Projects: pypi: scikit-learn

https://packages.ecosyste.ms/registries/pypi.org/packages/scikit-learn

A set of python modules for machine learning and data mining
72 versions
Latest release: about 3 years ago
5,918 dependent packages
43,777,417 downloads last month

Enhanced Analysis
Educational Contributors: a.joly@ulg.ac.be vanderplas@astro.washington.edu bh00038@cvplws63.eps.surrey.ac.uk ha258@cornell.edu satra@mit.edu zl2480@columbia.edu pinto@alum.mit.edu jz4721@nyu.edu matteo.visconti.gr@dartmouth.edu vighneshbirodkar@nyu.edu robert.l.marchman@dartmouth.edu rs2715@stern.nyu.edu claire.savard@colorado.edu aaaagrawal@iitb.ac.in ihaque@cs.stanford.edu rspeer@mit.edu mluessi@nmr.mgh.harvard.edu amitibo@tx.technion.ac.il ericchang2017@u.northwestern.edu jkarno@seas.upenn.edu minghui.liu@trincoll.edu m.lyra@sussex.ac.uk andrew.knyazev@ucdenver.edu lamb@cs.stanford.edu camilo@neurostat.mit.edu martino.sorbaro@ed.ac.uk t.sheerman-chase@surrey.ac.uk cgohlke@uci.edu batulaa@drexel.edu kcarnold@alum.mit.edu apw@seas.harvard.edu abie@alum.mit.edu rossbar@berkeley.edu alceballosa@unal.edu.co fhoang7@berkeley.edu hechen@seas.upenn.edu stefan@sun.ac.za deepyaman.datta@utexas.edu rebekah.kim@columbia.edu shubham.bhardwaj2015@vit.ac.in slama@berkeley.edu nisingh@wharton.upenn.edu kanikas3@vt.edu jdlabal@stanford.edu kjells@uw.edu markus.loning.17@ucl.ac.uk k_nzw@klis.tsukuba.ac.jp dkirkby@uci.edu balawson@bu.edu c.brummitt@columbia.edu choo8@illinois.edu giorgio.patrini@anu.edu.au shangwuy@andrew.cmu.edu rafael.possas@sydney.edu.au olsonran@msu.edu brian.mcfee@nyu.edu naj273@nyu.edu dgrusak@trinity.edu emd222@cornell.edu voth0@sewanee.edu trishnendu.dd2014@cs.iiests.ac.in apeng@berkeley.edu boucher@cs.umass.edu lunt@ctbp.ucsd.edu bakhbari@mgh.harvard.edu piraka@brandeis.edu neal.lathia@cl.cam.ac.uk razhoshia@post.bgu.ac.il michal.romaniuk06@ic.ac.uk m.batchkarov@sussex.ac.uk lemin@cs.colostate.edu rudvlf0413@korea.ac.kr vredev16@msu.edu raschkas@msu.edu ali.baharev@univie.ac.at a.krasoulis@sms.ed.ac.uk arokem@berkeley.edu gabrielvr@al.insper.edu.br eric.sanchez1234@email.bakersfieldcollege.edu fcchou@stanford.edu rofuyu@cs.utexas.edu glemaitre@visor.udg.edu naoyaiijima@hiroshima-u.ac.jp ayushgup@iitk.ac.in joel@vlan-2666-10-17-16-173.staff.wireless.sydney.edu.au jam7w2@mail.missouri.edu j.hale09@imperial.ac.uk tw991@nyu.edu patel_zeel@iitgn.ac.in vincent.lostanlen@nyu.edu stvjc@channing.harvard.edu ritchieng@u.nus.edu bansalsi@usc.edu rbarnes@umn.edu rrohan@cs.cmu.edu liutong.zhou@columbia.edu mdh386@nyu.edu mlf419@nyu.edu shreyave@usc.edu jin.siy@northeastern.edu samuel_ainsworth@brown.edu cwijes1@lsu.edu wadawson@ucdavis.edu xinyuliu@umich.edu rz258@cornell.edu daniel.mallia21@myhunter.cuny.edu argriffi@ncsu.edu filipj@umich.edu kms15@case.edu sam.dixon@berkeley.edu khong008@e.ntu.edu.sg jnelso11@gmu.edu jclawton@umich.edu jaehyunahn@sogang.ac.kr ijpulidos@unal.edu.co gstupp@scripps.edu justhube@umich.edu noamkeidar@campus.technion.ac.il nityamd@nyu.edu css459@nyu.edu alyee@ucsd.edu andersk@mit.edu dhanus@mit.edu coreylevinson@uchicago.edu cailean.carter@quadram.ac.uk bral4884@colorado.edu dschult@colgate.edu dpwe@ee.columbia.edu dylan.cashman@tufts.edu pawelsendyk@berkeley.edu qzhang90@gatech.edu mhaberla@calpoly.edu saketk@student.unimelb.edu.au eunjikim@dm.snu.ac.kr erinrhof@uw.edu ksivaman@purdue.edu garmstrong@ucsd.edu konstantin.shmelkov@polytechnique.edu e175774@ie.u-ryukyu.ac.jp hermidal@cs.umd.edu jbearer@hmc.edu jmarin@csail.mit.edu
Repository Activity:
Repository Owner: scikit-learn (organization)
Repositories related to the scikit-learn Python machine learning library. Academic
README Analysis:
Science Score: 100/100
Starting Score: 100 points
Bonuses:
  • +2840 Educational commit emails
    142 contributors with educational email addresses
  • +20 Academic repository owner
    Repository owned by academic institution
  • +15 Institutional repository owner
    Repository owned by research institution
  • +6 Science terms in README
    3 scientific terms found in README
Penalties:
  • -10 PyPI ecosystem
    General-purpose ecosystem

