de Peer, Thulani P. Makhalanyane
Software Mentions: 4
Published: over 6 years ago

10.1111/eva.12861

Novel signals of adaptive genetic variation in northwestern Atlantic cod revealed by whole‐genome sequencing
Cited by: 30
Author(s): Gemma V. Clucas, Runyang Nicolas Lou, Nina Overgaard Therkildsen, Adrienne I. Kovach
Software Mentions: 4
Published: about 5 years ago

10.1111/eva.13234

Association of putatively adaptive genetic variation with climatic variables differs between a parasite and its host
Cited by: 5
Author(s): Sheree J. Walters, Todd Robinson, Margaret Byrne, Grant Wardell‐Johnson, Paul Nevill
Software Mentions: 4
Published: over 3 years ago

10.1111/eva.13200

Evolution of honey resistance in experimental populations of bacteria depends on the type of honey and has no major side effects for antibiotic susceptibility
Cited by: 5
Author(s): Anna M. Bischofberger, Katia R. Pfrunder‐Cardozo, Michael Baumgärtner, Alex R. Hall
Software Mentions: 4
Published: over 3 years ago

10.1038/s41598-018-27340-1

Evidence of indiscriminate fishing effects in one of the world’s largest inland fisheries
Cited by: 79
Author(s): Peng Bun Ngor, Kevin S. McCann, Gaël Grenouillet, Nam So, Bailey C. McMeans, Evan D. G. Fraser, Sovan Lek
Software Mentions: 4
Published: over 6 years ago

10.1038/s41598-018-26125-w

Predicting transmission blocking potential of anti-malarial compounds in the Mosquito Feeding Assay using Plasmodium falciparum Male Gamete Inhibition Assay
Cited by: 22
Author(s): Gonzalo Colmenarejo, Sonia Lozano, Carolina González-Cortés, David Calvo, Juliana Sanchez-Garcia, Jesús-Luís Presa Matilla, Didier Leroy, Janneth Rodrigues
Software Mentions: 4
Published: over 6 years ago

10.1038/s41598-018-25698-w

Live-cell imaging of nuclear–chromosomal dynamics in bovine in vitro fertilised embryos
Cited by: 21
Author(s): Tatsuma Yao, Rie Suzuki, Natsuki Furuta, Yuka Suzuki, Kyoko Kabe, Mikiko Tokoro, Atsushi Sugawara, Akira Yajima, Tomohiro Nagasawa, S. Matoba, Kazuya Yamagata, Satoshi Sugimura
Software Mentions: 4
Published: over 6 years ago

10.3390/ijms20194665

Unravelling the Metabolic and Hormonal Machinery During Key Steps of Somatic Embryogenesis: A Case Study in Coffee
Cited by: 15
Author(s): Rayan Awada, Claudine Campa, Estelle Gibault, Eveline Déchamp, Frédéric Georget, Maud Lepelley, Cécile Abdallah, Alexender Erban, Federico Martinez‐Seidel, Joachim Kopka, Laurent Legendre, Sophie Léran, Geneviève Conéjéro, Jean‐Luc Verdeil, Dominique Crouzillat, D. Breton, Benoît Bertrand, Hervé Etienne
Software Mentions: 4
Published: about 5 years ago

10.1038/s41598-018-23957-4

Differences in DNA Methylation and Functional Expression in Lactase Persistent and Non-persistent Individuals
Cited by: 28
Author(s): Milena Leseva, Richard J. Grand, Hagen Klett, Melanie Boerries, Hauke Busch, Alexandra M. Binder, Karin B. Michels
Software Mentions: 4
Published: over 6 years ago

10.12688/f1000research.25540.1

Population structure of Salmonella enterica serotype Mbandaka reveals similar virulence potential irrespective of source and phylogenomic stratification
Cited by: 2
Author(s): Linto Antony, Gavin Fenske, Radhey S. Kaushik, T. G. Nagaraja, M. G. Thomas, Joy Scaria
Software Mentions: 4
Published: about 4 years ago

