Projects: pypi: scikit-learn
https://packages.ecosyste.ms/registries/pypi.org/packages/scikit-learn
A set of python modules for machine learning and data mining
72 versions
Latest release: about 2 years ago
5,918 dependent packages
43,777,417 downloads last month
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a.joly@ulg.ac.be
vanderplas@astro.washington.edu
bh00038@cvplws63.eps.surrey.ac.uk
ha258@cornell.edu
satra@mit.edu
zl2480@columbia.edu
pinto@alum.mit.edu
jz4721@nyu.edu
matteo.visconti.gr@dartmouth.edu
vighneshbirodkar@nyu.edu
robert.l.marchman@dartmouth.edu
rs2715@stern.nyu.edu
claire.savard@colorado.edu
aaaagrawal@iitb.ac.in
ihaque@cs.stanford.edu
rspeer@mit.edu
mluessi@nmr.mgh.harvard.edu
amitibo@tx.technion.ac.il
ericchang2017@u.northwestern.edu
jkarno@seas.upenn.edu
minghui.liu@trincoll.edu
m.lyra@sussex.ac.uk
andrew.knyazev@ucdenver.edu
lamb@cs.stanford.edu
camilo@neurostat.mit.edu
martino.sorbaro@ed.ac.uk
t.sheerman-chase@surrey.ac.uk
cgohlke@uci.edu
batulaa@drexel.edu
kcarnold@alum.mit.edu
apw@seas.harvard.edu
abie@alum.mit.edu
rossbar@berkeley.edu
alceballosa@unal.edu.co
fhoang7@berkeley.edu
hechen@seas.upenn.edu
stefan@sun.ac.za
deepyaman.datta@utexas.edu
rebekah.kim@columbia.edu
shubham.bhardwaj2015@vit.ac.in
slama@berkeley.edu
nisingh@wharton.upenn.edu
kanikas3@vt.edu
jdlabal@stanford.edu
kjells@uw.edu
markus.loning.17@ucl.ac.uk
k_nzw@klis.tsukuba.ac.jp
dkirkby@uci.edu
balawson@bu.edu
c.brummitt@columbia.edu
choo8@illinois.edu
giorgio.patrini@anu.edu.au
shangwuy@andrew.cmu.edu
rafael.possas@sydney.edu.au
olsonran@msu.edu
brian.mcfee@nyu.edu
naj273@nyu.edu
dgrusak@trinity.edu
emd222@cornell.edu
voth0@sewanee.edu
trishnendu.dd2014@cs.iiests.ac.in
apeng@berkeley.edu
boucher@cs.umass.edu
lunt@ctbp.ucsd.edu
bakhbari@mgh.harvard.edu
piraka@brandeis.edu
neal.lathia@cl.cam.ac.uk
razhoshia@post.bgu.ac.il
michal.romaniuk06@ic.ac.uk
m.batchkarov@sussex.ac.uk
lemin@cs.colostate.edu
rudvlf0413@korea.ac.kr
vredev16@msu.edu
raschkas@msu.edu
ali.baharev@univie.ac.at
a.krasoulis@sms.ed.ac.uk
arokem@berkeley.edu
gabrielvr@al.insper.edu.br
eric.sanchez1234@email.bakersfieldcollege.edu
fcchou@stanford.edu
rofuyu@cs.utexas.edu
glemaitre@visor.udg.edu
naoyaiijima@hiroshima-u.ac.jp
ayushgup@iitk.ac.in
joel@vlan-2666-10-17-16-173.staff.wireless.sydney.edu.au
jam7w2@mail.missouri.edu
j.hale09@imperial.ac.uk
tw991@nyu.edu
patel_zeel@iitgn.ac.in
vincent.lostanlen@nyu.edu
stvjc@channing.harvard.edu
ritchieng@u.nus.edu
bansalsi@usc.edu
rbarnes@umn.edu
rrohan@cs.cmu.edu
liutong.zhou@columbia.edu
mdh386@nyu.edu
mlf419@nyu.edu
shreyave@usc.edu
jin.siy@northeastern.edu
samuel_ainsworth@brown.edu
cwijes1@lsu.edu
wadawson@ucdavis.edu
xinyuliu@umich.edu
rz258@cornell.edu
daniel.mallia21@myhunter.cuny.edu
argriffi@ncsu.edu
filipj@umich.edu
kms15@case.edu
sam.dixon@berkeley.edu
khong008@e.ntu.edu.sg
jnelso11@gmu.edu
jclawton@umich.edu
jaehyunahn@sogang.ac.kr
ijpulidos@unal.edu.co
gstupp@scripps.edu
justhube@umich.edu
noamkeidar@campus.technion.ac.il
nityamd@nyu.edu
css459@nyu.edu
alyee@ucsd.edu
andersk@mit.edu
dhanus@mit.edu
coreylevinson@uchicago.edu
cailean.carter@quadram.ac.uk
bral4884@colorado.edu
dschult@colgate.edu
dpwe@ee.columbia.edu
dylan.cashman@tufts.edu
pawelsendyk@berkeley.edu
qzhang90@gatech.edu
mhaberla@calpoly.edu
saketk@student.unimelb.edu.au
eunjikim@dm.snu.ac.kr
erinrhof@uw.edu
ksivaman@purdue.edu
garmstrong@ucsd.edu
konstantin.shmelkov@polytechnique.edu
e175774@ie.u-ryukyu.ac.jp
hermidal@cs.umd.edu
jbearer@hmc.edu
jmarin@csail.mit.edu
Repository Activity:
Repository Owner:
scikit-learn (organization)
Repositories related to the scikit-learn Python machine learning library. Academic
Repositories related to the scikit-learn Python machine learning library. Academic
README Analysis:
Science Score: 100/100
Starting Score: 100 points
Bonuses:
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+2840
Educational commit emails
142 contributors with educational email addresses -
+20
Academic repository owner
Repository owned by academic institution -
+15
Institutional repository owner
Repository owned by research institution -
+6
Science terms in README
