Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: pypi: snap

https://packages.ecosyste.ms/registries/pypi.org/packages/snap

snap - zope 3 frontend for entransit
1 version
Latest release: almost 18 years ago
1,918 downloads last month

Papers Mentioning snap 11

Chromosome‐scale assembly of the genome of Salixdunnii reveals a male‐heterogametic sex determination system on chromosome 7
Cited by: 24
Author(s): Li He, Kai‐Hua Jia, Rengang Zhang, Yuan Wang, Tian-Le Shi, Zhichao Li, Si-Wen Zeng, Xin-Jie Cai, Natascha D. Wagner, Elvira Hörandl, Aline Muyle, Ke Yang, Deborah Charlesworth, Jian‐Feng Mao
Software Mentions: 9
Published: over 3 years ago

10.1038/s42003-020-01637-2

Horseshoe crab genomes reveal the evolution of genes and microRNAs after three rounds of whole genome duplication
Cited by: 23
Author(s): Wenyan Nong, Zhe Qu, Yiqian Li, Tom Barton-Owen, Hon Kit Wong, Ho Yin Yip, Hoi Ting Lee, Satya Narayana, Tobias Baril, Thomas Swale, Jianquan Cao, Ting‐Fung Chan, Hoi Shan Kwan, Sai Ming Ngai, Gianni Panagiotou, Pei‐Yuan Qian, Jian Qiu, Kevin Yuk‐Lap Yip, Normaz Wana Ismail, Siddhartha Pati, Akbar John, Stephen S. Tobe, William G. Bendena, Siu Gin Cheung, Alexander Hayward, Jerome H.L. Hui
Software Mentions: 8
Published: almost 4 years ago

10.1111/1755-0998.13187

A de novo chromosome‐level genome assembly ofCoregonussp. “Balchen”: One representative of the Swiss Alpine whitefish radiation
Cited by: 25
Author(s): Rishi De‐Kayne, Stefan Zoller, Philine G. D. Feulner
Software Mentions: 8
Published: over 4 years ago

10.1099/mgen.0.000445

Transcriptome-wide expression profiling of Sporothrix schenckii yeast and mycelial forms and the establishment of the Sporothrix Genome DataBase
Cited by: 12
Author(s): Domenico Giosa, Maria Rosa Felice, Letterio Giuffrè, Riccardo Aiese Cigliano, Andreu Paytuví-Gallart, Carla Lo Passo, Cinzia Barresi, Enrico D’Alessandro, Huaiqiu Huang, Giuseppe Criseo, Héctor M. Mora-Montes, Sybren de Hoog, Orazio Romeo
Software Mentions: 7
Published: about 4 years ago

10.1111/1755-0998.13252

Identifying the causes and consequences of assembly gaps using a multiplatform genome assembly of a bird‐of‐paradise
Cited by: 84
Author(s): Valentina Peona, Mozes P. K. Blom, Luohao Xu, Reto Burri, Shawn Sullivan, Ignas Bunikis, Ivan Liachko, Tri Haryoko, Knud A. Jønsson, Qi Zhou, Martin Irestedt, Alexander Suh
Software Mentions: 6
Published: about 4 years ago

10.1186/s13068-021-01975-1

Genomic and transcriptomic analysis of the thermophilic lignocellulose-degrading fungus Thielavia terrestris LPH172
Cited by: 14
Author(s): Monika Tõlgo, Silvia Hüttner, Peter Rugbjerg, Nguyễn Thanh Thủy, Vu Nguyen Thanh, Johan Larsbrink, Lisbeth Olsson
Software Mentions: 5
Published: over 3 years ago

10.1371/journal.pgen.1007016

Genomics of parallel adaptation at two timescales in Drosophila
Cited by: 20
Author(s): Li Zhao, David J. Begun
Software Mentions: 5
Published: about 7 years ago

10.1099/mgen.0.000103

Large scale genomic analysis shows no evidence for pathogen adaptation between the blood and cerebrospinal fluid niches during bacterial meningitis
Cited by: 33
Author(s): John A. Lees, Philip H. C. Kremer, Ana Sousa Manso, Nicholas J. Croucher, Bart Ferwerda, Mercedes Valls Serón, Marco R. Oggioni, Julian Parkhill, Matthijs C. Brouwer, Arie van der Ende, Diederik van de Beek, Stephen D. Bentley
Software Mentions: 4
Published: almost 8 years ago

10.1186/s12864-016-2928-3

The genome of the emerging barley pathogen Ramularia collo-cygni
Cited by: 29
Author(s): Graham R. D. McGrann, Ambrose Andongabo, Elisabet Sjökvist, Urmi Trivedi, Francois Dussart, Maciej Kaczmarek, Ashleigh Mackenzie, J. M. Fountaine, Jeanette Taylor, Lindsay Paterson, K. Gorniak, F. J. Burnett, K. Kanyuka, K. E. Hammond‐Kosack, J. J. Rudd, Mark Blaxter, Neil D. Havis
Software Mentions: 4
Published: over 8 years ago

10.1186/s12864-020-6707-9

A benchmark study of ab initio gene prediction methods in diverse eukaryotic organisms
Cited by: 39
Author(s): Nicolas Scalzitti, Anne Jeannin-Girardon, Pierre Collet, Olivier Poch, Julie Thompson
Software Mentions: 3
Published: over 4 years ago

10.1111/ppa.12789

Cassava brown streak disease in Rwanda, the associated viruses and disease phenotypes
Cited by: 21
Author(s): Esperance Munganyinka, Elijah Ateka, A W Kihurani, M.C. Kanyange, Fred Tairo, Peter Sseruwagi, Joseph Ndunguru
Software Mentions: 3
Published: about 7 years ago