10.1038/s41598-018-20983-0

Trace metals from historical mining sites and past metallurgical activity remain bioavailable to wildlife today
Cited by: 41
Author(s): Estelle Camizuli, Renaud Scheifler, Stéphane Garnier, Fabrice Monna, R. Losno, Claude Gourault, Gilles Hamm, Caroline Lachiche, Guillaume Delivet, Carmela Château, Paul Alibert
Software Mentions: 4
Published: almost 7 years ago

10.12688/f1000research.4856.2

Thrombocytosis portends adverse prognostic significance in patients with stage II colorectal carcinoma
Cited by: 12
Author(s): Tianhua Guo, Marcin Krzystanek, Zoltán Szállási, A Szállaśi
Software Mentions: 4
Published: about 10 years ago

10.12688/f1000research.2-71.v2

Using Akaike's information theoretic criterion in mixed-effects modeling of pharmacokinetic data: a simulation study
Cited by: 17
Author(s): Erik Olofsen, Albert Dahan
Software Mentions: 4
Published: over 10 years ago

10.1038/s41598-017-13091-y

Racial disparities in patient survival and tumor mutation burden, and the association between tumor mutation burden and cancer incidence rate
Cited by: 35
Author(s): Wensheng Zhang, Andrea Edwards, Erik K. Flemington, Kun Zhang
Software Mentions: 4
Published: about 7 years ago

10.3389/fnagi.2020.00059

Gamified Motor Training With Tangible Robots in Older Adults: A Feasibility Study and Comparison With the Young
Cited by: 5
Author(s): Arzu Güneysu Özgür, Maximilian J. Wessel, Jennifer K. Olsen, Wafa Johal, Ayberk Özgür, Friedhelm C. Hummel, Pierre Dillenbourg
Software Mentions: 4
Published: over 4 years ago

10.1038/s41598-017-03665-1

Integrated analysis and transcript abundance modelling of H3K4me3 and H3K27me3 in developing secondary xylem
Cited by: 20
Author(s): Steven G. Hussey, Mattheus Theodor Loots, Karen Van der Merwe, Eshchar Mizrachi, Alexander Andrew Myburg
Software Mentions: 4
Published: over 7 years ago

10.3389/fcell.2020.00067

Fc-Linked IgG N-Glycosylation in FcγR Knock-Out Mice
Cited by: 6
Author(s): Olga O. Zaytseva, Michaela Seeling, Jasminka Krištić, Gordan Lauc, Marija Pezer, Falk Nimmerjahn
Software Mentions: 4
Published: over 4 years ago

10.1371/journal.pone.0230490

Year-round temporal stability of a tropical, urban plant-pollinator network
Cited by: 15
Author(s): Alyssa B. Stewart, Pattharawadee Waitayachart
Software Mentions: 4
Published: over 4 years ago

10.3389/fcimb.2021.665159

Beneficial Effect of Alkaloids From Sophora alopecuroides L. on CUMS-Induced Depression Model Mice via Modulating Gut Microbiota
Cited by: 18
Author(s): Ming Zhang, Aoqiang Li, Qifang Yang, Jingyi Li, Lihua Wang, Xiuxian Liu, Yanxin Huang, Lei Liu
Software Mentions: 4
Published: over 3 years ago

10.1186/s13059-020-02007-1

Influenza infection elicits an expansion of gut population of endogenous Bifidobacterium animalis which protects mice against infection
Cited by: 62
Author(s): Qiang Zhang, Jin Hu, Jia-Wu Feng, Xiaoru Hu, Wang Ting, Wenxiao Gong, Kun Huang, Yi-Xiong Guo, Zhong Zou, Xian Lin, Run Zhou, Yuqi Yuan, Anding Zhang, Hong Wei, Gang Cao, Chen Liu, Lingling Chen, Meilin Jin
Software Mentions: 4
Published: over 4 years ago