3 scientific terms found in README
Penalties:
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PyPI ecosystem
General-purpose ecosystem
Very Likely Science (100)
Papers Mentioning scikit-learn 2,431
10.1186/s12885-021-08276-8
Differential gene expression identifies a transcriptional regulatory network involving ER-alpha and PITX1 in invasive epithelial ovarian cancerCited by: 6
Author(s): Yichao Li, Sushila Jaiswal, Rupleen Kaur, Dana Alsaadi, Xiaoyu Liang, Frank A. Drews, Julie A. DeLoia, Thomas C. Krivak, Hanna M. Petrykowska, Valer Gotea, Lonnie R. Welch, Laura Elnitski
Software Mentions: 3
Published: over 4 years ago
10.3390/foods9060710
Application of ATR-FT-MIR for Tracing the Geographical Origin of Honey Produced in the Maltese IslandsCited by: 11
Author(s): Jean Paul Formosa, Frederick Lia, David Mifsud, Claude Farrugia
Software Mentions: 3
Published: over 5 years ago
10.7554/eLife.52707
The transcriptomic response of cells to a drug combination is more than the sum of the responses to the monotherapiesCited by: 19
Author(s): Jennifer E. L. Diaz, Mehmet Eren Ahsen, Thomas Schaffter, Xintong Chen, Ronald Realubit, Charles Karan, Andrea Califano, Bojan Losic, Gustavo Stolovitzky
Software Mentions: 3
Published: about 5 years ago
10.2196/medinform.8960
Characterizing and Managing Missing Structured Data in Electronic Health Records: Data AnalysisCited by: 100
Author(s): Brett K. Beaulieu‐Jones, Daniel R. Lavage, John W Snyder, Jason H. Moore, Sarah A. Pendergrass, Christopher R. Bauer
Software Mentions: 3
Published: over 7 years ago
10.2196/20324
Institution-Specific Machine Learning Models for Prehospital Assessment to Predict Hospital Admission: Prediction Model Development StudyCited by: 10
Author(s): Toru Shirakawa, Tomohiro Sonoo, Kentaro Ogura, Ryo Fujimori, Kozo Hara, Tadahiro Goto, Hideki Hashimoto, Yūji Takahashi, Hiromu Naraba, Kensuke Nakamura
Software Mentions: 3
Published: about 5 years ago
10.2196/30115
Predicting Writing Styles of Web-Based Materials for Children’s Health Education Using the Selection of Semantic Features: Machine Learning ApproachCited by: 1
Author(s): Wenxiu Xie, Meng Ji, Yanmeng Liu, Tianyong Hao, Chee W. Chow
Software Mentions: 3
Published: over 4 years ago
10.3390/biom11030471
Deep Learning for Novel Antimicrobial Peptide DesignCited by: 33
Author(s): Christina Wang, Sam Garlick, Mire Zloh
Software Mentions: 3
Published: over 4 years ago
10.3390/jfmk6030060
Accuracy of Measuring Knee Flexion after TKA through Wearable IMU SensorsCited by: 4
Author(s): Ricardo Antunes, Paul Jacob, Andrew J. Meyer, Michael A. Conditt, Martin W. Roche, Matthias Verstraete
Software Mentions: 3
Published: over 4 years ago
10.1007/s00330-020-07635-6
Radiomics score predicts acute respiratory distress syndrome based on the initial CT scan after traumaCited by: 9
Author(s): Sebastian Röhrich, Johannes Hofmanninger, Lukas Leopold Negrin, Georg Langs, Helmut Prosch
Software Mentions: 3
Published: over 4 years ago
10.3389/fncom.2019.00075
Extracting Reproducible Time-Resolved Resting State Networks Using Dynamic Mode DecompositionCited by: 25
Author(s): James Kunert-Graf, Kristian Eschenburg, David J. Galas, J. Nathan Kutz, Swati Rane, Bingni W. Brunton
Software Mentions: 3
Published: about 6 years ago
10.3390/jimaging6110115
Detecting Morphing Attacks through Face Geometry FeaturesCited by: 8
Author(s): Stephanie Autherith, Cecilia Pasquini
Software Mentions: 3
Published: about 5 years ago
10.7554/eLife.46935
Deep generative models for T cell receptor protein sequencesCited by: 57
Author(s): Kristian Davidsen, Branden J Olson, William S DeWitt, Jean Feng, Elias Harkins, Philip Bradley, F. A. Matsen
Software Mentions: 3
Published: about 6 years ago
10.1371/journal.pntd.0008275
Prediction pipeline for discovery of regulatory motifs associated with Brugia malayi moltingCited by: 32
Author(s): Alexandra Grote, Yichao Li, Canhui Liu, Denis Voronin, Adam Geber, Sara Lustigman, Thomas R. Unnasch, Elodie Ghedin
Software Mentions: 3
Published: over 5 years ago
10.3390/e23060664
