10.1093/molbev/msw004

Environmental Correlation Analysis for Genes Associated with Protection against Malaria
Cited by: 20
Author(s): Margaret J. Mackinnon, Carolyne Ndila, Sophie Uyoga, Alex Macharia, Robert W. Snow, Gavin Band, Anna Rautanen, Kirk A. Rockett, Dominic P. Kwiatkowski, Thomas N. Williams
Software Mentions: 4
Published: over 10 years ago

10.1093/molbev/msaa172

Gene Loss Predictably Drives Evolutionary Adaptation
Cited by: 49
Author(s): Jana Helsen, Karin Voordeckers, Laura Vanderwaeren, Toon Santermans, Maria Tsontaki, Kevin J. Verstrepen, Rob Jelier
Software Mentions: 4
Published: about 6 years ago

10.1186/s13229-019-0306-0

Cellular and molecular characterization of multiplex autism in human induced pluripotent stem cell-derived neurons
Cited by: 13
Author(s): Emily M.A. Lewis, Kesavan Meganathan, Dustin Baldridge, Paul Gontarz, Bo Zhang, Azad Bonni, John N. Constantino, Kristen L. Kroll
Software Mentions: 4
Published: almost 7 years ago

10.3390/microorganisms9020357

Soil Bacterial Diversity Is Positively Correlated with Decomposition Rates during Early Phases of Maize Litter Decomposition
Cited by: 18
Author(s): Akane Chiba, Yoshitaka Uchida, Susanne Kublik, Gisle Vestergaard, Franz Buegger, Michael Schloter, Stefanie Schulz
Software Mentions: 4
Published: over 5 years ago

10.3390/microorganisms8070987

Analysis of Tick Surface Decontamination Methods
Cited by: 13
Author(s): Angeline Hoffmann, Volker Fingerle, Matthias Noll
Software Mentions: 4
Published: about 6 years ago

10.1186/s12967-015-0466-4

Anoikis-resistant subpopulations of human osteosarcoma display significant chemoresistance and are sensitive to targeted epigenetic therapies predicted by expression profiling
Cited by: 24
Author(s): Jessica Foley, Donald J. Scholten, Noel R. Monks, David Cherba, David J. Monsma, Paula J. Davidson, Dawna Dylewski, Karl Dykema, Mary E. Winn, Matthew R. Steensma
Software Mentions: 4
Published: over 11 years ago

10.1038/s41598-017-03665-1

Integrated analysis and transcript abundance modelling of H3K4me3 and H3K27me3 in developing secondary xylem
Cited by: 20
Author(s): Steven G. Hussey, Mattheus Theodor Loots, Karen Van der Merwe, Eshchar Mizrachi, Alexander Andrew Myburg
Software Mentions: 4
Published: over 9 years ago

10.1186/s13073-017-0429-x

Activity of distinct growth factor receptor network components in breast tumors uncovers two biologically relevant subtypes
Cited by: 14
Author(s): Mumtahena Rahman, Shelley M. MacNeil, D. Graham Jenkins, Gajendra Shrestha, Sydney Rose Wyatt, Jasmine A. McQuerry, Stephen R. Piccolo, Laura M. Heiser, Joe W. Gray, W. Evan Johnson, Andrea Bild
Software Mentions: 4
Published: over 9 years ago

10.3390/microorganisms9040816

CaptureSeq: Hybridization-Based Enrichment of cpn60 Gene Fragments Reveals the Community Structures of Synthetic and Natural Microbial Ecosystems
Cited by: 8
Author(s): Matthew G. Links, Tim J. Dumonceaux, Erin McCarthy, Sean M. Hemmingsen, Edward Topp, Jennifer Town
Software Mentions: 4
Published: over 5 years ago

10.3390/microorganisms9020221

The Interplay between Campylobacter and the Caecal Microbial Community of Commercial Broiler Chickens over Time
Cited by: 9
Author(s): Ilaria Patuzzi, Massimiliano Orsini, Veronica Cibin, Sara Petrin, Eleonora Mastrorilli, Alessia Tiengo, Federica Gobbo, Salvatore Catania, Lisa Barco, Antonia Ricci, Carmen Losasso
Software Mentions: 4
Published: over 5 years ago

10.1186/s40168-019-0778-3

Warming-induced permafrost thaw exacerbates tundra soil carbon decomposition mediated by microbial community
Cited by: 66
Author(s): Jiajie Feng, Cong Wang, Jiesi Lei, Yunfeng Yang, Qingyun Yan, Xuelong Zhou, Xuanyu Tao, Daliang Ning, Mengting Yuan, Yujia Qin, Zhou Shi, Xue Guo, Zhili He, Joy D. Van Nostrand, Liyou Wu, Rosvel G. Bracho-Garillo, C. Ryan Penton, James R. Cole, Konstantinos T. Konstantinidis, Yiqi Luo, Edward A. G. Schuur, James M. Tiedje, Jizhong Zhou
Software Mentions: 4
Published: over 6 years ago

