Projects: pypi: seqlogo
https://packages.ecosyste.ms/registries/pypi.org/packages/seqlogo
Python port of the R Bioconductor `seqlogo` package
37 versions
Latest release: about 5 years ago
2 dependent packages
770 downloads last month
Enhanced Analysis
Repository Activity:
Repository Owner:
Marcus D Sherman (user)
PhD candidate in DCMB at the UMich. Member of @mills-lab. @PyDataAnnArbor volunteer, @PyCon staff Academic
PhD candidate in DCMB at the UMich. Member of @mills-lab. @PyDataAnnArbor volunteer, @PyCon staff Academic
README Analysis:
Science Score: 75/100
Starting Score: 100 points
Bonuses:
-
+20
Academic repository owner
Repository owned by academic institution -
+16
Science terms in README
8 scientific terms found in README
Penalties:
-
-10
PyPI ecosystem
General-purpose ecosystem -
-10
No science terms in description
No scientific terms found in description -
-25
Non-science indicators
1 non-scientific terms found
Very Likely Science (75)
Papers Mentioning seqlogo 11
10.26508/lsa.202000731
Exploiting somatic piRNAs in <i>Bemisia tabac</i>i enables novel gene silencing through RNA feedingCited by: 18
Author(s): Mosharrof Mondal, Judith K. Brown, Alex S. Flynt
Software Mentions: 6
Published: almost 5 years ago
10.1186/1471-2148-7-78
Phylogenetic analysis of condensation domains in NRPS sheds light on their functional evolutionCited by: 279
Author(s): Christian Rausch, Ilka Hoof, Tilmann Weber, Wolfgang Wohlleben, Daniel H. Huson
Software Mentions: 3
Published: over 18 years ago
10.1186/s13072-019-0307-4
DNA methylation is maintained with high fidelity in the honey bee germline and exhibits global non-functional fluctuations during somatic developmentCited by: 40
Author(s): Keith D. Harris, James P. B. Lloyd, Katherine Domb, Daniel Zilberman, Assaf Zemach
Software Mentions: 3
Published: almost 6 years ago
10.3389/fnagi.2020.603793
Sporadic Parkinson’s Disease Potential Risk Loci Identified in Han Ancestry of Chinese MainlandCited by: 2
Author(s): Bo Wang, Xin Liu, Shengyuan Xu, Zheng Liu, Yong Zhu, Xiong Zhang, Renshi Xu
Software Mentions: 3
Published: over 4 years ago
10.1002/mgg3.1479
Multimodal imaging and genetic characteristics of Chinese patients with <i>USH2A</i> ‐associated nonsyndromic retinitis pigmentosaCited by: 4
Author(s): Chong Chen, Qiao Sun, Meng Gu, Tianwei Qian, Da Luo, Kun Liu, Xun Xu, Shizhu Yu
Software Mentions: 2
Published: almost 5 years ago
10.1186/1471-2105-6-114
Cited by: 6Author(s): Jianhua Ruan, Weixiong Zhang
Software Mentions: 2
Published: over 20 years ago
10.1186/gb-2007-8-2-r24
Quantifying similarity between motifsCited by: 1,493
Author(s): Sidhant Gupta, J Stamatoyannopoulos, Timothy L. Bailey, William Stafford Noble
Software Mentions: 2
Published: over 18 years ago
10.1371/journal.pcbi.1000147
A General Definition and Nomenclature for Alternative Splicing EventsCited by: 211
Author(s): Michael Sammeth, Sylvain Foissac, Roderic Guigó
Software Mentions: 2
Published: almost 17 years ago
10.7554/eLife.19090
Structure of the germline genome of Tetrahymena thermophila and relationship to the massively rearranged somatic genomeCited by: 123
Author(s): Eileen P. Hamilton, Aurélie Kapusta, Piroska Hüvös, Shelby L. Bidwell, Nikhat Zafar, Haibao Tang, Michalis Hadjithomas, Vivek Krishnakumar, Jonathan H. Badger, Elisabet Caler, Carsten Russ, Qiandong Zeng, Fan Lin, Joshua Z. Levin, Terrance Shea, Sarah Young, Ryan Hegarty, Riza M. Daza, Sharvari Gujja, Jennifer Wortman, Bruce W. Birren, Chad Nusbaum, Jainy Thomas, Clayton M. Carey, Ellen J. Pritham, Cédric Feschotte, Tomoko Noto, Kazufumi Mochizuki, Romeo Papazyan, Sean D. Taverna, Paul H. Dear, Donna Cassidy-Hanley, Jie Xiong, Wei Miao, Eduardo Orias, Robert S. Coyne
Software Mentions: 1
Published: over 8 years ago
10.1371/journal.ppat.1000838
Structural and Functional Analysis of Viral siRNAsCited by: 124
Author(s): György Szittya, Simon Moxon, Vitantonio Pantaleo, Gábor Tóth, Rachel L. Rusholme Pilcher, Vincent Moulton, József Burgyán, Tamás Dalmay
Software Mentions: 1
Published: over 15 years ago
10.1186/1471-2105-7-76
BIPAD: A web server for modeling bipartite sequence elementsCited by: 15
Author(s): Chengpeng Bi, Peter K. Rogan
Software Mentions: 1
Published: over 19 years ago