pypi: seaborn | Projects | Ecosyste.ms: Papers

10.1002/1878-0261.13041

Characterization of fragment sizes, copy number aberrations and 4‐mer end motifs in cell‐free DNA of hepatocellular carcinoma for enhanced liquid biopsy‐based cancer detection
Cited by: 10
Author(s): Chao Jin, Xiaonan Liu, Wenyuan Zheng, Liping Su, Liu Yang, Xu Guo, Xiaoming Gu, Hongping Li, Bo Xu, Gang Wang, Jing Yu, Qiong Zhang, Dan Bao, Shaogui Wan, Fei Xu, Xiaohuan Lai, Jiayun Liu, Jinliang Xing
Software Mentions: 3
Published: over 3 years ago

10.3390/molecules26154475

Prediction of Molecular Properties Using Molecular Topographic Map
Cited by: 8
Author(s): Atsushi Yoshimori
Software Mentions: 3
Published: over 3 years ago

10.1093/gbe/evab077

Homoeolog Inference Methods Requiring Bidirectional Best Hits or Synteny Miss Many Pairs
Cited by: 3
Author(s): Natasha Glover, Shaoline Sheppard, Christophe Dessimoz
Software Mentions: 3
Published: over 3 years ago

10.1038/s41598-019-53751-9

Neurophysiological Correlates of Concussion: Deep Learning for Clinical Assessment
Cited by: 16
Author(s): Rober Boshra, Kyle I. Ruiter, Carol DeMatteo, J.P. Reilly, John F. Connolly
Software Mentions: 3
Published: almost 5 years ago

10.3390/molecules25143226

Comparative Assessment of Protein Kinase Inhibitors in Public Databases and in PKIDB
Cited by: 37
Author(s): Colin Bournez, Fabrice Carles, Gautier Peyrat, Samia Aci-Sèche, Stéphane Bourg, Christophe Meyer, Pascal Bonnet
Software Mentions: 3
Published: over 4 years ago

10.1021/acs.analchem.1c01359

Combined Metabolic and Chemical (CoMetChem) Labeling Using Stable Isotopes—a Strategy to Reveal Site-Specific Histone Acetylation and Deacetylation Rates by LC–MS
Cited by: 1
Author(s): Alienke van Pijkeren, Jörn Dietze, Alejandro Sánchez Brotons, Anna-Sophia Egger, Tim Lijster, Andrei Barcaru, Madlen Hotze, Philipp Kobler, Frank J. Dekker, Péter Horvatovich, Barbro N. Melgert, Mathias Ziegler, Kathrin Thedieck, Ines Heiland, Rainer Bischoff, Marcel Kwiatkowski
Software Mentions: 3
Published: about 3 years ago

10.3390/md16100386

Kororamides, Convolutamines, and Indole Derivatives as Possible Tau and Dual-Specificity Kinase Inhibitors for Alzheimer’s Disease: A Computational Study
Cited by: 25
Author(s): Laura Llorach-Parés, Alfons Nonell-Canals, Conxita Àvila, Melchor Sánchez-Martínez
Software Mentions: 3
Published: about 6 years ago

10.2196/23229

A Biofeedback App for Migraine: Development and Usability Study
Cited by: 7
Author(s): Sigrid Hegna Ingvaldsen, Erling Tronvik, Eiliv Brenner, Ingunn Winnberg, Alexander Olsen, Gøril Bruvik Gravdahl, Anker Stubberud
Software Mentions: 3
Published: over 3 years ago

10.3390/insects12010004

Tracing the Invasion and Expansion Characteristics of the Flatid Planthopper, Metcalfa pruinosa (Hemiptera: Flatidae), in Korea Using Mitochondrial DNA Sequences
Cited by: 4
Author(s): Keon Hee Lee, Jun Seong Jeong, Jeong Sun Park, Min Jee Kim, Na Ra Jeong, Su Yeon Jeong, Gwan Seok Lee, Wonhoon Lee, Iksoo Kim
Software Mentions: 3
Published: almost 4 years ago

10.3390/plants10040646

New Cross-Talks between Pathways Involved in Grapevine Infection with ‘Candidatus Phytoplasma solani’ Revealed by Temporal Network Modelling
Cited by: 3
Author(s): Blaž Škrlj, Maruša Pompe-Novak, Günter Brader, Barbara Anžič, Živa Ramšak, Kristina Gruden, Jan Kralj, Aleš Kladnik, Nada Lavrač, Thomas Roitsch, Marina Dermastia
Software Mentions: 3
Published: over 3 years ago