10.1186/s40168-021-01048-3

Validation and standardization of DNA extraction and library construction methods for metagenomics-based human fecal microbiome measurements
Cited by: 28
Author(s): Dieter M. Tourlousse, Koji Narita, Takamasa Miura, Mitsuo Sakamoto, Akiko Ohashi, Keita Shiina, Masami Matsuda, Daisuke Miura, Mamiko Shimamura, Yoshifumi Ohyama, Atsushi Yamazoe, Yuichi Uchino, Keishi Kameyama, Shingo Arioka, Jiro Kataoka, Takayoshi Hisada, Kazuyuki Fujii, Shunsuke Takahashi, Miho Kuroiwa, Masatomo Rokushima, Mitsue Nishiyama, Yoshiki Tanaka, Takuya Fuchikami, Hitomi Aoki, Satoshi Kira, Ryo Koyanagi, Takeshi Naito, Morie Nishiwaki, Hirotaka Kumagai, Mikiko Konda, Keiji Kasahara, Moriya Ohkuma, Hiroko Kawasaki, Yuji Sekiguchi, Jun Terauchi
Software Mentions: 4
Published: over 5 years ago

10.1371/journal.pone.0219980

Identification of pathological RA endotypes using blood-based biomarkers reflecting tissue metabolism. A retrospective and explorative analysis of two phase III RA studies
Cited by: 10
Author(s): Joseph Blair, Cecilie L. Bager, Adam Platt, Morten A. Karsdal, Anne‐Christine Bay‐Jensen
Software Mentions: 4
Published: about 7 years ago

10.3390/nu12030790

Human Milk Oligosaccharide Profile Variation Throughout Postpartum in Healthy Women in a Brazilian Cohort
Cited by: 39
Author(s): Ana Paula de Lima Ferreira, Ronaldo Alves, Amanda Faria de Figueiredo, Nadya Helena Alves-Santos, Nathalia Freitas-Costa, Mônica Araújo Batalha, Chloe Yonemitsu, Nadia Manivong, Annalee Fürst, Lars Bode, Gilberto Kac
Software Mentions: 4
Published: over 6 years ago

10.1186/s12859-019-2798-1

WASABI: a dynamic iterative framework for gene regulatory network inference
Cited by: 32
Author(s): Arnaud Bonnaffoux, Ulysse Herbach, Richard Angélique, Anissa Guillemin, Sandrine Gonin-Giraud, Pierre-Alexis Gros, Olivier Gandrillon
Software Mentions: 4
Published: over 7 years ago

10.1038/s41598-017-13091-y

Racial disparities in patient survival and tumor mutation burden, and the association between tumor mutation burden and cancer incidence rate
Cited by: 35
Author(s): Wensheng Zhang, Andrea Edwards, Erik K. Flemington, Kun Zhang
Software Mentions: 4
Published: almost 9 years ago

10.7717/peerj.6504

Effects of narrow linear clearings on movement and habitat use in a boreal forest mammal community during winter
Cited by: 3
Author(s): Colin A. Pattison, Carla Catterall
Software Mentions: 4
Published: over 7 years ago

10.1186/s13722-019-0152-6

Short screening tools for risky drinking in Aboriginal and Torres Strait Islander Australians: modified AUDIT-C and a new approach
Cited by: 13
Author(s): K. S. Kylie Lee, James H. Conigrave, Scott Wilson, Jimmy Perry, Sarah Callinan, Robin Room, Tanya Chikritzhs, Tim Slade, Noel Hayman, Geoffrey Leggat, Katherine M. Conigrave
Software Mentions: 4
Published: about 7 years ago

10.1007/s00248-021-01700-3

Soil microbial inoculation during flood events shapes headwater stream microbial communities and diversity
Cited by: 9
Author(s): Florian Caillon, Katharina Besemer, Peter Peduzzi, Jakob Schelker
Software Mentions: 4
Published: over 5 years ago

10.1093/aobpla/plaa006

Plasticity to drought and ecotypic differentiation in populations of a crop wild relative
Cited by: 20
Author(s): Silvia Matesanz, Marina Ramos‐Muñoz, Belén Moncalvillo, María Luisa Rubio Teso, S L García de Dionisio, José Antonio Vinagre Romero, J. M. Iriondo
Software Mentions: 4
Published: over 6 years ago

10.1111/1751-7915.12747

Electro-fermentation triggering population selection in mixed-culture glycerol fermentation
Cited by: 35
Author(s): Roman Moscoviz, Eric Trably, Nicolas Bernet
Software Mentions: 4
Published: about 9 years ago

10.1186/s12885-020-07331-0

LINC00649 underexpression is an adverse prognostic marker in acute myeloid leukemia
Cited by: 11
Author(s): Chao Guo, Ya-yue Gao, Qianqian Ju, Chunxia Zhang, Ming Gong, Zhenling Li
Software Mentions: 4
Published: about 6 years ago

10.7717/peerj.9364

Epifaunal invertebrate assemblages associated with branching Pocilloporids in Moorea, French Polynesia
Cited by: 7
Author(s): Chiara Pisapia, Jessica Stella, Nyssa J. Silbiger, Robert C. Carpenter
Software Mentions: 4
Published: about 6 years ago

10.1371/journal.pone.0212359

Rosellinia necatrix infection induces differential gene expression between tolerant and susceptible avocado rootstocks
Cited by: 16
Author(s): Adela Zumaquero, Elsa Martínez-Ferri, Antonio J. Matas, Bianca Reeksting, Nicholas Abraham Olivier, Fernando Pliego‐Alfaro, Araceli Barceló, Noëlani van den Berg, Clara Pliego
Software Mentions: 4
Published: over 7 years ago

10.1016/j.mex.2019.02.005

A new method for selecting sites for soil sampling, coupling global weighted principal component analysis and a cost-constrained conditioned Latin hypercube algorithm
Cited by: 4
Author(s): Kwabena Abrefa Nketia, Stephen Boahen Asabere, Stefan Erasmi, Daniela Sauer
Software Mentions: 4
Published: over 7 years ago