Shall I Work with Them? A Knowledge Graph-Based Approach for Predicting Future Research CollaborationsCited by: 4
Author(s): Nikos Kanakaris, Nikolaos Giarelis, Ilias Siachos, Nikos Karacapilidis
Software Mentions: 3
Published: over 4 years ago
10.1371/journal.pgen.1005658
Variation in Rural African Gut Microbiota Is Strongly Correlated with Colonization by Entamoeba and SubsistenceCited by: 163
Author(s): Elise R. Morton, Joshua Lynch, Alain Froment, Sophie Lafosse, Évelyne Heyer, Molly Przeworski, Ran Blekhman, Laure Ségurel
Software Mentions: 3
Published: almost 10 years ago
10.1371/journal.pgen.1009087
Quantitative analysis questions the role of MeCP2 as a global regulator of alternative splicingCited by: 9
Author(s): Kashyap Chhatbar, Justyna Cholewa-Waclaw, Ruth Shah, Adrian Bird, Guido Sanguinetti
Software Mentions: 3
Published: about 5 years ago
10.3390/e21070654
Sequence Versus Composition: What Prescribes IDP Biophysical Properties?Cited by: 10
Author(s): Jiří Vymětal, Jiřı́ Vondrášek, Klára Hlouchová
Software Mentions: 3
Published: over 6 years ago
10.3390/s20174773
ANN-Based Estimation of Low-Latitude Monthly Ocean Latent Heat Flux by Ensemble Satellite and Reanalysis ProductsCited by: 3
Author(s): Xiao‐Wei Chen, Yunjun Yao, Yufu Li, Yuhu Zhang, Kun Jia, Xiaolin Zhang, Ke Shang, Junming Yang, Xiangyi Bei, Xihong Guo
Software Mentions: 3
Published: about 5 years ago
10.1371/journal.pcbi.1008007
Nine quick tips for efficient bioinformatics curriculum development and trainingCited by: 3
Author(s): Susan McClatchy, Kristin M. Bass, Daniel M. Gatti, Adam Moylan, Gary A. Churchill
Software Mentions: 3
Published: over 5 years ago
10.1155/2021/6633563
Shared Molecular Mechanisms between Alzheimer’s Disease and Periodontitis Revealed by Transcriptomic AnalysisCited by: 10
Author(s): Jieqi Jin, Mengkai Guang, Anthony Chukwunonso Ogbuehi, Simin Li, Kai Zhang, Yihong Ma, Aneesha Acharya, Bihan Guo, Zongwu Peng, Xiangqiong Liu, Yupei Deng, Ziyu Fang, Xiongjie Zhu, Shiting Hua, Cong Liu, Rainer Haak, Dirk Ziebolz, Gerhard Schmalz, Lei Liu, Baohua Xu, Xiaofeng Huang
Software Mentions: 3
Published: over 4 years ago
10.3390/s20092451
LogEvent2vec: LogEvent-to-Vector Based Anomaly Detection for Large-Scale Logs in Internet of ThingsCited by: 53
Author(s): Jin Wang, Yangning Tang, Shiming He, Changqing Zhao, Pradip Kumar Sharma, Osama Alfarraj, Amr Tolba
Software Mentions: 3
Published: over 5 years ago
10.3390/s20082403
Analyzing the Effectiveness of the Brain–Computer Interface for Task Discerning Based on Machine LearningCited by: 3
Author(s): Jakub Browarczyk, Adam Kurowski, Bożena Kostek
Software Mentions: 3
Published: over 5 years ago
10.1371/journal.pcbi.1003842
IDEPI: Rapid Prediction of HIV-1 Antibody Epitopes and Other Phenotypic Features from Sequence Data Using a Flexible Machine Learning PlatformCited by: 25
Author(s): N. Lance Hepler, Konrad Scheffler, Steven Weaver, Ben Murrell, Douglas D. Richman, Dennis R. Burton, Pascal Poignard, Davey M. Smith, Sergei L. Kosakovsky Pond
Software Mentions: 3
Published: about 11 years ago
10.3390/s20030825
Zero-Shot Human Activity Recognition Using Non-Visual SensorsCited by: 23
Author(s): Fadi Al Machot, Mohammed R. Elkobaisi, Kyandoghere Kyamakya
Software Mentions: 3
Published: almost 6 years ago
10.3390/s20102809
Data-Driven Cervical Cancer Prediction Model with Outlier Detection and Over-Sampling MethodsCited by: 152
Author(s): Muhammad Fazal Ijaz, Muhammad Attique, Youngdoo Son
Software Mentions: 3
Published: over 5 years ago
10.3390/s18113779
Machine Learning Aided Scheme for Load Balancing in Dense IoT NetworksCited by: 29
Author(s): César Gómez, Abdallah Shami, Xianbin Wang
Software Mentions: 3
Published: about 7 years ago
10.3390/s19071738
Fear Level Classification Based on Emotional Dimensions and Machine Learning TechniquesCited by: 46
Author(s): Oana Bălan, Gabriela Moise, Alin Moldoveanu, Marius Leordeanu, Florica Moldoveanu
Software Mentions: 3
Published: over 6 years ago
10.1155/2019/9056402
Predicting Long-Term Mortality after Acute Coronary Syndrome Using Machine Learning Techniques and Hematological MarkersCited by: 25