10.1186/s13059-018-1439-8

Hepatic steatosis risk is partly driven by increased de novo lipogenesis following carbohydrate consumption
Cited by: 77
Author(s): Francis Wb Sanders, Animesh Acharjee, Celia G. Walker, Luke C. Marney, Lee D. Roberts, Fumiaki Imamura, Benjamin Jenkins, Jack Case, Sumantra Ray, Samuel Virtue, António Vidal-Puig, Diana Kuh, Rebecca Hardy, Michael Allison, Nita G. Forouhi, Andrew J. Murray, Nicholas J. Wareham, Michèle Vacca, Albert Koulman, Julian L. Griffin
Software Mentions: 4
Published: over 6 years ago

10.3389/fgene.2020.614888

Integrated Analysis of Immunity- and Ferroptosis-Related Biomarker Signatures to Improve the Prognosis Prediction of Hepatocellular Carcinoma
Cited by: 41
Author(s): Xuanlong Du, Zhang Ye-wei
Software Mentions: 4
Published: almost 4 years ago

10.3389/fgene.2020.00952

The Association Analysis of GPNMB rs156429 With Clinical Manifestations in Chinese Population With Parkinson's Disease
Cited by: 1
Author(s): Jin Liu, Gen Li, Yanfang He, Guoping He, Pingchen Zhang, Xin Shen, Weishan Zhang, Shengdi Chen, Shishuang Cui, Yuyan Tan
Software Mentions: 4
Published: about 4 years ago

10.3389/fgene.2019.00826

Evaluation of DNA Extraction Methods on Individual Helminth Egg and Larval Stages for Whole-Genome Sequencing
Cited by: 27
Author(s): Stephen R. Doyle, Geetha Sankaranarayanan, Fiona Allan, Duncan Berger, Pablo David Jimenez Castro, James B. Collins, Thomas Crellen, María A. Duque-Correa, Peter Ellis, Tegegn G. Jaleta, Roz Laing, Kirsty Maitland, Catherine McCarthy, Tchonfienet Moundai, Ben Softley, Elizabeth A. Thiele, Philippe Tchindebet Ouakou, John Vianney Tushabe, Joanne P. Webster, Adam Weiss, James B. Lok, Eileen Devaney, Ray M. Kaplan, James A. Cotton, Matthew Berriman, Nancy Holroyd
Software Mentions: 4
Published: about 5 years ago

10.1038/s41436-019-0519-9

Comorbidity landscape of the Danish patient population affected by chromosome abnormalities
Cited by: 10
Author(s): Isabella Friis Jørgensen, Francesco Russo, Anders B. Jensen, David Westergaard, Mette Lademann, Jessica Xin Hu, Søren Brunak, Kirstine Belling
Software Mentions: 4
Published: about 5 years ago

10.3390/genes12070971

Direct Measurement of B Lymphocyte Gene Expression Biomarkers in Peripheral Blood Transcriptomics Enables Early Prediction of Vaccine Seroconversion
Cited by: 2
Author(s): Dan Huang, Alex Y. N. Liu, Kwong-Sak Leung, Nelson L.S. Tang
Software Mentions: 4
Published: over 3 years ago

10.3390/ijms21031078

Gene Expression Signature Predictive of Neuroendocrine Transformation in Prostate Adenocarcinoma
Cited by: 21
Author(s): Paola Ostano, Maurizia Mello-Grand, Debora Sesia, Ilaria Gregnanin, Caterina Peraldo-Neia, Francesca Guana, Elena Jachetti, Antonella Farsetti, Giovanna Chiorino
Software Mentions: 3
Published: almost 5 years ago

10.1371/journal.pone.0179191

Leveraging genomic prediction to scan germplasm collection for crop improvement
Cited by: 28
Author(s): Leonardo de Azevedo Peixoto, Tara C. Moellers, Jiaoping Zhang, Aaron J. Lorenz, William D. Beavis, Asheesh K. Singh
Software Mentions: 3
Published: over 7 years ago

10.1371/journal.pone.0131875

Context-Specific Metabolic Model Extraction Based on Regularized Least Squares Optimization
Cited by: 41
Author(s): Semidán Robaina-Estévez, Zoran Nikoloski
Software Mentions: 3
Published: over 9 years ago

