Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: pypi: simpleM
https://packages.ecosyste.ms/registries/pypi.org/packages/simpleM
My first Python package
20 versions
Latest release: about 3 years ago
21 downloads last month
Papers Mentioning simpleM 26
10.3389/fgene.2019.00888
Genome-Wide Homozygosity Mapping Reveals Genes Associated With Cognitive Ability in Children From Saudi ArabiaCited by: 5
Author(s): Sergey A. Kornilov, Mei Tan, Abdullah Aljughaiman, O. Yu. Naumova, Elena L. Grigorenko
Software Mentions: 5
Published: about 5 years ago
10.1186/s40168-021-01040-x
Joint contributions of the gut microbiota and host genetics to feed efficiency in chickensCited by: 49
Author(s): Chaoliang Wen, Wei Yan, Chunning Mai, Zhongyi Duan, Jiangxia Zheng, Chang Sun, Ning Yang
Software Mentions: 5
Published: over 3 years ago
10.7717/peerj.11707
Genome-wide association study uncovers new genetic loci and candidate genes underlying seed chilling-germination in maizeCited by: 17
Author(s): Yinchao Zhang, Peng Liu, Chen Wang, Na Zhang, Yuxiao Zhu, Chaoying Zou, Guangsheng Yuan, Cong Yang, Shibin Gao, Guangtang Pan, Langlang Ma, Yaou Shen
Software Mentions: 5
Published: over 3 years ago
10.1186/s12864-015-1945-y
Genome-wide association study dissects genetic architecture underlying longitudinal egg weights in chickensCited by: 34
Author(s): Guoqiang Yi, Manman Shen, Jiahui Yuan, Chang Sun, Zhongyi Duan, Liang Qu, Taocun Dou, Meng Ma, Jian Lü, Jun Guo, Sirui Chen, Lujiang Qu, Kehua Wang, Ning Yang
Software Mentions: 5
Published: about 9 years ago
10.1371/journal.pgen.1008197
Novel protective and risk loci in hip dysplasia in German ShepherdsCited by: 8
Author(s): Lea Mikkola, Saila Holopainen, Anu K. Lappalainen, Tiina Pessa‐Morikawa, Thomas Pulikotial Augustine, Meharji Arumilli, Marjo K. Hytönen, Osmo Hakosalo, Hannes Lohi, Antti Iivanainen
Software Mentions: 4
Published: over 5 years ago
10.5713/ajas.18.0319
Genome wide association study on feed conversion ratio using imputed sequence data in chickensCited by: 2
Author(s): Jiaying Wang, Xiaolong Yuan, Shaopan Ye, Shuwen Huang, Yingting He, Hao Zhang, Jiaqi Li, Xiquan Zhang, Zhe Zhang
Software Mentions: 3
Published: about 6 years ago
10.3389/fgene.2014.00250
Phenome-wide association studies demonstrating pleiotropy of genetic variants within FTO with and without adjustment for body mass indexCited by: 60
Author(s): Robert M. Cronin, Julie R. Field, Yuki Bradford, Christian M. Shaffer, Robert J. Carroll, Jonathan D. Mosley, Lisa Bastarache, Todd L. Edwards, Scott J. Hebbring, Simon Lin, Lucia A. Hindorff, Paul K. Crane, Sarah A. Pendergrass, Marylyn D. Ritchie, Dana C. Crawford, Jyotishman Pathak, Suzette J. Bielinski, David Carrell, David R. Crosslin, David H. Ledbetter, David J. Carey, Gerard Tromp, Marc S. Williams, Eric B. Larson, Gail P. Jarvik, Peggy L. Peissig, Murray H. Brilliant, Catherine A. McCarty, Christopher G. Chute, Iftikhar J. Kullo, Erwin Böttinger, Rex L. Chisholm, Maureen E. Smith, Dan M. Roden, Joshua C. Denny
Software Mentions: 3
Published: over 10 years ago
10.1186/s13075-017-1276-2
DNA methylation mediates genotype and smoking interaction in the development of anti-citrullinated peptide antibody-positive rheumatoid arthritisCited by: 46
Author(s): Wen Jun Meng, Zaihua Zhu, Xia Jiang, Chun Lai Too, Steffen Uebe, Maja Jagodic, Ingrid Kockum, Shahnaz Murad, Luigi Ferrucci, Lars Alfredsson, Hejian Zou, Lars Klareskog, Andrew P. Feinberg, Tomas J. Ekström, Leonid Padyukov, Yun Liu