Author(s): Konrad Pieszko, Jarosław Hiczkiewicz, Paweł Budzianowski, Jan Budzianowski, Janusz Rzeźniczak, Karolina Pieszko, Paweł Burchardt
Software Mentions: 3
Published: almost 7 years ago
10.1371/journal.pcbi.1004572
Wham: Identifying Structural Variants of Biological ConsequenceCited by: 98
Author(s): Zev Kronenberg, Edward J. Osborne, Kelsey R. Cone, Brett Kennedy, Eric T. Domyan, Michael D. Shapiro, Nels C. Elde, Mark Yandell
Software Mentions: 3
Published: almost 10 years ago
10.3390/s19071629
Acoustic Sensor Data Flow for Cultural Heritage Monitoring and SafeguardingCited by: 7
Author(s): Panagiotis Kasnesis, Nicolas-Alexander Tatlas, Stelios Α. Mitilineos, Charalampos Z. Patrikakis, Stelios M. Potirakis
Software Mentions: 3
Published: over 6 years ago
10.1038/s41388-020-01614-3
Comprehensive characterisation of intronic mis-splicing mutations in human cancersCited by: 20
Author(s): Hyunchul Jung, Kang Seon Lee, Jung Kyoon Choi
Software Mentions: 3
Published: almost 5 years ago
10.3390/diagnostics11081398
Colon Tissues Classification and Localization in Whole Slide Images Using Deep LearningCited by: 12
Author(s): Pushpanjali Gupta, Yen‐Lin Huang, Prasan Kumar Sahoo, Jeng-Fu You, Sum-Fu Chiang, Djeane Debora Onthoni, Yih‐Jong Chern, Kuo-Yu Chao, Jy-Ming Chiang, Chien-Yuh Yeh, Wen‐Sy Tsai
Software Mentions: 3
Published: over 4 years ago
10.3390/s18082474
Detection of Talking in Respiratory Signals: A Feasibility Study Using Machine Learning and Wearable Textile-Based SensorsCited by: 21
Author(s): Andreas Ejupi, Carlo Menon
Software Mentions: 3
Published: over 7 years ago
10.3390/s18113743
Characterizing Focused Attention and Working Memory Using EEGCited by: 35
Author(s): Zainab Mohamed, Mohamed El Halaby, Tamer Said, Doaa M. Shawky, Ashraf H. Badawi
Software Mentions: 3
Published: about 7 years ago
10.3390/s19081955
Streaming Data Fusion for the Internet of ThingsCited by: 28
Author(s): Klemen Kenda, Blaž Kažič, Erik Novak, Dunja Mladenič
Software Mentions: 3
Published: over 6 years ago
10.1186/s12859-017-1769-7
Assessing the model transferability for prediction of transcription factor binding sites based on chromatin accessibilityCited by: 21
Author(s): Sheng Liu, Cristina Zibetti, Jun Wan, Guohua Wang, Seth Blackshaw, Jiang Qian
Software Mentions: 3
Published: over 8 years ago
10.3390/diagnostics11030574
Use of Machine Learning to Investigate the Quantitative Checklist for Autism in Toddlers (Q-CHAT) towards Early Autism ScreeningCited by: 8
Author(s): Gennaro Tartarisco, Giovanni Cicceri, Davide Di Pietro, Elisa Leonardi, Stefania Aiello, Flavia Marino, Flavia Chiarotti, Antonella Gagliano, Giuseppe Maurizio Arduino, Fabio Apicella, Filippo Muratori, Dario Bruneo, Carrie Allison, Simon Baron Cohen, David Vagni, Giovanni Pioggia, Liliana Ruta
Software Mentions: 3
Published: over 4 years ago
10.1038/s41598-021-98387-w
Predicting medication adherence using ensemble learning and deep learning models with large scale healthcare dataCited by: 14
Author(s): Yingqi Gu, Akshay Zalkikar, Mingming Liu, Lara Kelly, Amy R. Hall, Kieran Daly, Tomás E. Ward
Software Mentions: 3
Published: about 4 years ago
10.1038/s41598-021-95702-3
Geographic source estimation using airborne plant environmental DNA in dustCited by: 10
Author(s): Chelsea Lennartz, Joel Kurucar, Stephen Coppola, Janice Crager, Johanna Bobrow, Laura Bortolin, James C. Comolli
Software Mentions: 3
Published: about 4 years ago
10.1038/s41598-021-96674-0
Exploring deep learning capabilities for surge predictions in coastal areasCited by: 19
Author(s): Timothy Tiggeloven, Anaïs Couasnon, Chiem van Straaten, Sanne Muis, Philip J. Ward
Software Mentions: 3
Published: about 4 years ago
10.1186/s13062-018-0223-8
Predicting clinical outcomes in neuroblastoma with genomic data integrationCited by: 9
Author(s): Ilyes Baali, Durmus Alp Emre Acar, Tunde Aderinwale, Saber Hafezqorani, Hilal Kazan
Software Mentions: 3
Published: about 7 years ago
10.1038/s41598-021-97007-x
Delivery mode and perinatal antibiotics influence the predicted metabolic pathways of the gut microbiomeCited by: 7