10.1371/journal.pone.0139201

Global Food Demand Scenarios for the 21st Century
Cited by: 165
Author(s): Benjamin Leon Bodirsky, Susanne Rolinski, Anne Biewald, Isabelle Weindl, Alexander Popp, Hermann Lotze‐Campen
Software Mentions: 3
Published: about 9 years ago

10.1371/journal.pone.0156143

Resilience of Key Biological Parameters of the Senegalese Flat Sardinella to Overfishing and Climate Change
Cited by: 22
Author(s): Kamarel Bâ, Modou Thiaw, Najih Lazar, Alassane Sarr, Timothée Brochier, Ismaïla Abderhamane Ndiaye, A. Faye, Oumar Sadio, Jacques Panfili, Omar Thiom Thiaw, Patrice Brehmer
Software Mentions: 3
Published: over 8 years ago

10.1371/journal.pone.0062726

The Use of Colorimetric Sensor Arrays to Discriminate between Pathogenic Bacteria
Cited by: 47
Author(s): Claire L. Lonsdale, Brian Taba, Núria Queraltó, Roman A. Lukaszewski, Raymond A. Martino, Paul Rhodes, Sung Hee Lim
Software Mentions: 3
Published: over 11 years ago

10.1371/journal.pone.0192843

Flogging tired horses: Who wants whipping and who would walk away if whipping horses were withheld?
Cited by: 9
Author(s): Paul D. McGreevy, Mark D. Griffiths, Frank R. Ascione, Bethany Wilson
Software Mentions: 3
Published: almost 7 years ago

10.1371/journal.pone.0235530

Decipher the complexity of cis-regulatory regions by a modified Cas9
Cited by: 0
Author(s): Steven Kirchner, Stefanie Reuter, Anika Westphal, Ralf Mrowka
Software Mentions: 3
Published: over 4 years ago

10.1371/journal.pone.0192008

Effects of an EPSPS-transgenic soybean line ZUTS31 on root-associated bacterial communities during field growth
Cited by: 23
Author(s): Guihua Lü, Cheng-Yi Tang, Xiao-Mei Hua, Jing Cheng, Gu-Hao Wang, Yuxia Zhu, Zhang Li-ya, Huixia Shou, Jinliang Qi, Yonghua Yang
Software Mentions: 3
Published: almost 7 years ago

10.1371/journal.pone.0220619

Gut microbiome response to a modern Paleolithic diet in a Western lifestyle context
Cited by: 55
Author(s): Monica Barone, Silvia Turroni, Simone Rampelli, Matteo Soverini, Federica D’Amico, Elena Biagi, Patrizia Brigidi, Emidio Troiani, Marco Candela
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0044260

Plasma Based Markers of [11C] PiB-PET Brain Amyloid Burden
Cited by: 82
Author(s): Steven J. Kiddle, Madhav Thambisetty, Andrew Simmons, Joanna Riddoch-Contreras, Abdul Hye, Eric Westman, Ian Pike, Malcolm Ward, Caroline Johnston, Michelle K. Lupton, Katie Lunnon, Hilkka Soininen, Iwona Kłoszewska, Magda Tsolaki, Bruno Vellas, Patrizia Mecocci, Simon Lovestone, Stephen J. Newhouse, Richard Dobson, Alzheimer’s Disease Neuroimaging Initiative
Software Mentions: 3
Published: about 12 years ago

10.1371/journal.pone.0244435

The effect of tree age, daily sap volume and date of sap collection on the content of minerals and heavy metals in silver birch (Betula pendula Roth) tree sap
Cited by: 4
Author(s): Paweł Staniszewski, Maciej Bilek, Wojciech Szwerc, R. Tomusiak, Paweł Osiak, Ryszard Kocjan, Tadeusz Moskalik
Software Mentions: 3
Published: almost 4 years ago

10.1371/journal.pone.0164295

Cross-Species Analysis of Gene Expression and Function in Prefrontal Cortex, Hippocampus and Striatum
Cited by: 12
Author(s): Wei Chen, Xiayu Xia, Nan Song, Ying Wang, Hua Zhu, Wei Deng, Qi Kong, Xianmin Pan, Chuan Qin
Software Mentions: 3
Published: about 8 years ago

