Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: pypi: snp
https://packages.ecosyste.ms/registries/pypi.org/packages/snp
freeze inputs and outputs to functions for refactoring
1 version
Latest release: about 6 years ago
17 downloads last month
Papers Mentioning snp 10
10.1111/mec.15648
Genomic signatures of convergent adaptation to Alpine environments in three Brassicaceae speciesCited by: 11
Author(s): Christian Rellstab, Stefan Zoller, Christian Sailer, Andrew Tedder, Félix Gugerli, Kentaro Shimizu, Rolf Holderegger, Alex Widmer, Martin C. Fischer
Software Mentions: 9
Published: about 4 years ago
10.1186/s13015-019-0137-8
SNPs detection by eBWT positional clusteringCited by: 24
Author(s): Nicola Prezza, Nadia Pisanti, Marinella Sciortino, Giovanna Rosone
Software Mentions: 5
Published: almost 6 years ago
10.1186/1471-2105-14-326
snp-search: simple processing, manipulation and searching of SNPs from high-throughput sequencingCited by: 6
Author(s): Ali Al‐Shahib, Anthony Underwood
Software Mentions: 4
Published: about 11 years ago
10.1111/pbi.13351
The high‐quality genome of diploid strawberry (<i>Fragaria nilgerrensis</i>) provides new insights into anthocyanin accumulationCited by: 45
Author(s): Junxiang Zhang, Yingying Lei, Bao-Tian Wang, Li Song, Shuang Yu, Yan Wang, Li He, Yuexue Liu, Yue Ma, Dai Hirata, Jiahong Wang, Zhihong Zhang
Software Mentions: 4
Published: almost 5 years ago
10.1371/journal.pntd.0008235
Persistence of Brucella abortus lineages revealed by genomic characterization and phylodynamic analysisCited by: 11
Author(s): Marcela Suárez-Esquivel, Gabriela Hernández-Mora, Nazareth Ruíz-Villalobos, Elías Barquero-Calvo, Carlos Chacón-Díaz, Jason T. Ladner, Gerardo Oviedo-Sánchez, Jeffrey T. Foster, Norman Rojas‐Campos, Esteban Chaves-Olarte, Nicholas R. Thomson, Edgardo Moreno, Caterina Guzmán-Verri
Software Mentions: 4
Published: over 4 years ago
10.1186/1471-2105-12-75
AnyExpress: Integrated toolkit for analysis of cross-platform gene expression data using a fast interval matching algorithmCited by: 16
Author(s): Jihoon Kim, Kiltesh Patel, Hyunchul Jung, Winston Patrick Kuo, Lucila Ohno-Machado
Software Mentions: 4
Published: almost 14 years ago
10.1111/eva.13203
Parentage‐based tagging combined with genetic stock identification is a cost‐effective and viable replacement for coded‐wire tagging in large‐scale assessments of marine Chinook salmon fisheries in British Columbia, CanadaCited by: 10
Author(s): Terry D. Beacham, Colin G. Wallace, Kim Jonsen, Brenda McIntosh, John R. Candy, K. Ter Horst, Cheryl P. Lynch, D. M. Willis, Wilf Luedke, Lee Kearey, Eric B. Rondeau
Software Mentions: 3
Published: almost 4 years ago
10.1186/2047-217X-2-17
Galaxy tools to study genome diversityCited by: 19
Author(s): Oscar C. Bedoya-Reina, Aakrosh Ratan, Richard Burhans, Hie Lim Kim, Belinda Giardine, Cathy Riemer, Qunhua Li, Thomas L. Olson, Thomas P. Loughran, Bridgett M. vonHoldt, George H. Perry, Stephan C. Schuster, Webb Miller
Software Mentions: 2
Published: about 11 years ago
10.1371/journal.pone.0090485
Comparison of Illumina and 454 Deep Sequencing in Participants Failing Raltegravir-Based Antiretroviral TherapyCited by: 30
Author(s): Jonathan Z. Li, Brad Chapman, Patrick Charlebois, Oliver Hofmann, Brian Weiner, Alyssa Jocson Porter, Reshmi Samuel, Saran Vardhanabhuti, Zheng Li, Joseph J. Eron, Babafemi Taiwo, Michael C. Zody, Matthew R. Henn, Daniel R. Kuritzkes, Winston Hide
Software Mentions: 1
Published: almost 11 years ago
10.1093/gbe/evab088
A Transcriptomic Pipeline Adapted for Genomic Sequence Discovery of Germline-Restricted Sequence in Zebra Finch,<i>Taeniopygia guttata</i>Cited by: 8
Author(s): Kathryn C. Asalone, Ajuni K Takkar, Colin J. Saldanha, John R. Bracht
Software Mentions: 1
Published: over 3 years ago