Author(s): Petri Vänni, Mysore V. Tejesvi, Sofia Ainonen, Marjo Renko, Katja Korpela, Jarmo A. Salo, Niko Paalanne, Terhi Tapiainen
Software Mentions: 3
Published: about 4 years ago
10.1371/journal.pcbi.1009426
Machine learning approach for automatic recognition of tomato-pollinating bees based on their buzzing-soundsCited by: 9
Author(s): Alison Ribeiro, Nádia Félix Felipe da Silva, Fernanda Neiva Mesquita, Priscila de Cássia Souza Araújo, Thierson Couto Rosa, José Neiva Mesquita Neto
Software Mentions: 3
Published: about 4 years ago
10.1186/s13062-019-0249-6
A novel framework for horizontal and vertical data integration in cancer studies with application to survival time prediction modelsCited by: 33
Author(s): Iliyan Mihaylov, Maciej M. Kańduła, Milko Krachunov, Dimitar Vassilev
Software Mentions: 3
Published: almost 6 years ago
10.3390/antibiotics9080447
Characterization of Clinical MRSA Isolates from Northern Spain and Assessment of Their Susceptibility to Phage-Derived AntimicrobialsCited by: 11
Author(s): Marina Salas, Maciej Wernecki, Lucía Fernández, Beatriz Menéndez Iglesias, Diana Gutiérrez, Azucena L. Alvarez, Laura García, Elisabeth Prieto, Pilar Garcı́a, Ana Rodrı́guez
Software Mentions: 3
Published: over 5 years ago
10.1038/s41598-019-53751-9
Neurophysiological Correlates of Concussion: Deep Learning for Clinical AssessmentCited by: 16
Author(s): Rober Boshra, Kyle I. Ruiter, Carol DeMatteo, J.P. Reilly, John F. Connolly
Software Mentions: 3
Published: almost 6 years ago
10.1371/journal.pone.0234003
Inferring transportation mode from smartphone sensors: Evaluating the potential of Wi-Fi and BluetoothCited by: 8
Author(s): Andreas Bjerre-Nielsen, Kelton Minor, Piotr Sapieżyński, Sune Lehmann, David Dreyer Lassen
Software Mentions: 3
Published: over 5 years ago
10.1038/s41598-021-97257-9
Microglial ASD-related genes are involved in oligodendrocyte differentiationCited by: 4
Author(s): Yuta Takanezawa, Shihori Tanabe, Daiki Kato, Rie Ozeki, Masayo Komoda, Tatsunori Suzuki, Hiroko Baba, Rieko Muramatsu
Software Mentions: 3
Published: about 4 years ago
10.1371/journal.pcbi.1008050
Cross-species regulatory sequence activity predictionCited by: 89
Author(s): David R. Kelley
Software Mentions: 3
Published: over 5 years ago
10.1186/s12859-016-1309-x
On the inconsistency of ℓ 1-penalised sparse precision matrix estimationCited by: 7
Author(s): Otte Heinävaara, Janne Leppä-aho, Jukka Corander, Antti Honkela
Software Mentions: 3
Published: almost 9 years ago
10.1186/s13062-020-00285-0
Prediction and mechanistic analysis of drug-induced liver injury (DILI) based on chemical structureCited by: 25
Author(s): Anika Liu, Moritz Walter, Peter M. Wright, Aleksandra Bartosik, Daniela Dolciami, Abdurrahman Elbasir, Hong-Chang Yang, Andreas Bender
Software Mentions: 3
Published: almost 5 years ago
10.1093/database/bax009
HopBase: a unified resource for Humulus genomicsCited by: 27
Author(s): Steven T. Hill, Ramcharan Sudarsanam, Jimmy C. Henning, David A. Hendrix
Software Mentions: 3
Published: almost 9 years ago
10.1186/s13062-020-00290-3
A novel gene selection method for gene expression data for the task of cancer type classificationCited by: 6
Author(s): N. Özlem Özcan Şimşek, Arzucan Özgür, Fikret Gürgen
Software Mentions: 3
Published: over 4 years ago
10.1038/s41598-019-48872-0
Multi-study reanalysis of 2,213 acute myeloid leukemia patients reveals age- and sex-dependent gene expression signaturesCited by: 12
Author(s): Raeuf Roushangar, George I. Mias
Software Mentions: 3
Published: about 6 years ago
10.1186/s13062-019-0257-6
Diverse approaches to predicting drug-induced liver injury using gene-expression profilesCited by: 18
Author(s): G Rex Sumsion, Michael S. Bradshaw, Jeremy Beales, Emi Ford, Griffin R. G. Caryotakis, Daniel J. Garrett, Emily D. LeBaron, Ifeanyichukwu O. Nwosu, Stephen R. Piccolo
Software Mentions: 3
Published: almost 6 years ago
10.1038/s41598-019-43587-8
Predicting the decision making chemicals used for bacterial growthCited by: 14
Author(s): Kazuha Ashino, Kenta Sugano, Toshiyuki Amagasa, Bei‐Wen Ying
Software Mentions: 3
Published: over 6 years ago