10.1038/s41598-018-20983-0

Trace metals from historical mining sites and past metallurgical activity remain bioavailable to wildlife today
Cited by: 41
Author(s): Estelle Camizuli, Renaud Scheifler, Stéphane Garnier, Fabrice Monna, R. Losno, Claude Gourault, Gilles Hamm, Caroline Lachiche, Guillaume Delivet, Carmela Château, Paul Alibert
Software Mentions: 4
Published: over 8 years ago

10.1038/s41598-018-23957-4

Differences in DNA Methylation and Functional Expression in Lactase Persistent and Non-persistent Individuals
Cited by: 28
Author(s): Milena Leseva, Richard J. Grand, Hagen Klett, Melanie Boerries, Hauke Busch, Alexandra M. Binder, Karin B. Michels
Software Mentions: 4
Published: over 8 years ago

10.1039/c9sc04090k

Is there a gender gap in chemical sciences scholarly communication?
Cited by: 34
Author(s): Aileen Day, Peter Corbett, J. Boyle
Software Mentions: 4
Published: over 6 years ago

10.1186/s13059-020-02007-1

Influenza infection elicits an expansion of gut population of endogenous Bifidobacterium animalis which protects mice against infection
Cited by: 62
Author(s): Qiang Zhang, Jin Hu, Jia-Wu Feng, Xiaoru Hu, Wang Ting, Wenxiao Gong, Kun Huang, Yi-Xiong Guo, Zhong Zou, Xian Lin, Run Zhou, Yuqi Yuan, Anding Zhang, Hong Wei, Gang Cao, Chen Liu, Lingling Chen, Meilin Jin
Software Mentions: 4
Published: over 6 years ago

10.3390/ijms22179566

Slow Off-Rate Modified Aptamer (SOMAmer) Proteomic Analysis of Patient-Derived Malignant Glioma Identifies Distinct Cellular Proteomes
Cited by: 6
Author(s): Thatchawan Thanasupawat, Aleksandra Głogowska, Chris D. Pascoe, S Krishnan, Maliha Tabassum Munir, Farhana Begum, Jason Beiko, Jerry Krcek, Marc R. Del Bigio, Marshall Pitz, Yaoqing Shen, Victor Spicer, Kevin M. Coombs, John Wilkins, Sabine Hombach‐Klonisch, Thomas Klonisch
Software Mentions: 4
Published: about 5 years ago

10.7717/peerj.10284

Trait differences among discrete morphs of a color polymorphic lizard,<i>Podarcis erhardii</i>
Cited by: 12
Author(s): Kinsey M. Brock, Simon Baeckens, Colin M. Donihue, José Martı́n, Panayiotis Pafilis, Danielle L. Edwards
Software Mentions: 4
Published: almost 6 years ago

10.1038/s41598-018-25698-w

Live-cell imaging of nuclear–chromosomal dynamics in bovine in vitro fertilised embryos
Cited by: 21
Author(s): Tatsuma Yao, Rie Suzuki, Natsuki Furuta, Yuka Suzuki, Kyoko Kabe, Mikiko Tokoro, Atsushi Sugawara, Akira Yajima, Tomohiro Nagasawa, S. Matoba, Kazuya Yamagata, Satoshi Sugimura
Software Mentions: 4
Published: over 8 years ago

10.1038/s41598-018-26125-w

Predicting transmission blocking potential of anti-malarial compounds in the Mosquito Feeding Assay using Plasmodium falciparum Male Gamete Inhibition Assay
Cited by: 22
Author(s): Gonzalo Colmenarejo, Sonia Lozano, Carolina González-Cortés, David Calvo, Juliana Sanchez-Garcia, Jesús-Luís Presa Matilla, Didier Leroy, Janneth Rodrigues
Software Mentions: 4
Published: over 8 years ago

10.1038/s41598-018-27340-1

Evidence of indiscriminate fishing effects in one of the world’s largest inland fisheries
Cited by: 79
Author(s): Peng Bun Ngor, Kevin S. McCann, Gaël Grenouillet, Nam So, Bailey C. McMeans, Evan D. G. Fraser, Sovan Lek
Software Mentions: 4
Published: over 8 years ago

10.1371/journal.pone.0140815

Somatic Variation of T-Cell Receptor Genes Strongly Associate with HLA Class Restriction
Cited by: 23
Author(s): Paul L. Klarenbeek, Marieke E. Doorenspleet, Rebecca E. E. Esveldt, Barbera D. C. van Schaik, Neubury M. Lardy, Antoine H. C. van Kampen, Paul P. Tak, Robert M. Plenge, Frank Baas, Paul I. W. de Bakker, Niek de Vries
Software Mentions: 4
Published: almost 11 years ago

10.1155/2017/5719461

Seasonal Variation in Vitamin D in Association with Age, Inflammatory Cytokines, Anthropometric Parameters, and Lifestyle Factors in Older Adults
Cited by: 39
Author(s): Leticia Elizondo‐Montemayor, Elena C. Castillo, Carlos E. Rodríguez López, José R Villarreal-Calderón, Merit Gómez-Carmona, Sofia Tenorio-Martínez, Bianca Nieblas, Gerardo García‐Rivas
Software Mentions: 4
Published: over 9 years ago