10.17912/micropub.biology.000230

Loss of fuss in Drosophila melanogaster results in decreased locomotor activity due to an increased number of pauses.
Cited by: 1
Author(s): Mathias Raß, Svenja Oestreich, Ardi Manaj, Stephan Schneuwly
Software Mentions: 3
Published: over 4 years ago

10.7554/eLife.22268

Distribution of neurosensory progenitor pools during inner ear morphogenesis unveiled by cell lineage reconstruction
Cited by: 18
Author(s): Sylvia Dyballa, Thierry Savy, Philipp Germann, Karol Mikula, Mariana Remešíková, Róbert Špir, Andrea Zecca, Nadine Peyriéras, Cristina Pujades
Software Mentions: 3
Published: almost 8 years ago

10.1186/s40168-017-0284-4

Transplanted human fecal microbiota enhanced Guillain Barré syndrome autoantibody responses after Campylobacter jejuni infection in C57BL/6 mice
Cited by: 28
Author(s): Phillip T. Brooks, Kelsey A. Brakel, Julia A. Bell, Christopher E. Bejcek, Trey E. Gilpin, Jean M. Brudvig, Linda S. Mansfield
Software Mentions: 3
Published: over 7 years ago

10.7554/eLife.64776

HIV-1 uncoating by release of viral cDNA from capsid-like structures in the nucleus of infected cells
Cited by: 59
Author(s): Thorsten G. Müller, Vojtěch Žíla, Kyra Peters, Sandra Schifferdecker, Mia Stanić, Bojana Lucic, Vibor Laketa, Marina Lušić, Bárbara Müller, Hans‐Georg Kräusslich
Software Mentions: 3
Published: over 3 years ago

10.1186/s40168-016-0225-7

Microbiota Transfer Therapy alters gut ecosystem and improves gastrointestinal and autism symptoms: an open-label study
Cited by: 832
Author(s): Dae Wook Kang, James B. Adams, Ann C. Gregory, Thomas J. Borody, Lauren Chittick, Alessio Fasano, Alexander Khoruts, E. Geis, Juan Maldonado, Sharon McDonough-Means, Elena L. Pollard, Simon Roux, Michael J. Sadowsky, Karen Schwarzberg Lipson, Matthew B. Sullivan, J. Gregory Caporaso, Rosa Krajmalnik‐Brown
Software Mentions: 3
Published: almost 8 years ago

10.1128/JCM.01822-19

Optimizing DNA Extraction Methods for Nanopore Sequencing of Neisseria gonorrhoeae Directly from Urine Samples
Cited by: 28
Author(s): Teresa Street, Leanne Barker, Nicholas D. Sanderson, James Kavanagh, Sarah Hoosdally, Kevin N. Cole, Robert Newnham, Mathyruban Selvaratnam, Monique Andersson, Martin J. Llewelyn, Justin O’Grady, Derrick W. Crook, David W Eyre
Software Mentions: 3
Published: over 4 years ago

10.3390/cancers13061315

Longitudinal Changes of Quality of Life and Hearing Following Radiosurgery for Vestibular Schwannoma
Cited by: 4
Author(s): Paul Windisch, Jörg‐Christian Tonn, Christoph Fürweger, Felix Ehret, Berndt Wowra, Markus Kufeld, Christian Schichor, Alexander Muacevic
Software Mentions: 3
Published: over 3 years ago

10.1136/gutjnl-2018-317071

Fine needle aspirates comprehensively sample intrahepatic immunity
Cited by: 60
Author(s): Upkar S. Gill, Laura J. Pallett, Niclas Thomas, Alice R. Burton, Amit A. Patel, Simon Yona, Patrick Kennedy, Mala K. Maini
Software Mentions: 3
Published: almost 6 years ago

10.1038/s41598-020-64643-8

Multi-classifier prediction of knee osteoarthritis progression from incomplete imbalanced longitudinal data
Cited by: 45
Author(s): Paweł Widera, Paco M J Welsing, Christoph Ladel, John Loughlin, F.P. Lafeber, Florence Petit Dop, J. Larkin, Harrie Weinans, Ali Mobasheri, Jaume Bacardit
Software Mentions: 3
Published: over 4 years ago

10.1098/rstb.2020.0248

Vocal learning in songbirds: the role of syllable order in song recognition
Cited by: 5
Author(s): Carien Mol, Johan J. Bolhuis, Sanne Moorman
Software Mentions: 3
Published: about 3 years ago

10.1038/srep20788

Activation and inhibition of tph2 serotonergic neurons operate in tandem to influence larval zebrafish preference for light over darkness
Cited by: 27
Author(s): Ruey‐Kuang Cheng, Seetha Krishnan, Suresh Jesuthasan
Software Mentions: 3
Published: almost 9 years ago