10.1371/journal.pone.0100668

Leaf and Root-Associated Fungal Assemblages Do Not Follow Similar Elevational Diversity Patterns
Cited by: 95
Author(s): Aurore Coince, Tristan Cordier, Juliette Lengellé, Emmanuel Defossez, Corinne Vacher, Cécile Robin, Marc Buée, Benoît Marçais
Software Mentions: 3
Published: over 10 years ago

10.1371/journal.pone.0230007

Citizen science improves our understanding of the impact of soil management on wild pollinator abundance in agroecosystems
Cited by: 17
Author(s): Logan R. Appenfeller, Sarah Lloyd, Zsofia Szendrei
Software Mentions: 3
Published: over 4 years ago

10.1371/journal.pone.0225791

Does historical land use affect the regional distribution of fleshy-fruited woody plants?
Cited by: 7
Author(s): Matilda Arnell, Sara A. O. Cousins, Ove Eriksson
Software Mentions: 3
Published: almost 5 years ago

10.1371/journal.pone.0176630

Seagrass blue carbon spatial patterns at the meadow-scale
Cited by: 68
Author(s): Matthew P. J. Oreska, Karen J. McGlathery, John H. Porter
Software Mentions: 3
Published: over 7 years ago

10.1371/journal.pone.0084572

Phyllostomid Bat Occurrence in Successional Stages of Neotropical Dry Forests
Cited by: 20
Author(s): Luis Daniel Ávila-Cabadilla, Kathryn E. Stoner, Jafet M. Nassar, Mário M. Espírito-Santo, Mariana Yolotl Álvarez-Añorve, Carla I. Aranguren, Mickaël Henry, José A. González‐Carcacía, Luiz Alberto Dolabela Falcão, Arturo Sánchez‐Azofeifa
Software Mentions: 3
Published: almost 11 years ago

10.1371/journal.pone.0179273

Flight of the bumble bee: Buzzes predict pollination services
Cited by: 23
Author(s): Nicole E. Miller‐Struttmann, David R. Heise, Johannes Schul, Jennifer C. Geib, Candace Galen
Software Mentions: 3
Published: over 7 years ago

10.1371/journal.pone.0118201

A Combined Gene Signature of Hypoxia and Notch Pathway in Human Glioblastoma and Its Prognostic Relevance
Cited by: 45
Author(s): Khushboo Irshad, Saroj Kant Mohapatra, Chitrangda Srivastava, Harshit Garg, Seema Mishra, Bhawana Dikshit, Chitra Sarkar, Deepak Gupta, P. Sarat Chandra, Parthaprasad Chattopadhyay, Subrata Sinha, Kunzang Chosdol
Software Mentions: 3
Published: over 9 years ago

10.1371/journal.pone.0197824

Quantification of chemical and mechanical bioerosion rates of six Caribbean excavating sponge species found on the coral reefs of Curaçao
Cited by: 20
Author(s): Didier M. de Bakker, Alice E. Webb, Lisanne A. van den Bogaart, Steven M. A. C. van Heuven, H.W.G. Meesters, Fleur C. van Duyl
Software Mentions: 3
Published: over 6 years ago

10.1371/journal.pone.0208292

An exploratory study of factors associated with human brucellosis in mainland China based on time-series-cross-section data from 2005 to 2016
Cited by: 5
Author(s): Yun Lin, Mingqing Xu, Xingyu Zhang, Tao Zhang
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0185644

Characterization of HIV diversity, phylodynamics and drug resistance in Washington, DC
Cited by: 18
Author(s): Marcos Pérez‐Losada, Amanda D. Castel, Brittany Lee Lewis, Michael Kharfen, Charles P. Cartwright, Bruce Huang, Taylor J. Maxwell, Alan E. Greenberg, Keith A. Crandall
Software Mentions: 3
Published: about 7 years ago

