Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: pypi: seqlogo

https://packages.ecosyste.ms/registries/pypi.org/packages/seqlogo

Python port of the R Bioconductor `seqlogo` package
37 versions
Latest release: over 4 years ago
2 dependent packages
770 downloads last month

Papers Mentioning seqlogo 11

Exploiting somatic piRNAs in <i>Bemisia tabac</i>i enables novel gene silencing through RNA feeding
Cited by: 18
Author(s): Mosharrof Mondal, Judith K. Brown, Alex S. Flynt
Software Mentions: 6
Published: over 4 years ago

10.1186/1471-2148-7-78

Phylogenetic analysis of condensation domains in NRPS sheds light on their functional evolution
Cited by: 279
Author(s): Christian Rausch, Ilka Hoof, Tilmann Weber, Wolfgang Wohlleben, Daniel H. Huson
Software Mentions: 3
Published: almost 18 years ago

10.1186/s13072-019-0307-4

DNA methylation is maintained with high fidelity in the honey bee germline and exhibits global non-functional fluctuations during somatic development
Cited by: 40
Author(s): Keith D. Harris, James P. B. Lloyd, Katherine Domb, Daniel Zilberman, Assaf Zemach
Software Mentions: 3
Published: about 5 years ago

10.3389/fnagi.2020.603793

Sporadic Parkinson’s Disease Potential Risk Loci Identified in Han Ancestry of Chinese Mainland
Cited by: 2
Author(s): Bo Wang, Xin Liu, Shengyuan Xu, Zheng Liu, Yong Zhu, Xiong Zhang, Renshi Xu
Software Mentions: 3
Published: almost 4 years ago

10.1002/mgg3.1479

Multimodal imaging and genetic characteristics of Chinese patients with <i>USH2A</i> ‐associated nonsyndromic retinitis pigmentosa
Cited by: 4
Author(s): Chong Chen, Qiao Sun, Meng Gu, Tianwei Qian, Da Luo, Kun Liu, Xun Xu, Shizhu Yu
Software Mentions: 2
Published: about 4 years ago

10.1186/1471-2105-6-114

Cited by: 6
Author(s): Jianhua Ruan, Weixiong Zhang
Software Mentions: 2
Published: almost 20 years ago

10.1186/gb-2007-8-2-r24

Quantifying similarity between motifs
Cited by: 1,493
Author(s): Sidhant Gupta, J Stamatoyannopoulos, Timothy L. Bailey, William Stafford Noble
Software Mentions: 2
Published: almost 18 years ago

10.1371/journal.pcbi.1000147

A General Definition and Nomenclature for Alternative Splicing Events
Cited by: 211
Author(s): Michael Sammeth, Sylvain Foissac, Roderic Guigó
Software Mentions: 2
Published: over 16 years ago

10.7554/eLife.19090

Structure of the germline genome of Tetrahymena thermophila and relationship to the massively rearranged somatic genome
Cited by: 123
Author(s): Eileen P. Hamilton, Aurélie Kapusta, Piroska Hüvös, Shelby L. Bidwell, Nikhat Zafar, Haibao Tang, Michalis Hadjithomas, Vivek Krishnakumar, Jonathan H. Badger, Elisabet Caler, Carsten Russ, Qiandong Zeng, Fan Lin, Joshua Z. Levin, Terrance Shea, Sarah Young, Ryan Hegarty, Riza M. Daza, Sharvari Gujja, Jennifer Wortman, Bruce W. Birren, Chad Nusbaum, Jainy Thomas, Clayton M. Carey, Ellen J. Pritham, Cédric Feschotte, Tomoko Noto, Kazufumi Mochizuki, Romeo Papazyan, Sean D. Taverna, Paul H. Dear, Donna Cassidy-Hanley, Jie Xiong, Wei Miao, Eduardo Orias, Robert S. Coyne
Software Mentions: 1
Published: almost 8 years ago

10.1371/journal.ppat.1000838

Structural and Functional Analysis of Viral siRNAs
Cited by: 124
Author(s): György Szittya, Simon Moxon, Vitantonio Pantaleo, Gábor Tóth, Rachel L. Rusholme Pilcher, Vincent Moulton, József Burgyán, Tamás Dalmay
Software Mentions: 1
Published: over 14 years ago

10.1186/1471-2105-7-76

BIPAD: A web server for modeling bipartite sequence elements
Cited by: 15
Author(s): Chengpeng Bi, Peter K. Rogan
Software Mentions: 1
Published: almost 19 years ago