10.7150/jca.49594

Specific MiRNAs in naïve T cells associated with Hepatitis C Virus-induced Hepatocellular Carcinoma
Cited by: 6
Author(s): Yan Peng, Pengfei Pang, Xiaojun Hu, Ani Wang, Huitao Zhang, Yingdong Ma, Ke Zhang, Yaochao Ye, Bin Zhou, Junjie Mao
Software Mentions: 3
Published: almost 4 years ago

10.1186/s12859-021-04405-z

Identification, visualization, statistical analysis and mathematical modeling of high-feedback loops in gene regulatory networks
Cited by: 9
Author(s): Benjamin Nordick, Tian Hong
Software Mentions: 3
Published: about 3 years ago

10.1371/journal.pone.0165556

Is Neural Activity Detected by ERP-Based Brain-Computer Interfaces Task Specific?
Cited by: 6
Author(s): Markus Wenzel, Inês Almeida, Benjamin Blankertz
Software Mentions: 3
Published: about 8 years ago

10.3389/fimmu.2021.593595

Clinical and Immunological Factors That Distinguish COVID-19 From Pandemic Influenza A(H1N1)
Cited by: 25
Author(s): José Alberto Choreño-Parra, Luis Armando Jiménez-Álvarez, Alfredo Cruz‐Lagunas, Tatiana Sofia Rodrı́guez-Reyna, Gustavo Ramírez-Martínez, Montserrat Sandoval-Vega, Diana Lizzeth Hernández-García, Eduardo M. Choreño-Parra, Yalbi I. Balderas-Martínez, Mariana Esther Martínez-Sánchez, Eduardo Márquez-García, Edda Sciutto, José Moreno-Rodríguez, José Omar Barreto-Rodríguez, Hazel Vázquez-Rojas, Gustavo Iván Centeno-Sáenz, Néstor Alvarado-Peña, Citlaltépetl Salinas-Lara, Carlos Sánchez-Garibay, David Galeana-Cadena, Gabriela Hernández, Criselda Mendoza-Milla, Andrea Domínguez, Julio Granados, Lula Mena-Hernández, Luis Ángel Pérez-Buenfil, Guillermo Domínguez-Cheritt, Carlos Cabello-Gutiérrez, César Luna-Rivero, Jorge Salas-Hernández, Patricio Santillán-Doherty, Justino Regalado, Angélica Hernández-Martínez, Lorena Orozco, Federico Ávila‐Moreno, Ethel Garcı́a-Latorre, Carmen Margarita Hernández-Cárdenas, Shabaana A. Khader, Albert Zlotnik, Joaquı́n Zúñiga
Software Mentions: 3
Published: over 3 years ago

10.3389/fonc.2021.605296

Prediction of Post-hepatectomy Liver Failure in Patients With Hepatocellular Carcinoma Based on Radiomics Using Gd-EOB-DTPA-Enhanced MRI: The Liver Failure Model
Cited by: 15
Author(s): Yuyan Chen, Zelong Liu, Yun Xian Mo, Bin Li, Qian Zhou, Sui Peng, Shaoqiang Li, Ming Kuang
Software Mentions: 3
Published: over 3 years ago

10.1093/gigascience/giaa159

Genome diversity in Ukraine
Cited by: 7
Author(s): Tarás K. Oleksyk, Walter Wolfsberger, Alexandra M. Weber, Khrystyna Shchubelka, О.T. Oleksyk, Olga Levchuk, Alla Patrus, Nelya Lazar, Stephanie O Castro-Marquez, Yaroslava Hasynets, Patricia Boldyzhar, Mikhailo Neymet, Alina Urbanovych, Viktoriya Stakhovska, Kateryna Malyar, Svitlana Chervyakova, Olena Podoroha, Natalia Kovalchuk, Juan L. Rodríguez-Flores, Weichen Zhou, Sarah Medley, Fabia U. Battistuzzi, Ryan Liu, Yong Hou, Siru Chen, Huanming Yang, Meredith Yeager, Michael Dean, Ryan E. Mills, Volodymyr Smolanka
Software Mentions: 3
Published: almost 4 years ago

10.1186/s13059-017-1186-2

Epigenetic aging signatures in mice livers are slowed by dwarfism, calorie restriction and rapamycin treatment
Cited by: 232
Author(s): Tina Wang, Brian Tsui, Jason F. Kreisberg, Neil Robertson, Andrew M. Gross, Michael Yu, Hannah Carter, Holly M. Brown–Borg, Peter D. Adams, Trey Ideker
Software Mentions: 3
Published: over 7 years ago