10.1371/journal.pone.0011285

Characterization of Coastal Urban Watershed Bacterial Communities Leads to Alternative Community-Based Indicators
Cited by: 64
Author(s): Cindy H. Wu, Bram Sercu, Laurie C. Van De Werfhorst, Jakk Wong, Todd Z. DeSantis, Eoin L. Brodie, Terry C. Hazen, Patricia A. Holden, Gary L. Andersen
Software Mentions: 3
Published: over 14 years ago

10.1002/ece3.4434

Hybridization and postzygotic isolation promote reinforcement of male mating preferences in a diverse group of fishes with traditional sex roles
Cited by: 13
Author(s): Rachel L. Moran, Muchu Zhou, Julian M. Catchen, Rebecca C. Fuller
Software Mentions: 3
Published: over 6 years ago

10.1002/ece3.6997

In a comfort zone and beyond—Ecological plasticity of key marine mediators
Cited by: 13
Author(s): Emilia Trudnowska, Kaja Balazy, Joanna Stoń-Egiert, Irina Smolina, Thomas A. Brown, Marta Głuchowska
Software Mentions: 3
Published: about 4 years ago

10.1111/ele.12638

Weighting and indirect effects identify keystone species in food webs
Cited by: 52
Author(s): Lei Zhao, Huayong Zhang, Eoin J. O’Gorman, Tian Wu, Athen Ma, John C. Moore, Stuart R. Borrett, Guy Woodward
Software Mentions: 3
Published: over 8 years ago

10.3390/e21060596

A Maximum Entropy Procedure to Solve Likelihood Equations
Cited by: 2
Author(s): Antonio Calcagnì, Livio Finos, Gianmarco Altoè, Massimiliano Pastore
Software Mentions: 3
Published: over 5 years ago

10.1186/s12940-020-00653-3

Comparison of life loss per death attributable to ambient temperature among various development regions: a nationwide study in 364 locations in China
Cited by: 15
Author(s): Siqi Chen, Yize Xiao, Maigeng Zhou, Chunliang Zhou, Min Yu, Biao Huang, Yanjun Xu, Tao Liu, Jianxiong Hu, Xiaojun Xu, Lifeng Lin, Ruying Hu, Zhulin Hou, Junhua Li, Donghui Jin, Mingfang Qin, Qian Zhao, Weiwei Gong, Peng Yin, Yuliang Xu, Jianpeng Xiao, Weilin Zeng, Xing Li, Lingchuan Guo, Yonghui Zhang, Cunrui Huang
Software Mentions: 3
Published: about 4 years ago

10.1017/S204579601900026X

Subtyping psychological distress in the population: a semi-parametric network approach
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Author(s): Stijn de Vos, Scott B. Patten, Ernst Wit, Elisabeth H. Bos, Klaas J. Wardenaar, Peter de Jonge
Software Mentions: 3
Published: over 5 years ago

10.1186/s13072-019-0279-4

Human monocyte-to-macrophage differentiation involves highly localized gain and loss of DNA methylation at transcription factor binding sites
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Author(s): Koen F. Dekkers, Annette E. Neele, J. Wouter Jukema, Bastiaan T. Heijmans, Menno P.J. de Winther
Software Mentions: 3
Published: over 5 years ago

10.1007/s10654-018-0375-y

Estimation of causal effect measures with the R-package stdReg
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Author(s): Arvid Sjölander
Software Mentions: 3
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10.1111/eva.12138

Inferring influenza global transmission networks without complete phylogenetic information
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Author(s): Stéphane Aris‐Brosou
Software Mentions: 3
Published: almost 11 years ago

10.1111/eva.13290

Genomic region associated with run timing has similar haplotypes and phenotypic effects across three lineages of Chinook salmon
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Author(s): Stuart C. Willis, Jon E. Hess, Jeff Fryer, John Whiteaker, Shawn R. Narum
Software Mentions: 3
Published: about 3 years ago

10.1111/eva.12845

Adaptive limitations of white spruce populations to drought imply vulnerability to climate change in its western range
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Author(s): Zihaohan Sang, Jaime Sebastian‐Azcona, Andreas Hamann, Annette Menzel, Uwe G. Hacke
Software Mentions: 3
Published: over 5 years ago