10.1038/s41598-019-41345-4
Single-trial classification of awareness state during anesthesia by measuring critical dynamics of global brain activityCited by: 17
Author(s): Leandro M. Alonso, Guillermo Solovey, Toru Yanagawa, Alex Proekt, Guillermo A. Cecchi, Marcelo O. Magnasco
Software Mentions: 3
Published: over 6 years ago
10.1093/bioinformatics/btaa711
A semi-supervised learning framework for quantitative structure–activity regression modellingCited by: 5
Author(s): Oliver P. Watson, Isidro Cortés-Ciriano, James A Watson
Software Mentions: 3
Published: about 5 years ago
10.1038/s41598-019-44839-3
Deep Learning for the Radiographic Detection of Periodontal Bone LossCited by: 199
Author(s): Joachim Krois, Thomas Ekert, Leonie Meinhold, Tatiana Golla, Basel Kharbot, Agnes Wittemeier, Christof E. Dörfer, Falk Schwendicke
Software Mentions: 3
Published: over 6 years ago
10.1242/dev.199459
Anterior expansion and posterior addition to the notochord mechanically coordinate zebrafish embryo axis elongationCited by: 10
Author(s): Susannah B. P. McLaren, Benjamin Steventon
Software Mentions: 3
Published: over 4 years ago
10.1107/S1399004715000383
<i>Brickworx</i>builds recurrent RNA and DNA structural motifs into medium- and low-resolution electron-density mapsCited by: 8
Author(s): Grzegorz Chojnowski, Tomasz Waleń, Paweł Piątkowski, Wojciech Potrzebowski, Janusz M. Bujnicki
Software Mentions: 3
Published: over 10 years ago
10.1371/journal.pcbi.1006628
Performance of convolutional neural networks for identification of bacteria in 3D microscopy datasetsCited by: 46
Author(s): Edouard A. Hay, Raghuveer Parthasarathy
Software Mentions: 3
Published: almost 7 years ago
10.1371/journal.pcbi.1009448
dGPredictor: Automated fragmentation method for metabolic reaction free energy prediction and de novo pathway designCited by: 4
Author(s): Lin Wang, Vikas Upadhyay, Costas D. Maranas
Software Mentions: 3
Published: about 4 years ago
10.1093/bioinformatics/btaa578
Solubility-Weighted Index: fast and accurate prediction of protein solubilityCited by: 33
Author(s): Bikash K. Bhandari, Paul P. Gardner, Chun Shen Lim
Software Mentions: 3
Published: over 5 years ago
10.1038/s41598-019-47493-x
Strategies and limitations in app usage and human mobilityCited by: 24
Author(s): Marco De Nadai, Ângelo Cardoso, Antonio Lima, Bruno Lepri, Núria Oliver
Software Mentions: 3
Published: over 6 years ago
10.1155/2015/193406
Genetic Programming Based Ensemble System for Microarray Data ClassificationCited by: 17
Author(s): Kun Hong Liu, Muchenxuan Tong, Shu Tong Xie, Vincent Ng
Software Mentions: 3
Published: almost 11 years ago
10.1186/s12859-021-04370-7
Deep GONet: self-explainable deep neural network based on Gene Ontology for phenotype prediction from gene expression dataCited by: 14
Author(s): Victoria Bourgeais, Farida Zehraoui, Mohamed Ben Hamdoune, Blaise Hanczar
Software Mentions: 3
Published: over 4 years ago
10.1155/2020/6217392
Risk Factors of Cerebral Infarction and Myocardial Infarction after Carotid Endarterectomy Analyzed by Machine LearningCited by: 5
Author(s): Peng Bai, Yang Zhou, Yuan Liu, Gang Li, Zhengqian Li, Tao Wang, Xiaoru Guo
Software Mentions: 3
Published: almost 5 years ago
10.1093/bioinformatics/btaa928
BiasAway: command-line and web server to generate nucleotide composition-matched DNA background sequencesCited by: 14
Author(s): Aziz Khan, Rafael Riudavets Puig, Paul Boddie, Anthony Mathelier
Software Mentions: 3
Published: about 5 years ago
10.1186/s12859-020-03673-5
Biomedical document triage using a hierarchical attention-based capsule networkCited by: 7
Author(s): Jian Wang, Mengying Li, Qishuai Diao, Hongfei Lin, Zhihao Yang, YiJia Zhang
Software Mentions: 3
Published: about 5 years ago
10.1038/s41598-017-10697-0
Millisecond dynamics of BTK reveal kinome-wide conformational plasticity within the apo kinase domainCited by: 43
Author(s): Mohammad M. Sultan, R. Aldrin Denny, Ray Unwalla, Frank Lovering, Vijay S. Pande
Software Mentions: 3
Published: almost 8 years ago
10.1007/s40747-021-00476-w