10.1200/PO.20.00182

Impact of a 40-Gene Targeted Panel Test on Physician Decision Making for Patients With Acute Myeloid Leukemia
Cited by: 4
Author(s): Erica K. Barnell, Kenneth F. Newcomer, Zachary L. Skidmore, Kilannin Krysiak, Sydney R. Anderson, Lukas D. Wartman, Stephen T. Oh, John S. Welch, Keith Stockerl-Goldstein, Ravi Vij, Amanda F. Cashen, Iskra Pusic, Peter Westervelt, Camille N. Abboud, Armin Ghobadi, Brian Uy, Mark A. Schroeder, John F. DiPersio, Mary C. Politi, David H. Spencer, Timothy J. Ley, Malachi Griffith, Meagan A. Jacoby
Software Mentions: 2
Published: about 3 years ago

10.1186/s13321-019-0393-0

Randomized SMILES strings improve the quality of molecular generative models
Cited by: 151
Author(s): Josep Arús‐Pous, Stina Johansson, Oleksii Prykhodko, Esben Jannik Bjerrum, Christian Tyrchan, Jean‐Louis Reymond, Hongming Chen, Ola Engkvist
Software Mentions: 2
Published: about 5 years ago

10.1016/j.csbj.2021.06.013

Structural binding site comparisons reveal Crizotinib as a novel LRRK2 inhibitor
Cited by: 9
Author(s): Sarah Naomi Bolz, Sebastian Salentin, Gary Jennings, V. Joachim Haupt, Jared Sterneckert, Michael Schroeder
Software Mentions: 2
Published: almost 4 years ago

10.3390/cells9112525

MicroRNAs and Mammarenaviruses: Modulating Cellular Metabolism
Cited by: 2
Author(s): Jorlan Fernandes, Renan Lyra Miranda, Elba Regina Sampaio de Lemos, Alexandro Guterres
Software Mentions: 2
Published: almost 4 years ago

10.1371/journal.pone.0169293

Characterization of Multi-Drug Resistant Enterococcus faecalis Isolated from Cephalic Recording Chambers in Research Macaques (Macaca spp.)
Cited by: 16
Author(s): Stephanie E. Woods, Mia T Lieberman, François Lebreton, Elise M. Trowel, César de la Fuente-Núñez, Joanne Dzink-Fox, Michael S. Gilmore, James G. Fox
Software Mentions: 2
Published: almost 8 years ago

10.1038/srep31965

H3.3 demarcates GC-rich coding and subtelomeric regions and serves as potential memory mark for virulence gene expression in Plasmodium falciparum
Cited by: 22
Author(s): Sabine Anne‐Kristin Fraschka, Rob Henderson, Richárd Bártfai
Software Mentions: 2
Published: about 8 years ago

10.1371/journal.pone.0231069

Catch composition and life history characteristics of sharks and rays (Elasmobranchii) landed in the Andaman and Nicobar Islands, India
Cited by: 14
Author(s): Zoya Tyabji, Tanmay Wagh, Vardhan Patankar, Rima W. Jabado, Dipani Sutaria
Software Mentions: 2
Published: about 4 years ago

10.3390/ijms21249728

Biased Ligands Differentially Shape the Conformation of the Extracellular Loop Region in 5-HT2B Receptors
Cited by: 8
Author(s): Katrin Denzinger, Trung Ngoc Nguyen, Theresa Noonan, Gerhard Wolber, Marcel Bermudez
Software Mentions: 2
Published: almost 4 years ago

10.1186/s12915-020-00881-6

Genomic evidence for recurrent genetic admixture during the domestication of Mediterranean olive trees (Olea europaea L.)
Cited by: 27
Author(s): Irene Julca, Marina Marcet‐Houben, Fernando Cruz, Jèssica Gómez‐Garrido, Brandon S. Gaut, Concepción M. Díez, Marta Gut, Tyler Alioto, Pablo Vargas, Toni Gabaldón
Software Mentions: 2
Published: about 4 years ago

10.3390/ijms22063017

Integration of Data from Liquid–Liquid Phase Separation Databases Highlights Concentration and Dosage Sensitivity of LLPS Drivers
Cited by: 26
Author(s): Nazanin Farahi, Tamás Lázár, Shoshana J. Wodak, Péter Tompa, Rita Pancsa
Software Mentions: 2
Published: over 3 years ago

10.1371/journal.pone.0232849

Sequence-structure-function relationships in class I MHC: A local frustration perspective
Cited by: 17
Author(s): Onur Serçinoğlu, Pemra Ozbek
Software Mentions: 2
Published: over 4 years ago