Software Mentions: 2
Published: over 7 years ago
10.3389/fpls.2017.01039
Gibberellins Promote Brassinosteroids Action and Both Increase Heterosis for Plant Height in Maize (Zea mays L.)Cited by: 28
Author(s): Songlin Hu, Cuiling Wang, Darlene L. Sanchez, Alexander E. Lipka, Peng Liu, Yanhai Yin, Michael Blanco, Thomas Lübberstedt
Software Mentions: 2
Published: over 7 years ago
10.1038/s41438-019-0190-y
Genome-wide association studies in apple reveal loci of large effect controlling apple polyphenolsCited by: 44
Author(s): Kendra A. McClure, YuiHui Gong, Jun Song, Melinda Vinqvist‐Tymchuk, Leslie Campbell Palmer, Lihua Fan, Karen Burgher-MacLellan, Zhaoqi Zhang, Jean‐Marc Celton, Charles F. Forney, Zoë Migicovsky, Sean Myles
Software Mentions: 2
Published: about 5 years ago
10.1371/journal.pone.0108255
Analysis of Maize (Zea mays L.) Seedling Roots with the High-Throughput Image Analysis Tool ARIA (Automatic Root Image Analysis)Cited by: 83
Author(s): Jordon Pace, Nigel Lee, Hsiang Sing Naik, Baskar Ganapathysubramanian, Thomas Lübberstedt
Software Mentions: 2
Published: about 10 years ago
10.3389/fgene.2018.00128
Genome-Wide Association Analysis of Age-Dependent Egg Weights in ChickensCited by: 18
Author(s): Zhuang Liu, Chang Sun, Yong-Bin Yan, Guangqi Li, Guiqin Wu, Aiqiao Liu, Ning Yang
Software Mentions: 1
Published: over 6 years ago
10.3389/fpls.2017.01930
The Terpene Synthase Gene Family of Carrot (Daucus carota L.): Identification of QTLs and Candidate Genes Associated with Terpenoid Volatile CompoundsCited by: 55
Author(s): Jens Keilwagen, Heike Lehnert, Thomas Berner, Holger Budahn, Thomas Nothnagel, Detlef Ulrich, Frank Dunemann
Software Mentions: 1
Published: almost 7 years ago
10.1186/s12284-017-0184-z
Genome-wide association mapping for root cone angle in riceCited by: 22
Author(s): Mathilde Bettembourg, Audrey Dardou, Alain Audebert, Emilie Thomas, Julien Frouin, Emmanuel Guiderdoni, Nourollah Ahmadi, Christophe Périn, Anne Diévart, B. Courtois
Software Mentions: 1
Published: about 7 years ago
10.1038/s41598-018-29162-7
Genetic variations for egg quality of chickens at late laying period revealed by genome-wide association studyCited by: 35
Author(s): Zhuang Liu, Chang Sun, Yong-Bin Yan, Guangqi Li, Fengying Shi, Guiqin Wu, Aiqiao Liu, Ning Yang
Software Mentions: 1
Published: over 6 years ago
10.1038/s41398-020-0849-z
A novel genomic region on chromosome 11 associated with fearfulness in dogsCited by: 8
Author(s): Riika Sarviaho, Osmo Hakosalo, Katriina Tiira, Sini Sulkama, Julia E. Niskanen, Marjo K. Hytönen, Mikko J. Sillanpää, Hannes Lohi
Software Mentions: 1
Published: over 4 years ago
10.5713/ajas.18.0274
Genetic architecture and candidate genes detected for chicken internal organ weight with a 600 K single nucleotide polymorphism arrayCited by: 6
Author(s): Taocun Dou, Manman Shen, Meng Ma, Liang Qu, Yongfeng Li, Yuping Hu, Jian Lü, Jun Guo, Xingguo Wang, Kehua Wang
Software Mentions: 1
Published: over 5 years ago
10.1186/s12864-015-1226-9
Genome-wide association analysis of seedling root development in maize (Zea mays L.)Cited by: 129
Author(s): Jordon Pace, C Gardner, M. Cinta Romay, Baskar Ganapathysubramanian, Thomas Lübberstedt
Software Mentions: 1
Published: almost 10 years ago
10.1186/s12864-016-2918-5