10.1007/s10493-018-0314-3

Response of soil mites (Acari, Mesostigmata) to long-term Norway spruce plantation along a mountain stream
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Author(s): Jacek Kamczyc, Maciej Skorupski, Marcin K. Dyderski, Anna Gazda, Mariusz Hachułka, Paweł Horodecki, Izabela Kałucka, Marek Malicki, Remigiusz Pielech, Michał Smoczyk, Sylwia Wierzcholska, Andrzej M. Jagodziński
Software Mentions: 3
Published: about 6 years ago

10.12688/f1000research.22242.2

AlignmentViewer: Sequence Analysis of Large Protein Families
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Author(s): Roc Reguant, Yevgeniy Antipin, Rob Sheridan, Christian Dallago, Drew Diamantoukos, Augustin Luna, Chris Sander, Nicholas Paul Gauthier
Software Mentions: 3
Published: about 4 years ago

10.3389/fcimb.2021.585625

Unilateral Intervention in the Sinuses of Rabbits Induces Bilateral Inflammatory and Microbial Changes
Cited by: 0
Author(s): Christian A Lux, James Johnston, Sharon Waldvogel-Thurlow, Camila Dassi, Richard Douglas, Do‐Yeon Cho, Michael W. Taylor, Kristi Biswas
Software Mentions: 3
Published: about 3 years ago

10.3389/fcimb.2020.569685

Thriving Under Stress: Pseudomonas aeruginosa Outcompetes the Background Polymicrobial Community Under Treatment Conditions in a Novel Chronic Wound Model
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Author(s): Joann Phan, Saba Ranjbar, Miki Kagawa, Matthew Gargus, Allon I. Hochbaum, Katrine Whiteson
Software Mentions: 3
Published: about 4 years ago

10.3389/fpls.2018.01568

Genetic Variability Induced by Gamma Rays and Preliminary Results of Low-Cost TILLING on M2 Generation of Chickpea (Cicer arietinum L.)
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Author(s): Wahiba Amri-Tiliouine, Meriem Laouar, A. Abdelguerfi, Joanna Jankowicz-Cieślak, Ljupcho Jankuloski, Bradley J. Till
Software Mentions: 3
Published: about 6 years ago

10.3389/fpls.2019.01580

Disentangling the Environmental Factors That Shape Genetic and Phenotypic Leaf Trait Variation in the Tree Qualea grandiflora Across the Brazilian Savanna
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Author(s): Renata Santiago de Oliveira Buzatti, Thais Ribeiro Pfeilsticker, André Carneiro Muniz, Vincenzo A. Ellis, Renan P. Souza, José Pires de Lemos-Filho, Maria Bernadete Lovato
Software Mentions: 3
Published: almost 5 years ago

10.3389/fpsyg.2021.645788

Brief Interventions Influence the Quantity and Quality of Caregiver-Child Conversations in an Everyday Context
Cited by: 2
Author(s): Apoorva Shivaram, Yaritza Chavez, Erin M. Anderson, Autumn Fritz, Ryleigh Jackson, Louisa Edwards, Shelley Powers, Melissa E. Libertus, Susan J. Hespos
Software Mentions: 3
Published: over 3 years ago

10.3389/fpsyg.2020.575628

Teaching Analogical Reasoning With Co-speech Gesture Shows Children Where to Look, but Only Boosts Learning for Some
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Author(s): Katharine F. Guarino, Elizabeth M. Wakefield
Software Mentions: 3
Published: about 4 years ago

10.3389/fpsyg.2021.688356

Vocabulary Size Is a Key Factor in Predicting Second Language Lexical Encoding Accuracy
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Author(s): Danielle Daidone, Isabelle Darcy
Software Mentions: 3
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10.3389/fpsyg.2017.02283

A Framework to Assess Where and How Children Connect to Nature
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Software Mentions: 3
Published: almost 7 years ago