10.7717/peerj.6378

Density dependent attributes of fish aggregative behaviour
Cited by: 11
Author(s): Michaela Holubová, Martin Čech, Mojmír Vašek, Jiří Peterka
Software Mentions: 4
Published: over 7 years ago

10.1371/journal.pone.0164330

Response of Two Mytilids to a Heatwave: The Complex Interplay of Physiology, Behaviour and Ecological Interactions
Cited by: 32
Author(s): Celia Olabarria, Ignácio Gestoso, Fernando P. Lima, Elsa Vázquez, Luc A. Comeau, Filipe Veloso Gomes, Rui Seabra, José M. F. Babarro
Software Mentions: 4
Published: almost 10 years ago

10.3389/fpls.2015.00485

Context dependency and saturating effects of loss of rare soil microbes on plant productivity
Cited by: 52
Author(s): W. H. Gera Hol, Wietse de Boer, Mattias de Hollander, Eiko E. Kuramae, Annelein Meisner, Wim H. van der Putten
Software Mentions: 4
Published: about 11 years ago

10.1371/journal.pone.0209817

Human and farm influences on dairy cows´ responsiveness towards humans – a cross-sectional study
Cited by: 14
Author(s): Asja Ebinghaus, Silvia Ivemeyer, Ute Knierim
Software Mentions: 4
Published: over 7 years ago

10.1371/journal.pone.0157109

Category-Selectivity in Human Visual Cortex Follows Cortical Topology: A Grouped icEEG Study
Cited by: 39
Author(s): Cihan Kadipasaoglu, Christopher R. Conner, Meagan Lee Whaley, Vatche G. Baboyan, Nitin Tandon
Software Mentions: 4
Published: over 10 years ago

10.3389/fpls.2017.02025

Influence of Environmental Conditions and Genetic Background of Arabica Coffee (C. arabica L) on Leaf Rust (Hemileia vastatrix) Pathogenesis
Cited by: 45
Author(s): Lucile Toniutti, Jean‐Christophe Breitler, Hervé Etienne, Claudine Campa, Sylvie Doulbeau, Laurent Urban, Charles Lambot, Juan-Carlos Herrera Pinilla, Benoît Bertrand
Software Mentions: 4
Published: almost 9 years ago

10.3389/fpls.2018.01877

Hundred Fifty Years of Herbarium Collections Provide a Reliable Resource of Volatile Terpenoid Profiles Showing Strong Species Effect in Four Medicinal Species of Salvia Across the Mediterranean
Cited by: 13
Author(s): Isa Jafari Foutami, Trine Mariager, Riikka Rinnan, Christopher J. Barnes, Nina Rønsted
Software Mentions: 4
Published: over 7 years ago

10.1126/sciadv.abb4685

When ontogeny recapitulates phylogeny: Fixed neurodevelopmental sequence of manipulative skills among primates
Cited by: 16
Author(s): Sandra A. Heldstab, Karin Isler, Caroline Schuppli, Carel P. van Schaik
Software Mentions: 4
Published: about 6 years ago

10.2196/17270

Efficacy of the Ascure Smoking Cessation Program: Retrospective Study
Cited by: 11
Author(s): Ayaka Kato, Tomoyuki Tanigawa, Kohta Satake, Akihiro Nomura
Software Mentions: 4
Published: over 6 years ago

10.2196/28020

Integrating Behavior of Children with Profound Intellectual, Multiple, or Severe Motor Disabilities With Location and Environment Data Sensors for Independent Communication and Mobility: App Development and Pilot Testing
Cited by: 3
Author(s): Von Ralph Dane Marquez Herbuela, Tomonori Karita, Yoshiya Furukawa, Yoshinori Wada, Yagi Yoshihiro, Shuichiro Senba, Eiko Onishi, Tatsuo Saeki
Software Mentions: 4
Published: over 5 years ago

10.1007/s00213-017-4790-7

Effects of caffeine on reaction time are mediated by attentional rather than motor processes
Cited by: 12
Author(s): Christopher W. N. Saville, Helma M. de Morree, Neil M. Dundon, Samuele Maria Marcora, Christoph Klein
Software Mentions: 4
Published: over 8 years ago

10.1002/ece3.5709

Evolutionary history predicts high‐impact invasions by herbivorous insects
Cited by: 26
Author(s): Angela M. Mech, Kathryn A. Thomas, Travis D. Marsico, Daniel A. Herms, Craig R. Allen, Matthew P. Ayres, Kamal J. K. Gandhi, Jessica Gurevitch, Nathan P. Havill, Ruth A. Hufbauer, Andrew M. Liebhold, Kenneth F. Raffa, Ashley N. Schulz, Daniel R. Uden, Patrick C. Tobin
Software Mentions: 4
Published: almost 7 years ago

10.1371/journal.pone.0172579

The diversity and evolution of ecological and environmental citizen science
Cited by: 183
Author(s): Michael J. O. Pocock, John C. Tweddle, Joanna Savage, Lucy D. Robinson, Helen E. Roy
Software Mentions: 4
Published: over 9 years ago

10.1038/onc.2016.242

microRNAs with AAGUGC seed motif constitute an integral part of an oncogenic signaling network
Cited by: 16
Author(s): Yan Zhou, Oliver Frings, Rui M. Branca, Jorrit Boekel, Carlos le Sage, Erik Fredlund, Reuven Agami, Lukas M. Orre
Software Mentions: 4
Published: about 10 years ago