10.3390/ijms22073544

Distinct Age-Specific miRegulome Profiling of Isolated Small and Large Intestinal Epithelial Cells in Mice
Cited by: 6
Author(s): Jun-Young Lee, Attayeb Mohsen, Anik Banerjee, Louise D. McCullough, Kenji Mizuguchi, Motomu Shimaoka, Hiroshi Kiyono, Eun Jeong Park
Software Mentions: 2
Published: over 3 years ago

10.1038/s41598-020-61173-1

A Novel System for Functional Determination of Variants of Uncertain Significance using Deep Convolutional Neural Networks
Cited by: 5
Author(s): Lior Zimmerman, Ori Zelichov, Arie Aizenmann, Zohar Barbash, Michael Vidne, Gabi Tarcic
Software Mentions: 2
Published: over 4 years ago

10.1107/S2059798321007610

New restraints and validation approaches for nucleic acid structures in PDB-REDO
Cited by: 4
Author(s): Ida de Vries, Tim Kwakman, Xiang‐Jun Lu, Maarten L. Hekkelman, Mandar Deshpande, Sameer Velankar, Anastassis Perrakis, Robbie P. Joosten
Software Mentions: 2
Published: about 3 years ago

10.1038/s41598-020-73253-3

Reconstruction and analysis of genome-scale metabolic model of weak Crabtree positive yeast Lachancea kluyveri
Cited by: 9
Author(s): Piyush Nanda, Pradipta Patra, Manali Das, Amit Ghosh
Software Mentions: 2
Published: about 4 years ago

10.1038/s41598-020-76162-7

A comparative analysis for spatio-temporal spreading patterns of emergency news
Cited by: 8
Author(s): Meng Si, Lizhen Cui, Wei Guo, Qingzhong Li, Lei Liu, Xudong Lü, Xin Lü
Software Mentions: 2
Published: about 4 years ago

10.1098/rstb.2018.0088

A matter of background: DNA repair pathways as a possible cause for the sparse distribution of CRISPR-Cas systems in bacteria
Cited by: 29
Author(s): Aude Bernheim, David Bikard, Marie Touchon, Eduardo P. C. Rocha
Software Mentions: 2
Published: over 5 years ago

10.3390/ph14090919

Testing the Stability of Drug Resistance on Cryopreserved, Gene-Engineered Human Induced Pluripotent Stem Cells
Cited by: 1
Author(s): Dilaware Khan, Ann-Christin Nickel, Sebastian Jeising, Constanze Uhlmann, Sajjad Muhammad, Daniel Hänggi, Igor Fischer, Ulf D. Kahlert
Software Mentions: 2
Published: about 3 years ago

10.1051/parasite/2020034

Genome-wide microsatellite characteristics of five human Plasmodium species, focusing on Plasmodium malariae and P. ovale curtisi
Cited by: 5
Author(s): Vivek Bhakta Mathema, Supatchara Nakeesathit, Nicholas J. White, Arjen M. Dondorp, Mallika Imwong
Software Mentions: 2
Published: almost 5 years ago

10.1038/s41598-021-89535-3

Urinary miRNA profiles discriminate between obstruction-induced bladder dysfunction and healthy controls
Cited by: 7
Author(s): Michelle von Siebenthal, Mustafa Besic, Ali Hashemi Gheinani, Akshay Akshay, Salomé Lizun-Platoni, Nadine Kunz, Fiona C. Burkhard, Katia Monastyrskaya
Software Mentions: 2
Published: over 3 years ago

10.1038/s41598-021-91885-x

Nanoscale slip length prediction with machine learning tools
Cited by: 16
Author(s): Filippos Sofos, Theodoros E. Karakasidis
Software Mentions: 2
Published: over 3 years ago

10.12688/wellcomeopenres.16119.1

Integrated genomic view of SARS-CoV-2 in India
Cited by: 34
Author(s): Pramod Kumar, Rajesh Pandey, Pooja Sharma, Mahesh Shanker Dhar, A Vivekanand, Bharathram Uppili, Himanshu Vashisht, Saruchi Wadhwa, Nishu Tyagi, Saman Fatihi, Uma Sharma, Priyanka Singh, Hemlata Lall, Meena Datta, Poonam Gupta, Nidhi Saini, Aarti Tewari, Bibhash Nandi, Dhirendra Kumar, Satyabrata Bag, Deepanshi Gahlot, Surabhi Rathore, Nidhi Jatana, Varun Jaiswal, Hema Gogia, Preeti Madan, Simrita Singh, Prateek Singh, Debasis Dash, Manju Bala, Sandhya Kabra, Sujeet Kumar Singh, Mitali Mukerji, Lipi Thukral, Mohammed Faruq, Anurag Agrawal, Partha Rakshit
Software Mentions: 2
Published: over 4 years ago