10.3389/fpsyg.2019.01646

Regression Analysis of ICT Impact Factors on Early Adolescents’ Reading Proficiency in Five High-Performing Countries
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Author(s): Yanyan Xiao, Yang Liu, Jie Hu
Software Mentions: 3
Published: over 5 years ago

10.3389/fpsyg.2016.01918

Will I Regret It? Anticipated Negative Emotions Modulate Choices in Moral Dilemmas
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Author(s): Carolina Pletti, Lorella Lotto, Alessandra Tasso, Michela Sarlo
Software Mentions: 3
Published: almost 8 years ago

10.3389/fpsyg.2016.00612

Relations between Spatial Distribution, Social Affiliations and Dominance Hierarchy in a Semi-Free Mandrill Population
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Author(s): Alexandre Naud, Eloise Chailleux, Yan Kestens, Céline Bret, Dominic Desjardins, Odile Petit, Barthélémy Ngoubangoye, Cédric Sueur
Software Mentions: 3
Published: over 8 years ago

10.3389/fvets.2021.714423

Magnetic Resonance Imaging Findings of the Proximal Metacarpal Region in Warmblood Horses: 36 Lame and 26 Control Limbs (2015–2021)
Cited by: 2
Author(s): Elisabeth van Veggel, Kurt Selberg, Brenda van der Velde-Hoogelander, Nick Bolas, Katrien Vanderperren, Hendrik Bergman
Software Mentions: 3
Published: over 3 years ago

10.3389/fvets.2020.572432

Peste des Petits Ruminants Risk Factors and Space-Time Clusters in Bangladesh
Cited by: 7
Author(s): Akm Anisur Rahman, SK Shaheenur Islam, Abu Jafar Mohammad Sufian, Hasanuzzaman Talukder, Michael P. Ward, Beatriz Martínez‐López
Software Mentions: 3
Published: almost 4 years ago

10.1534/g3.117.039693

asymptoticMK: A Web-Based Tool for the Asymptotic McDonald–Kreitman Test
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Software Mentions: 3
Published: over 7 years ago

10.1534/g3.118.200790

QTL Mapping on a Background of Variance Heterogeneity
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Software Mentions: 3
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10.3390/genes8100268

Low-Grade Dysplastic Nodules Revealed as the Tipping Point during Multistep Hepatocarcinogenesis by Dynamic Network Biomarkers
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Author(s): Lina Lu, Zhenfei Jiang, Yulin Dai, Luonan Chen
Software Mentions: 3
Published: about 7 years ago

10.3390/genes9050240

Whole Exome Sequencing Identifies New Host Genomic Susceptibility Factors in Empyema Caused by Streptococcus pneumoniae in Children: A Pilot Study
Cited by: 8
Author(s): Antonio Salas, Jacobo Pardo‐Seco, Ruth Barral-Arca, Miriam Cebey-López, Alberto Gómez‐Carballa, Irene Rivero‐Calle, Sara Pischedda, María José Currás-Tuala, Jorge Amigo, José Gómez-Rial, Federico Martinón‐Torres
Software Mentions: 3
Published: over 6 years ago

10.3390/genes9080407

Seasonal and Sexual Differences in the Microbiota of the Hoopoe Uropygial Secretion
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Author(s): Sonia M. Rodríguez‐Ruano, Manuel Martín‐Vivaldi, Juan Manuel Peralta‐Sánchez, Ana B. García-Martín, Ángela Martínez-García, Juan José Soler, Eva Valdivia, Manuel Martínez‐Bueno
Software Mentions: 3
Published: over 6 years ago

10.3390/genes11070806

Genetic Diversity of C4 Photosynthesis Pathway Genes in Sorghum bicolor (L.)
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Author(s): Yongfu Tao, Barbara George‐Jaeggli, Marie Bouteillé-Pallas, Shuaishuai Tai, Alan Cruickshank, David R. Jordan, Emma Mace
Software Mentions: 3
Published: over 4 years ago

10.1186/s13059-021-02270-w

simATAC: a single-cell ATAC-seq simulation framework
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Author(s): Zeinab Navidi, Lin Zhang, Bo Wang
Software Mentions: 3
Published: over 3 years ago

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