10.1093/jisesa/iez091

Floral Traits Predict Frequency of Defecation on Flowers by Foraging Bumble Bees
Cited by: 15
Author(s): Jonah M Bodden, Jenny Hazlehurst
Software Mentions: 4
Published: about 7 years ago

10.3390/jof7090769

Defining Functions of Mannoproteins in Saccharomyces cerevisiae by High-Dimensional Morphological Phenotyping
Cited by: 2
Author(s): Farzan Ghanegolmohammadi, Hiroki Okada, Yaxuan Liu, Kaori Itto-Nakama, Shinsuke Ohnuki, A. S. Savchenko, Erfei Bi, Satoshi Yoshida, Yoshikazu Ohya
Software Mentions: 4
Published: about 5 years ago

10.1371/journal.pone.0024062

Variation in Community Structure across Vertical Intertidal Stress Gradients: How Does It Compare with Horizontal Variation at Different Scales?
Cited by: 42
Author(s): Nelson Valdivia, Ricardo A. Scrosati, Markus Molis, Amanda S. Knox
Software Mentions: 4
Published: about 15 years ago

10.1371/journal.pone.0155252

Hendra Virus Infection Dynamics in the Grey-Headed Flying Fox (Pteropus poliocephalus) at the Southern-Most Extent of Its Range: Further Evidence This Species Does Not Readily Transmit the Virus to Horses
Cited by: 20
Author(s): Burroughs Al, Peter A. Durr, Victoria Boyd, Kerryne Graham, J. R. White, Shawn Todd, Jennifer Barr, Ina Smith, G Baverstock, J. Meers, Gary Crameri, Wang Lf
Software Mentions: 4
Published: over 10 years ago

10.1002/ece3.5204

Insights on the functional composition of specialist and generalist birds throughout continuous and fragmented forests
Cited by: 22
Author(s): Luiz dos Anjos, Gabriela Menezes Bochio, Hugo Reis Medeiros, Bia de Arruda Almeida, Barbara Rocha Arakaki Lindsey, Larissa Corsini Calsavara, Milton Cézar Ribeiro, José Marcelo Domingues Torezan
Software Mentions: 4
Published: over 7 years ago

10.1016/j.schres.2021.06.021

Self-harm, suicidal ideation, and the positive symptoms of psychosis: Cross-sectional and prospective data from a national household survey
Cited by: 5
Author(s): Angharad N de Cates, Gennaro Catone, Steven Marwaha, Paul Bebbington, Clara Humpston, Matthew R. Broome
Software Mentions: 4
Published: about 5 years ago

10.7554/eLife.60108

Novel cell types and developmental lineages revealed by single-cell RNA-seq analysis of the mouse crista ampullaris
Cited by: 21
Author(s): Brent A. Wilkerson, Heather L Zebroski, Connor Finkbeiner, Alex Chitsazan, Kathy Beach, Nilasha Sen, Renee C Zhang, Olivia Bermingham‐McDonogh
Software Mentions: 4
Published: over 5 years ago

10.4049/jimmunol.1900940

<i>Malat1</i> Suppresses Immunity to Infection through Promoting Expression of Maf and IL-10 in Th Cells
Cited by: 45
Author(s): James P. Hewitson, Katie A West, Kylie R. James, Gulab Fatima Rani, Nidhi Sharma Dey, Audrey Romano, Najmeeyah Brown, Sarah A. Teichmann, Paul M. Kaye, Dimitrios Lagos
Software Mentions: 4
Published: over 6 years ago

10.21203/rs.3.rs-916427/v1

Functional antibody and T-cell immunity following SARS-CoV-2 infection, including by variants of concern, in patients with cancer: the CAPTURE study
Cited by: 0
Author(s): Annika Fendler, Lewis Au, Scott T.C. Shepherd, Fiona Byrne, Maddalena Cerrone, Laura Amanda Boos, Karolina Rzeniewicz, William Gordon, Benjamin Shum, Camille L. Gérard, Barry Ward, Wenyi Xie, Andreas M. Schmitt, Nalinie Joharatnam‐Hogan, Georgina H. Cornish, Martin Pulé, Leila Mekkaoui, Kevin W. Ng, Eleanor Carlyle, Kim Edmonds, Lyra Del Rosario, Sarah Sarker, Karla Lingard, Mary Mangwende, Lucy Holt, Hamid Ahmod, Richard Stone, Camila Gomes, Helen Flynn, Ana Água-Doce, Philip Hobson, Simon Caidan, Michael Howell, Mary Wu, Robert Goldstone, Margaret Crawford, Laura Cubitt, Harshil Patel, Mike Gavrielides, Emma Nye, Ambrosius P. Snijders, James I. MacRae, Jérôme Nicod, Firza Alexander Gronthoud, Robyn Shea, Christina Messiou, David Cunningham, Ian Chau, Naureen Starling, Nicholas Turner, Liam Welsh, Nicholas van As, Robin L. Jones, Joanne Droney, Susana Banerjee, Kate Tatham, Shaman Jhanji, Mary O’Brien, Olivia Curtis, Kevin J. Harrington, Shreerang A. Bhide, Jessica Bazin, Anna Robinson, Clemency Stephenson, Tim Slattery, Yasir Khan, Zayd Tippu, Isla Leslie, Spyridon Gennatas, Alicia Okines, Alison Reid, Kate Young, Andrew J.S. Furness, Lisa Pickering, Sonia Gandhi, Steve Gamblin, Charles Swanton, Emma Nicholson, Sacheen Kumar, Nadia Yousaf, Katalin A. Wilkinson, Anthony J. Swerdlow, Ruth Harvey, George Kassiotis, James Larkin, Robert J. Wilkinson, Samra Turajlic
Software Mentions: 4
Published: almost 5 years ago