10.1038/s41598-021-94564-z

Interpretable deep recommender system model for prediction of kinase inhibitor efficacy across cancer cell lines
Cited by: 6
Author(s): Krzysztof Koras, Ewa Kizling, Dilafruz Juraeva, Eike Staub, Ewa Szczurek
Software Mentions: 2
Published: over 3 years ago

10.12688/wellcomeopenres.15201.3

Prediction of mosquito species and population age structure using mid-infrared spectroscopy and supervised machine learning
Cited by: 26
Author(s): Mario González‐Jiménez, Simon A. Babayan, Pegah Khazaeli, Margaret Doyle, Finlay Walton, Elliott Reedy, Thomas Glew, Mafalda Viana, Lisa Ranford-Cartwright, Abdoulaye Niang, Doreen J. Siria, Fredros O. Okumu, Abdoulaye Diabaté, Heather M. Ferguson, Francesco Baldini, Klaas Wynne
Software Mentions: 2
Published: about 5 years ago

10.1186/s12859-017-1786-6

C-State: an interactive web app for simultaneous multi-gene visualization and comparative epigenetic pattern search
Cited by: 2
Author(s): Divya Tej Sowpati, Surabhi Srivastava, Jyotsna Dhawan, Rakesh Mishra
Software Mentions: 2
Published: about 7 years ago

10.18632/oncotarget.27334

Analog-sensitive cell line identifies cellular substrates of CDK9
Cited by: 15
Author(s): Tim-Michael Decker, Ignasi Forné, Tobias Straub, Hesham Elsaman, Guoli Ma, Nilay Shah, Axel Imhof, Dirk Eick
Software Mentions: 2
Published: almost 5 years ago

10.1128/mBio.01348-21

Inhibiting Type VI Secretion System Activity with a Biomimetic Peptide Designed To Target the Baseplate Wedge Complex
Cited by: 5
Author(s): Yassine Cherrak, Isaac Filella-Merce, Victoria Schmidt, Deborah Byrne, V. Sgoluppi, R. Chaiaheloudjou, S. Betzi, Xavier Morelli, Michaël Nilges, Riccardo Pellarin, Éric Durand
Software Mentions: 2
Published: about 3 years ago

10.3390/ani10122201

Comparison of the Surface Thermal Patterns of Horses and Donkeys in Infrared Thermography Images
Cited by: 10
Author(s): Małgorzata Domino, Michał Romaszewski, Tomasz Jasiński, Małgorzata Maśko
Software Mentions: 2
Published: almost 4 years ago

10.3390/molecules26092454

Group Contribution Estimation of Ionic Liquid Melting Points: Critical Evaluation and Refinement of Existing Models
Cited by: 7
Author(s): Dhruve Kumar Mital, Paul Nancarrow, Samira Zeinab, Nabil Abdel Jabbar, Taleb H. Ibrahim, Mustafa Khamis, Alnoman Taha
Software Mentions: 2
Published: over 3 years ago

10.1063/1.5143779

Cell shape, and not 2D migration, predicts extracellular matrix-driven 3D cell invasion in breast cancer
Cited by: 35
Author(s): Janani P. Baskaran, Anna Weldy, Justinne R. Guarin, Gabrielle Munoz, Polina Shpilker, Michael Kotlik, Nandita Subbiah, Andrew Wishart, Yifan Peng, Miles A. Miller, Lenore Cowen, Madeleine J. Oudin
Software Mentions: 2
Published: over 4 years ago

10.3390/biom9090455

Heteroplasmic Variants of Mitochondrial DNA in Atherosclerotic Lesions of Human Aortic Intima
Cited by: 10
Author(s): Igor A. Sobenin, Andrey V. Zhelankin, Zukhra B. Khasanova, Vasily V. Sinyov, Lyudmila V Medvedeva, Maria O. Sagaidak, Vsevolod J. Makeev, Кира Ивановна Колмычкова, Anna Smirnova Henriques, Vasily N. Sukhorukov, Anton Y. Postnov, Andrey V. Grechko, Alexander N. Orekhov
Software Mentions: 2
Published: about 5 years ago

10.1111/acel.13100

The lipid elongation enzyme ELOVL2 is a molecular regulator of aging in the retina
Cited by: 58
Author(s): Daniel Chen, Daniel L. Chao, Lorena Rocha, Matthew J. Kolar, Viet Anh Nguyen Huu, Michał Krawczyk, Manish Dasyani, Tina Wang, Maryam Jafari, Mary Jabari, Kevin D. Ross, Alan Saghatelian, Bruce A. Hamilton, Kang Zhang, Dorota Skowronska‐Krawczyk
Software Mentions: 2
Published: almost 5 years ago