An IoT enabled system for enhanced air quality monitoring and prediction on the edgeCited by: 26
Author(s): Ahmed Samy Abd El Aziz Moursi, Nawal El-Fishawy, Soufiene Djahel, Marwa A. Shouman
Software Mentions: 3
Published: over 4 years ago
10.1186/s40649-017-0045-3
A method for evaluating discoverability and navigability of recommendation algorithmsCited by: 4
Author(s): Daniel Lamprecht, Markus Strohmaier, Denis Helić
Software Mentions: 3
Published: about 8 years ago
10.1038/s41598-018-31924-2
3D Shape Modeling for Cell Nuclear Morphological Analysis and ClassificationCited by: 21
Author(s): Alexandr A. Kalinin, Ari Allyn-Feuer, Alex Ade, Gordon-Victor Fon, Walter Meixner, David S. Dilworth, Syed Sameed Husain, Jeffrey R. de Wet, Gerald A. Higgins, Gen Zheng, Amy L. Creekmore, John W. Wiley, James E. Verdone, Robert W. Veltri, Kenneth J. Pienta, Donald S. Coffey, Brian D. Athey, Ivo D. Dinov
Software Mentions: 3
Published: about 7 years ago
10.1371/journal.pcbi.1008549
Ten simple rules for quick and dirty scientific programmingCited by: 9
Author(s): Gabriel Balaban, Ivar Grytten, Knut Dagestad Rand, Lonneke Scheffer, Geir Kjetil Sandve
Software Mentions: 3
Published: over 4 years ago
10.1371/journal.pcbi.1007641
Realistic assumptions about spatial locations and clustering of premises matter for models of foot-and-mouth disease spread in the United StatesCited by: 2
Author(s): Stefan Sellman, Michael J. Tildesley, Christopher L. Burdett, Ryan S. Miller, Clayton Hallman, Colleen T. Webb, Uno Wennergren, Katie Portacci, Tom Lindström
Software Mentions: 3
Published: over 5 years ago
10.1038/s41598-017-09644-w
Fungal lifestyle reflected in serine protease repertoireCited by: 85
Author(s): Anna Muszewska, Marta M. Stepniewska-Dziubinska, Kamil Steczkiewicz, Julia Pawłowska, Agata Dziedzic, Krzysztof Ginalski
Software Mentions: 3
Published: about 8 years ago
10.1371/journal.pcbi.1009094
Topological data analysis distinguishes parameter regimes in the Anderson-Chaplain model of angiogenesisCited by: 12
Author(s): John T. Nardini, Bernadette J. Stolz, Kevin Flores, Heather A. Harrington, Helen M. Byrne
Software Mentions: 3
Published: over 4 years ago
10.1038/srep26556
Network Signatures of IgG Immune Repertoires in Hepatitis B Associated Chronic Infection and Vaccination ResponsesCited by: 15
Author(s): Ya-Hui Chang, Hui-Chung Kuan, Tsung‐Hsin Hsieh, K. H., Chung-Hsiang Yang, Wei‐Bin Hsu, Shih‐Feng Tsai, Anne Chao, Hong-Hsing Liu
Software Mentions: 3
Published: over 9 years ago
10.1038/s41598-017-13259-6
RIFS: a randomly restarted incremental feature selection algorithmCited by: 28
Author(s): Yuting Ye, Ruochi Zhang, Weiwei Zheng, Shuai Liu, Fengfeng Zhou
Software Mentions: 3
Published: about 8 years ago
10.1371/journal.pcbi.1007921
Signal-to-signal neural networks for improved spike estimation from calcium imaging dataCited by: 8
Author(s): Jilt Sebastian, Mriganka Sur, Hema A. Murthy, Mathew Magimai-Doss
Software Mentions: 3
Published: over 4 years ago
10.1093/bioinformatics/btx028
HIPred: an integrative approach to predicting haploinsufficient genesCited by: 30
Author(s): Hashem A. Shihab, Mark F. Rogers, Colin Campbell, Tom R. Gaunt
Software Mentions: 3
Published: almost 9 years ago
10.1038/s42003-020-01143-5
Host-parasite tissue adhesion by a secreted type of β-1,4-glucanase in the parasitic plant Phtheirospermum japonicumCited by: 26
Author(s): Ken-ichi Kurotani, Takanori Wakatake, Yasunori Ichihashi, Koji Okayasu, Yu Sawai, Satoshi Ogawa, Songkui Cui, Takamasa Suzuki, Ken Shirasu, Michitaka Notaguchi
Software Mentions: 3
Published: over 5 years ago
10.1371/journal.pcbi.1008174
Metabolic pathway inference using multi-label classification with rich pathway featuresCited by: 8
Author(s): Abdur Rahman M. A. Basher, Ryan J. McLaughlin, Steven J. Hallam
Software Mentions: 3
Published: about 5 years ago
10.1371/journal.pone.0113516
Breaking an Epigenetic Chromatin Switch: Curious Features of Hysteresis in Saccharomyces cerevisiae Telomeric SilencingCited by: 8
Author(s): Vijayalakshmi H. Nagaraj, Swagatam Mukhopadhyay, Adel Dayarian, Anirvan M. Sengupta
Software Mentions: 3
Published: almost 11 years ago