10.1098/rsos.202145

The limits of convergence: the roles of phylogeny and dietary ecology in shaping non-avian amniote crania
Cited by: 5
Author(s): Keegan M. Melstrom, Kenneth D. Angielczyk, Kathleen A. Ritterbush, Randall B. Irmis
Software Mentions: 4
Published: about 5 years ago

10.1371/journal.pone.0179886

Morphological and genetic diversity of camu-camu [Myrciaria dubia (Kunth) McVaugh] in the Peruvian Amazon
Cited by: 10
Author(s): Jan Šmíd, Marie Kalousová, Bohumil Mandák, Jakub Houška, Anna Chládová, Mario Pinedo, Bohdan Lojka
Software Mentions: 4
Published: about 9 years ago

10.1371/journal.pone.0243595

Extreme value theory as a framework for understanding mutation frequency distribution in cancer genomes
Cited by: 2
Author(s): Natsuki Tokutomi, Kenta Nakai, Sumio Sugano
Software Mentions: 4
Published: about 5 years ago

10.1186/s41512-021-00096-5

Adaptive sample size determination for the development of clinical prediction models
Cited by: 7
Author(s): Evangelia Christodoulou, Maarten van Smeden, Michael Edlinger, Dirk Timmerman, Maria Wanitschek, Ewout W. Steyerberg, Ben Van Calster
Software Mentions: 4
Published: over 5 years ago

10.1037/pag0000324

Theory of mind and psychosocial characteristics in older men.
Cited by: 15
Author(s): Marcin A. Radecki, Simon R. Cox, Sarah E. MacPherson
Software Mentions: 4
Published: over 7 years ago

10.1098/rsos.201717

Fertility and mortality impacts of thermal stress from experimental heatwaves on different life stages and their recovery in a model insect
Cited by: 43
Author(s): Kris Sales, Ramakrishnan Vasudeva, Matthew J. G. Gage
Software Mentions: 4
Published: over 5 years ago

10.7554/eLife.66186

Host-associated microbe PCR (hamPCR) enables convenient measurement of both microbial load and community composition
Cited by: 19
Author(s): Derek S. Lundberg, Pratchaya Pramoj Na Ayutthaya, Annett Strauß, Gautam Shirsekar, Wen‐Sui Lo, Thomas Lahaye, Detlef Weigel
Software Mentions: 4
Published: about 5 years ago

10.7554/eLife.58999

Does diversity beget diversity in microbiomes?
Cited by: 28
Author(s): Naïma Madi, Michiel Vos, Carmen Lía Murall, Pierre Legendre, B. Jesse Shapiro
Software Mentions: 4
Published: almost 6 years ago

10.7554/eLife.65948

Nutrient dominance governs the assembly of microbial communities in mixed nutrient environments
Cited by: 42
Author(s): Sylvie Estrela, Alicia Sánchez-Gorostiaga, Jean C. C. Vila, Álvaro Sánchez
Software Mentions: 4
Published: over 5 years ago

10.1002/ece3.6413

Gut microbiomes of sympatric Amazonian wood‐eating catfishes (Loricariidae) reflect host identity and little role in wood digestion
Cited by: 12
Author(s): Mark McCauley, Donovan P. German, Nathan K. Lujan, Colin R. Jackson
Software Mentions: 4
Published: over 6 years ago

10.1002/ece3.6952

Different landscape effects on the genetic structure of two broadly distributed woody legumes,<i>Acacia salicina</i>and<i>A. stenophylla</i>(Fabaceae)
Cited by: 2
Author(s): Francisco Encinas‐Viso, Christiana McDonald‐Spicer, Nunzio Knerr, Peter H. Thrall, Linda Broadhurst
Software Mentions: 4
Published: almost 6 years ago

10.1002/pmic.201500264

Micro‐proteomics with iterative data analysis: Proteome analysis in <i>C. elegans</i> at the single worm level
Cited by: 28
Author(s): Dalila Bensaddek, Vikram Narayan, Armel Nicolas, Alejandro Brenes Murillo, Anton Gartner, Cynthia Kenyon
Software Mentions: 4
Published: over 10 years ago

10.1371/journal.pone.0215446

Influence of starvation on walking behavior of Bagrada hilaris (Hemiptera: Pentatomidae)
Cited by: 14
Author(s): Ian M. Grettenberger, Shimat V. Joseph
Software Mentions: 4
Published: over 7 years ago

10.1002/ece3.5877

Assessing the exposure of forest habitat types to projected climate change—Implications for Bavarian protected areas
Cited by: 4
Author(s): Claudia Steinacker, Carl Beierkuhnlein, Anja Jaeschke
Software Mentions: 4
Published: almost 7 years ago

10.3390/ijms20194665

Unravelling the Metabolic and Hormonal Machinery During Key Steps of Somatic Embryogenesis: A Case Study in Coffee
Cited by: 15
Author(s): Rayan Awada, Claudine Campa, Estelle Gibault, Eveline Déchamp, Frédéric Georget, Maud Lepelley, Cécile Abdallah, Alexender Erban, Federico Martinez‐Seidel, Joachim Kopka, Laurent Legendre, Sophie Léran, Geneviève Conéjéro, Jean‐Luc Verdeil, Dominique Crouzillat, D. Breton, Benoît Bertrand, Hervé Etienne
Software Mentions: 4
Published: almost 7 years ago