Genome-wide association mapping of partial resistance to Phytophthora sojae in soybean plant introductions from the Republic of KoreaCited by: 41
Author(s): Rhiannon Schneider, William Rolling, Qijian Song, Perry B. Cregan, Anne E. Dorrance, Leah K. McHale
Software Mentions: 1
Published: about 8 years ago
10.1186/s12864-019-6422-6
Genetic dissection of canine hip dysplasia phenotypes and osteoarthritis reveals three novel lociCited by: 12
Author(s): Lea Mikkola, Saila Holopainen, Tiina Pessa‐Morikawa, Anu K. Lappalainen, Marjo K. Hytönen, Hannes Lohi, Antti Iivanainen
Software Mentions: 1
Published: almost 5 years ago
10.1186/s12864-021-07874-x
Genome-wide association screening and verification of potential genes associated with root architectural traits in maize (Zea mays L.) at multiple seedling stagesCited by: 9
Author(s): Abdourazak Alio Moussa, Ajmal Mandozai, Yukun Jin, Junle Qu, Qi Zhang, He Zhao, Gulaqa Anwari, Mohamed Abdelsamiaa Sayed Khalifa, Abraham Lamboro, Muhammad Noman, Yacoubou Bakasso, Mo Zhang, Shuyan Guan, Piwu Wang
Software Mentions: 1
Published: over 3 years ago
10.1111/pbi.13188
Analysis of the genetic architecture of maize kernel size traits by combined linkage and association mappingCited by: 55
Author(s): Min Liu, Xiaolong Tan, Yan Yang, Peng Liu, Xiaoxiang Zhang, Yinchao Zhang, Lei Wang, Yu Hu, Langlang Ma, Zhaoling Li, Yanling Zhang, Chaoying Zou, Hung-Ching Lin, Shibin Gao, Michael Lee, Thomas Lübberstedt, Guangtang Pan, Yaou Shen
Software Mentions: 1
Published: over 5 years ago
10.1371/journal.pgen.1002237
Genome-Wide Gene-Environment Study Identifies Glutamate Receptor Gene GRIN2A as a Parkinson's Disease Modifier Gene via Interaction with CoffeeCited by: 200
Author(s): Taye H. Hamza, Honglei Chen, Erin M. Hill-Burns, Shannon Rhodes, Jennifer S. Montimurro, Denise M. Kay, Albert Tenesa, Victoria I. Kusel, Patricia Sheehan, Muthukrishnan Eaaswarkhanth, Dora Yearout, Ali Samii, John W. Roberts, Pinky Agarwal, Yvette Bordelon, Yikyung Park, Liyong Wang, Jianjun Gao, Jeffery M. Vance, Kenneth S. Kendler, Silviu‐Alin Bacanu, William K. Scott, Beate Ritz, John G. Nutt, Stewart A. Factor, Cyrus P. Zabetian, Haydeh Payami
Software Mentions: 1
Published: about 13 years ago
10.1371/journal.pone.0038172
Identification of Sialyltransferase 8B as a Generalized Susceptibility Gene for Psychotic and Mood Disorders on Chromosome 15q25-26Cited by: 60
Author(s): Erica Z. McAuley, Anna Scimone, Yash Tiwari, Giti Agahi, Bryan Mowry, Elizabeth G. Holliday, Jennifer A. Donald, Cynthia Shannon Weickert, Philip B. Mitchell, Peter R. Schofield, Janice M. Fullerton
Software Mentions: 1
Published: over 12 years ago
10.1371/journal.pone.0132028
Genetic Determinants of Metabolism and Benign Prostate Enlargement: Associations with Prostate VolumeCited by: 14
Author(s): Ayush Giri, Todd L. Edwards, Saundra Motley, Susan Byerly, Jay H. Fowke
Software Mentions: 1
Published: over 9 years ago
10.1371/journal.pone.0037903
An X Chromosome Association Scan of the Norfolk Island Genetic Isolate Provides Evidence for a Novel Migraine Susceptibility Locus at Xq12Cited by: 13
Author(s): Bridget Maher, Rodney Arthur Lea, Miles C. Benton, Hannah Cox, Claire Bellis, Melanie A. Carless, Thomas D. Dyer, Joanne E. Curran, Jac Charlesworth, Julie E. Buring, Tobias Kurth, Daniel I. Chasman, Paul M. Ridker, Markus Schürks, John Blangero, Lyn R. Griffiths
Software Mentions: 1
Published: over 12 years ago