Projects: pypi: seqenv
https://packages.ecosyste.ms/registries/pypi.org/packages/seqenv
Assign environment ontology (EnvO) terms to DNA sequences
13 versions
Latest release: over 9 years ago
16 downloads last month
Enhanced Analysis
Educational Contributors:
c.quince@warwick.ac.uk
seqenv@quince-srv2.eng.gla.ac.uk
Repository Activity:
Repository Owner:
Lucas Sinclair (user)
Bioinformatics consulting, Data Science, DevOps
Bioinformatics consulting, Data Science, DevOps
README Analysis:
Science Score: 100/100
Starting Score: 100 points
Bonuses:
-
+40
Educational commit emails
2 contributors with educational email addresses -
+24
Science terms in README
12 scientific terms found in README -
+20
DOI references
2 DOI references found in README
Penalties:
-
-10
PyPI ecosystem
General-purpose ecosystem -
-10
No science terms in description
No scientific terms found in description
Very Likely Science (100)
Papers Mentioning seqenv 3
10.7717/peerj.5047
An automated identification and analysis of ontological terms in gastrointestinal diseases and nutrition-related literature provides useful insightsCited by: 2
Author(s): Orges Koci, Michael Logan, Vaios Svolos, Richard K. Russell, Konstantinos Gerasimidis, Umer Zeeshan Ijaz
Software Mentions: 2
Published: almost 8 years ago
10.3389/fmicb.2018.00236
Benthic Bacterial Community Composition in the Oligohaline-Marine Transition of Surface Sediments in the Baltic Sea Based on rRNA AnalysisCited by: 28
Author(s): Julia Klier, Olaf Dellwig, Thomas Leipe, Klaus Jürgens, Daniel P. R. Herlemann
Software Mentions: 2
Published: over 8 years ago
10.7717/peerj.2690
<tt>Seqenv</tt>: linking sequences to environments through text miningCited by: 22
Author(s): Lucas Sinclair, Umer Ijaz, Lars Juhl Jensen, Marco J. L. Coolen, Cécile Gubry‐Rangin, Alica Chroňáková, Anastasis Oulas, Christina Pavloudi, Julia Schnetzer, Aaron Weimann, Ali Zeeshan Ijaz, Alexander Eiler, Christopher Quince, Evangelos Pafilis
Software Mentions: 1
Published: over 9 years ago