10.3389/fmicb.2021.657954

Evaluation of Metagenomic-Enabled Antibiotic Resistance Surveillance at a Conventional Wastewater Treatment Plant
Cited by: 38
Author(s): Haniyyah Majeed, Maria V. Riquelme, Benjamin C. Davis, Suraj Gupta, Luisa Gillian Angeles, Diana S. Aga, Emily Garner, Amy Pruden, Peter J. Vikesland
Software Mentions: 4
Published: over 5 years ago

10.1002/ece3.6001

RAPTURE (RAD capture) panel facilitates analyses characterizing sea lamprey reproductive ecology and movement dynamics
Cited by: 27
Author(s): Nicholas M. Sard, Seth Smith, Jared J. Homola, Jeannette Kanefsky, Gale A. Bravener, Jean V. Adams, Christopher M. Holbrook, Peter J. Hrodey, Kevin Tallon, Kim T. Scribner
Software Mentions: 4
Published: over 6 years ago

10.3390/ijerph15102144

Neighborhood Violence Impacts Disease Control and Surveillance: Case Study of Cali, Colombia from 2014 to 2016
Cited by: 6
Author(s): Amy R. Krystosik, Andrew Curtis, A. Desirée LaBeaud, Diana Dávalos, Robinson Pacheco, Paola Buritica, Álvaro Álvarez, Madhav P. Bhatta, Jorge Humberto Rojas Palacios, Mark A. James
Software Mentions: 4
Published: almost 8 years ago

10.1002/ece3.6962

Filter feeding, deviations from bilateral symmetry, developmental noise, and heterochrony of hemichordate and cephalochordate gills
Cited by: 6
Author(s): Charles Larouche‐Bilodeau, Xavier Guilbeault‐Mayers, Christopher B. Cameron
Software Mentions: 4
Published: almost 6 years ago

10.1002/ece3.7320

Deciphering the diet of a wandering spider ( <i>Phoneutria boliviensis</i> ; Araneae: Ctenidae) by DNA metabarcoding of gut contents
Cited by: 5
Author(s): Diego Sierra Ramírez, Giovany Guevara, Lida Marcela Franco Pérez, Arie van der Meijden, Julio César González‐Gómez, Juan Carlos Valenzuela‐Rojas, Carlos Fernando Prada Quiroga
Software Mentions: 4
Published: over 5 years ago

10.3390/ijms20030736

An Altered Circadian Clock Coupled with a Higher Photosynthesis Efficiency Could Explain the Better Agronomic Performance of a New Coffee Clone When Compared with a Standard Variety
Cited by: 11
Author(s): Lucile Toniutti, Jean‐Christophe Breitler, Charlie Guittin, Sylvie Doulbeau, Hervé Etienne, Claudine Campa, Charles Lambot, Juan-Carlos Herrera Pinilla, Benoît Bertrand
Software Mentions: 4
Published: over 7 years ago

10.1038/srep45840

Microbial Biogeography and Core Microbiota of the Rat Digestive Tract
Cited by: 105
Author(s): Dongyao Li, Haiqin Chen, Bingyong Mao, Qin Yang, Jianxin Zhao, Zhennan Gu, Hao Zhang, Yong Q. Chen, Wei Chen
Software Mentions: 4
Published: over 9 years ago

10.1002/ece3.1192

Parasitism in early life: environmental conditions shape within-brood variation in responses to infection
Cited by: 17
Author(s): Hanna Granroth‐Wilding, Sarah J. Burthe, Sue Lewis, Thomas E. Reed, Katherine A. Herborn, Mark A. Newell, Emi Takahashi, Francis Daunt, Emma J. A. Cunningham
Software Mentions: 4
Published: about 12 years ago

10.1038/srep43315

An inflammatory gene signature distinguishes neurofibroma Schwann cells and macrophages from cells in the normal peripheral nervous system
Cited by: 35
Author(s): Kwangmin Choi, Kakajan Komurov, Jonathan S. Fletcher, Edwin Jousma, José A. Cancelas, Jianqiang Wu, Nancy Ratner
Software Mentions: 4
Published: over 9 years ago

10.1371/journal.pone.0149220

The Effects of Sub-Regional Climate Velocity on the Distribution and Spatial Extent of Marine Species Assemblages
Cited by: 97
Author(s): Kristin M. Kleisner, Michael J. Fogarty, Sally McGee, Analie Barnett, Paula S. Fratantoni, Jennifer K. Greene, Jonathan A. Hare, Sean M. Lucey, Christopher McGuire, Jay Odell, Vincent S. Saba, Lesley Smith, Kristen R. Weaver, Malin L. Pinsky
Software Mentions: 4
Published: over 10 years ago

10.1002/ece3.3671

The Groot Effect: Plant facilitation and desert shrub regrowth following extensive damage
Cited by: 21
Author(s): Christopher J. Lortie, Éva Gruber, Alessandro Filazzola, Taylor Noble, Michael F. Westphal
Software Mentions: 4
Published: almost 9 years ago

