Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: pypi: ssbio

https://packages.ecosyste.ms/registries/pypi.org/packages/ssbio

Tools to enable structural systems biology
20 versions
Latest release: almost 6 years ago
206 downloads last month

Papers Mentioning ssbio 4

A computational knowledge-base elucidates the response of Staphylococcus aureus to different media types
Cited by: 35
Author(s): Yara Seif, Jonathan M. Monk, Nathan Mih, Hannah Tsunemoto, Saugat Poudel, Cristal Zuñiga, Jared T. Broddrick, Karsten Zengler, Jaehyung Kim
Software Mentions: 7
Published: almost 6 years ago

10.1186/s12859-020-3505-y

Adaptations of Escherichia coli strains to oxidative stress are reflected in properties of their structural proteomes
Cited by: 3
Author(s): Nathan Mih, Jonathan M. Monk, Xin Fang, Edward Catoiu, David Heckmann, Laurence T. Yang, Jaehyung Kim
Software Mentions: 2
Published: over 4 years ago

10.3390/microorganisms8122050

The Expanding Computational Toolbox for Engineering Microbial Phenotypes at the Genome Scale
Cited by: 11
Author(s): Daniel C. Zielinski, Arjun Patel, Bernhard Ø. Palsson
Software Mentions: 2
Published: about 4 years ago

10.15252/msb.202010099

Genome‐scale metabolic modeling reveals key features of a minimal gene set
Cited by: 12
Author(s): Jean-Christophe Lachance, Dominick Matteau, Joëlle Brodeur, Colton J. Lloyd, Nathan Mih, Zachary A. King, Thomas F. Knight, Adam M. Feist, Jonathan M. Monk, Jaehyung Kim, Pierre-Étienne Jacques, Sébastien Rodrigue
Software Mentions: 2
Published: over 3 years ago