10.1186/s12913-021-06748-y

A pilot study of patient satisfaction with a self-completed tablet-based digital questionnaire for collecting the patient’s medical history in an emergency department
Cited by: 5
Author(s): Leander Melms, Juergen R. Schaefer, Andreas Jerrentrup, Tobias Mueller
Software Mentions: 2
Published: over 3 years ago

10.7554/eLife.42549

Circular synthesized CRISPR/Cas gRNAs for functional interrogations in the coding and noncoding genome
Cited by: 32
Author(s): Martin Wegner, Valentina Diehl, Verena Bittl, Rahel de Bruyn, Svenja Wiechmann, Yves Matthess, Marie Hebel, Michael Hayes, Simone Schaubeck, Chris Benner, Sven Heinz, Anja Bremm, Ivan Đikić, Andreas Ernst, Manuel Kaulich
Software Mentions: 2
Published: over 5 years ago

10.3390/genes8110308

Gene Regulatory Network Rewiring in the Immune Cells Associated with Cancer
Cited by: 13
Author(s): Ping Han, Chandrasekhar Gopalakrishnan, Hao Yu, Edwin Wang
Software Mentions: 2
Published: about 7 years ago

10.3389/fimmu.2021.629193

SARS-CoV-2 Causes a Different Cytokine Response Compared to Other Cytokine Storm-Causing Respiratory Viruses in Severely Ill Patients
Cited by: 85
Author(s): Márton Ölbei, Isabelle Hautefort, Dezső Módos, Agatha Treveil, Martina Poletti, Lejla Gul, Claire Shannon-Lowe, Tamás Korcsmáros
Software Mentions: 2
Published: over 3 years ago

10.3389/fbioe.2020.00513

Metabolic Engineering Strategies in Diatoms Reveal Unique Phenotypes and Genetic Configurations With Implications for Algal Genetics and Synthetic Biology
Cited by: 24
Author(s): Jestin George, Tim Kahlke, Raffaela M. Abbriano, Unnikrishnan Kuzhiumparambil, Peter J. Ralph, Michele Fabris
Software Mentions: 2
Published: over 4 years ago

10.1186/s13059-021-02459-z

Absent from DNA and protein: genomic characterization of nullomers and nullpeptides across functional categories and evolution
Cited by: 8
Author(s): Ilias Georgakopoulos-Soares, Ofer Yizhar-Barnea, Ioannis Mouratidis, Martin Hemberg, Nadav Ahituv
Software Mentions: 2
Published: about 3 years ago

10.1186/s13073-019-0654-6

Evolving neoantigen profiles in colorectal cancers with DNA repair defects
Cited by: 36
Author(s): Giuseppe Rospo, Annalisa Lorenzato, Nabil Amirouchene-Angelozzi, Alessandro Magrì, Carlotta Cancelliere, Giorgio Corti, Carola Negrino, Vito Amodio, Monica Montone, Alice Bartolini, Ludovic Barault, Luca Novara, Claudio Isella, Enzo Medico, Andrea Bertotti, Livio Trusolino, Giovanni Germano, Federica Di Nicolantonio, Alberto Bardelli
Software Mentions: 2
Published: over 5 years ago

10.1007/s00040-017-0542-2

Neotropical ant-plant Triplaris americana attracts Pseudomyrmex mordax ant queens during seedling stages
Cited by: 6
Author(s): María Fernanda Torres, Adriana Sánchez
Software Mentions: 2
Published: almost 8 years ago

10.1186/s13321-021-00492-5

Structure‐based identification of dual ligands at the A2AR and PDE10A with anti‐proliferative effects in lung cancer cell‐lines
Cited by: 1
Author(s): Leen Kalash, Ian J. Winfield, Dewi Safitri, Marcel Bermudez, Sabrina do Espirito Santo Carvalho, Robert C. Glen, Graham Ladds, Andreas Bender
Software Mentions: 1
Published: over 3 years ago

10.1186/s12864-020-06920-4

Causal mutations from adaptive laboratory evolution are outlined by multiple scales of genome annotations and condition-specificity
Cited by: 22
Author(s): Patrick V. Phaneuf, James T. Yurkovich, David Heckmann, Muyao Wu, Troy E. Sandberg, Zachary A. King, Jiaying Tan, Bernhard Ø. Palsson, Adam M. Feist
Software Mentions: 1
Published: over 4 years ago

10.1038/s41598-018-33215-2

Using Drosophila behavioral assays to characterize terebrid venom-peptide bioactivity
Cited by: 7
Author(s): Anders Eriksson, Prachi Anand, Juliette Gorson, Corina Grijuc, Elina Hadelia, James Stewart, Mandë Holford, Adam Claridge‐Chang
Software Mentions: 1
Published: about 6 years ago