10.3389/fneur.2020.575953

Cerebrovascular Senescence Is Associated With Tau Pathology in Alzheimer's Disease
Cited by: 39
Author(s): Annie Bryant, Miwei Hu, Becky C. Carlyle, Steven E. Arnold, Matthew P. Frosch, Sudeshna Das, Bradley T. Hyman, Rachel E. Bennett
Software Mentions: 4
Published: about 6 years ago

10.1371/journal.ppat.1009461

Deconvolution of intergenic polymorphisms determining high expression of Factor H binding protein in meningococcus and their association with invasive disease
Cited by: 4
Author(s): Marco Spinsanti, Tarcisio Brignoli, Margherita Bodini, Lucia Eleonora Fontana, Matteo De Chiara, Alessia Biolchi, Alessandro Muzzi, Vincenzo Scarlato, Isabel Delany
Software Mentions: 4
Published: over 5 years ago

10.3389/fneur.2020.00605

Subtle Cerebellar Features in Relatives of Essential Tremor Cases
Cited by: 1
Author(s): Evan A. Hale, Ruby Hickman, Hollie Dowd, Deepti Varathan, Gina Liu, Elan D. Louis
Software Mentions: 4
Published: about 6 years ago

10.1098/rsos.181770

Ecosystem services and ecological degradation of communal wetlands in a South African biodiversity hotspot
Cited by: 10
Author(s): A Owethu Pantshwa, Falko T. Buschke
Software Mentions: 4
Published: over 7 years ago

10.1371/journal.pone.0212577

Developmental fluoxetine exposure in zebrafish reduces offspring basal cortisol concentration via life stage-dependent maternal transmission
Cited by: 15
Author(s): Rubén Martínez, Marilyn N. Vera-Chang, Majd Haddad, J.B.A. van Zon, Laia Navarro‐Martín, Vance L. Trudeau, Jan A. Mennigen
Software Mentions: 4
Published: over 7 years ago

10.1002/ece3.4029

Changes in intestinal microbiota across an altitudinal gradient in the lizard <i>Phrynocephalus vlangalii</i>
Cited by: 44
Author(s): Wenya Zhang, Na Li, Xiaolong Tang, Naifa Liu, Zhao Wang
Software Mentions: 4
Published: over 8 years ago

10.1186/1476-072X-11-39

Modelling zoonotic diseases in humans: comparison of methods for hantavirus in Sweden
Cited by: 30
Author(s): Caroline Zeimes, Gert E. Olsson, Clas Ahlm, Sophie Vanwambeke
Software Mentions: 4
Published: over 14 years ago

10.1098/rspb.2020.2244

Koala methylomes reveal divergent and conserved DNA methylation signatures of X chromosome regulation
Cited by: 3
Author(s): Devika Singh, Dan Sun, Andrew King, David E. Alquezar‐Planas, Rebecca N. Johnson, David Alvarez‐Ponce, Soojin V. Yi
Software Mentions: 4
Published: over 5 years ago

10.1093/jxb/eraa003

DNA methylation is involved in the regulation of pepper fruit ripening and interacts with phytohormones
Cited by: 38
Author(s): Kai Xiao, Jie Chen, Qixiumei He, Yixin Wang, Huolin Shen, Liang Sun
Software Mentions: 4
Published: over 6 years ago

10.1093/jxb/erx405

Novel computed tomography-based tools reliably quantify plant reproductive investment
Cited by: 34
Author(s): Yannick M. Staedler, Thomas Kreisberger, Sara Manafzadeh, Marion Chartier, Stephan Handschuh, Susanne Pamperl, Susanne Sontag, Ovidiu Paun, Jürg Schönenberger
Software Mentions: 4
Published: over 8 years ago

10.3389/fmicb.2018.02043

Protists Within Corals: The Hidden Diversity
Cited by: 23
Author(s): Camille Clérissi, Sébastien Brunet, Jérémie Vidal-Dupiol, Mehdi Adjeroud, Pierre Lepage, Laure Guillou, Jean-Michel Escoubas, Ève Toulza
Software Mentions: 4
Published: about 8 years ago

10.1002/ece3.1823

Modeling and predicting the growth of the mussel, <i>Mytilus edulis</i> : implications for planning of aquaculture and eutrophication mitigation
Cited by: 18
Author(s): Per Bergström, Susanne Lindegarth, Mats Lindegarth
Software Mentions: 4
Published: almost 11 years ago

10.1016/j.ebiom.2018.10.051

Epigenetic signatures of starting and stopping smoking
Cited by: 62
Author(s): Daniel L. McCartney, Anna J. Stevenson, Robert F. Hillary, Richard M Martin, Mairead Lesley Bermingham, Stewart W. Morris, Toni‐Kim Clarke, Archie Campbell, Alison Murray, Heather C. Whalley, David J. Porteous, Peter M. Visscher, Andrew M. McIntosh, Kathryn Evans, Ian J. Deary, Riccardo E. Marioni
Software Mentions: 4
Published: almost 8 years ago

10.1371/journal.pone.0235741

Changes in infant non-nutritive sucking throughout a suck sample at 3-months of age
Cited by: 6
Author(s): Emily Zimmerman, Thomas Carpenito, Alaina Martens
Software Mentions: 4
Published: about 6 years ago

10.3389/fnins.2018.01039

Pupillometry of Groove: Evidence for Noradrenergic Arousal in the Link Between Music and Movement
Cited by: 13
Author(s): Daniel L. Bowling, Pablo Graf Ancochea, Michael J. Hove, W. Tecumseh Fitch
Software Mentions: 4
Published: over 7 years ago