10.1038/s41598-018-32511-1
Enhanced Prediction of Hot Spots at Protein-Protein Interfaces Using Extreme Gradient BoostingCited by: 62
Author(s): Hao Wang, Chuyao Liu, Lei Deng
Software Mentions: 3
Published: about 7 years ago
10.3389/fgene.2020.598318
Applications of Support Vector Machine in Genomic Prediction in Pig and Maize PopulationsCited by: 17
Author(s): Wei Zhao, Xueshuang Lai, Dengying Liu, Zhenyang Zhang, Peipei Ma, Qishan Wang, Zhe Zhang, Yuchun Pan
Software Mentions: 3
Published: almost 5 years ago
10.1177/2472555218820805
Evaluation of Machine Learning Classifiers to Predict Compound Mechanism of Action When Transferred across Distinct Cell LinesCited by: 12
Author(s): Scott J. Warchal, John C. Dawson, Neil O. Carragher
Software Mentions: 3
Published: over 6 years ago
10.1186/s12859-021-04194-5
Moonlighting protein prediction using physico-chemical and evolutional properties via machine learning methodsCited by: 8
Author(s): Farshid Shirafkan, Sajjad Gharaghani, Karim Rahimian, Reza H. Sajedi, Javad Zahiri
Software Mentions: 3
Published: over 4 years ago
10.1098/rsos.181806
Accurate wisdom of the crowd from unsupervised dimension reductionCited by: 1
Author(s): Lingfei Wang, Tom Michoel
Software Mentions: 3
Published: over 6 years ago
10.3390/plants9020174
Using Rapid Chlorophyll Fluorescence Transients to Classify Vitis GenotypesCited by: 8
Author(s): Jorge Marques da Silva, Andreia Figueiredo, Jorge Cunha, José Eduardo Eiras-Dias, Sara Silva, Leonardo Vanneschi, Pedro Mariano
Software Mentions: 3
Published: almost 6 years ago
10.1186/s13148-021-01110-9
Altered DNA methylation pattern reveals epigenetic regulation of Hox genes in thoracic aortic dissection and serves as a biomarker in disease diagnosisCited by: 5
Author(s): Peiru Liu, Jing Zhang, Duo Du, Dandan Zhang, Zelin Jin, Qiu Wan-hua, Xinchen Zhou, Sujun Dong, Mengyu Zhou, Heyu Zhao, Wei Zhang, Jiakang Ma, Song Sun, Weiguo Fu, Yun Liu, Lixin Wang
Software Mentions: 3
Published: over 4 years ago
10.1186/s13007-020-00620-6
Yield prediction by machine learning from UAS-based multi-sensor data fusion in soybeanCited by: 40
Author(s): Mónica Herrero-Huerta, Pablo Rodríguez‐Gonzálvez, Katy Martin Rainey
Software Mentions: 3
Published: over 5 years ago
10.1186/2052-4374-26-15
Automation of Workplace Lifting Hazard Assessment for Musculoskeletal Injury PreventionCited by: 24
Author(s): June T. Spector, Max Lieblich, Stephen Bao, Kevin J. McQuade, Margaret Hughes
Software Mentions: 3
Published: over 11 years ago
10.3390/polym12122949
Artificial Neural Networks-Based Material Parameter Identification for Numerical Simulations of Additively Manufactured Parts by Material ExtrusionCited by: 20
Author(s): Paul Meißner, Hagen Watschke, Jens Winter, Thomas Vietor
Software Mentions: 3
Published: almost 5 years ago
10.1186/s13007-017-0253-8
Multi-feature machine learning model for automatic segmentation of green fractional vegetation cover for high-throughput field phenotypingCited by: 33
Author(s): Pouria Sadeghi‐Tehran, Nicolas Virlet, Kasra Sabermanesh, Malcolm J. Hawkesford
Software Mentions: 3
Published: almost 8 years ago
10.1186/s12918-018-0550-5
RETRACTED ARTICLE: Detangling PPI networks to uncover functionally meaningful clustersCited by: 5
Author(s): Sarah Hall-Swan, Jake Crawford, Rebecca Newman, Lenore Cowen
Software Mentions: 3
Published: over 7 years ago
10.3390/pharmaceutics11080377
Comparison of Target Features for Predicting Drug-Target Interactions by Deep Neural Network Based on Large-Scale Drug-Induced Transcriptome DataCited by: 22
Author(s): Hanbi Lee, Wankyu Kim
Software Mentions: 3
Published: over 6 years ago
10.1007/s42001-020-00073-w
Estimation of socioeconomic attributes from location informationCited by: 1
Author(s): Shohei Doi, Takayuki Mizuno, Naoya Fujiwara
Software Mentions: 3
Published: over 5 years ago
10.3390/pharmaceutics13071026
Machine Learning Uncovers Adverse Drug Effects on Intestinal BacteriaCited by: 26
Author(s): Laura E. McCoubrey, Moe Elbadawi, Mine Orlu, Simon Gaisford, Abdul W. Basit
Software Mentions: 3
Published: over 4 years ago