10.1371/journal.pone.0185750

Automatic crack detection method for loaded coal in vibration failure process
Cited by: 7
Author(s): Chengwu Li, Dihao Ai
Software Mentions: 1
Published: about 7 years ago

10.3390/e23010006

Computing Integrated Information (Φ) in Discrete Dynamical Systems with Multi-Valued Elements
Cited by: 11
Author(s): Juan David Gómez, William G. P. Mayner, M. Beheler-Amass, Giulio Tononi, Larissa Albantakis
Software Mentions: 1
Published: almost 4 years ago

10.3390/ma11061007

Three Dimensional Methodology to Characterize Large Dendritic Equiaxed Grains in Industrial Steel Ingots
Cited by: 9
Author(s): Marvin Gennesson, Julien Zollinger, D. Daloz, Bernard Rouat, Joëlle Demurger, Hervé Combeau
Software Mentions: 1
Published: over 6 years ago

10.1038/s41396-019-0430-z

Defining lower limits of biodegradation: atrazine degradation regulated by mass transfer and maintenance demand in Arthrobacter aurescens TC1
Cited by: 40
Author(s): Kalipada Kundu, Sviatlana Marozava, Benno N. Ehrl, Juliane Merl-Pham, Christian Griebler, Martin Elsner
Software Mentions: 1
Published: over 5 years ago

10.1186/s13053-019-0130-8

Recommended care and care adherence following a diagnosis of Lynch syndrome: a mixed-methods study
Cited by: 12
Author(s): Kathleen F. Mittendorf, Jessica Ezzell Hunter, Jennifer L. Schneider, Elizabeth Shuster, Alan F. Rope, Jamilyn Zepp, Marian J. Gilmore, Kristin R. Muessig, James V. Davis, Tia L. Kauffman, Kellene M. Bergen, Georgia L. Wiesner, Louise S. Acheson, Susan K. Peterson, Sapna Syngal, Jacob A. Reiss, Katrina A.B. Goddard
Software Mentions: 1
Published: almost 5 years ago

10.1007/s10162-016-0608-2

A Model of Electrically Stimulated Auditory Nerve Fiber Responses with Peripheral and Central Sites of Spike Generation
Cited by: 35
Author(s): Suyash Narendra Joshi, Torsten Dau, Bastian Epp
Software Mentions: 1
Published: almost 8 years ago

10.7554/eLife.61393

Biochemical patterns of antibody polyreactivity revealed through a bioinformatics-based analysis of CDR loops
Cited by: 23
Author(s): Christopher T. Boughter, Marta Borowska, Jenna J. Guthmiller, Albert Bendelac, Patrick C. Wilson, Benoît Roux, Erin J. Adams
Software Mentions: 1
Published: about 4 years ago

10.1016/j.isci.2021.102559

Neural tube patterning: From a minimal model for rostrocaudal patterning toward an integrated 3D model
Cited by: 1
Author(s): Max Brambach, Ariane Ernst, Sara Nolbrant, Janelle Drouin‐Ouellet, Agnete Kirkeby, Malin Parmar, Victor Olariu
Software Mentions: 1
Published: over 3 years ago

10.1039/c5sc03340c

Time-resolved proteomic analysis of quorum sensing in Vibrio harveyi
Cited by: 24
Author(s): John D. Bagert, Julia C. van Kessel, Michael J. Sweredoski, Lihui Feng, Sonja Hess, Bonnie L. Bassler, David A. Tirrell
Software Mentions: 1
Published: almost 9 years ago

10.3390/v13071354

Mathematical Modelling of the Molecular Mechanisms of Interaction of Tenofovir with Emtricitabine against HIV
Cited by: 2
Author(s): Sara Iannuzzi, Max von Kleist
Software Mentions: 1
Published: over 3 years ago

10.1016/j.epidem.2018.05.009

Kernel-density estimation and approximate Bayesian computation for flexible epidemiological model fitting in Python
Cited by: 6
Author(s): Michael A. Irvine, T. Déirdre Hollingsworth
Software Mentions: 1
Published: almost 6 years ago

10.1038/s41598-021-86460-3

Predicting the membrane permeability of organic fluorescent probes by the deep neural network based lipophilicity descriptor DeepFl-LogP
Cited by: 21
Author(s): Kareem Soliman, Florian Grimm, Christian A. Wurm, Alexander Egner
Software Mentions: 1
Published: over 3 years ago

Projects: pypi: seaborn

Papers Mentioning seaborn 283