Very Likely Science (100)

Papers Mentioning scikit-learn 2,431

10.1371/journal.pone.0253851
Persistent homology as a new method of the assessment of heart rate variability
Cited by: 6
Author(s): Grzegorz Graff, Beata Graff, Paweł Pilarczyk, Grzegorz Jabłoński, Dariusz Gąsecki, Krzysztof Narkiewicz
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pone.0176486
A novel framework for the identification of drug target proteins: Combining stacked auto-encoders with a biased support vector machine
Cited by: 25
Author(s): Qi Wang, Yanghe Feng, Jincai Huang, Tengjiao Wang, Guangquan Cheng
Software Mentions: 2
Published: over 9 years ago
10.1371/journal.pone.0230136
BRAF V600E mutational load as a prognosis biomarker in malignant melanoma
Cited by: 9
Author(s): Arrate Sevilla, María–Celia Morales, Pilar Ariadna Ezkurra, Javier Rasero, Verónica Velasco, Goikoane Cancho-Galan, Ana Sánchez-Díez, Karmele Mujika, Cristina Penas, Isabel Smith, Aintzane Asumendi, Jesús M. Cortés, María Dolores Boyano, Santos Alonso
Software Mentions: 2
Published: over 6 years ago
10.1371/journal.pone.0230049
Describing the antimicrobial usage patterns of companion animal veterinary practices; free text analysis of more than 4.4 million consultation records
Cited by: 34
Author(s): Brian Hur, Laura Y. Hardefeldt, Karin Verspoor, Timothy Baldwin, James R. Gilkerson
Software Mentions: 2
Published: over 6 years ago
10.1371/journal.pone.0237587
FeAture Explorer (FAE): A tool for developing and comparing radiomics models
Cited by: 101
Author(s): Yang Song, Jing Zhang, Yudong Zhang, Ying Hou, Yan Xu, Yida Wang, Minxiong Zhou, Yefeng Yao, Guang Yang
Software Mentions: 2
Published: about 6 years ago
10.1371/journal.pone.0246980
Development and validation of a cellular host response test as an early diagnostic for sepsis
Cited by: 17
Author(s): Lionel Guillou, Roya Sheybani, Anne E. Jensen, Dino Di Carlo, Terrell Caffery, Christopher Thomas, Ajay Shah, Henry T. K. Tse, Hollis R. O’Neal
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pone.0219389
Document vectorization method using network information of words
Cited by: 3
Author(s): Sang Yup Lee
Software Mentions: 2
Published: over 7 years ago
10.1371/journal.pone.0242375
Altered kinetics of circulating progenitor cells in cardiopulmonary bypass (CPB) associated vasoplegic patients: A pilot study
Cited by: 0
Author(s): Sanhita Nandi, Uma Rani Potunuru, Chandrani Kumari, Abel Arul Nathan, Jayashree Gopal, Gautam I. Menon, Rahul Siddharthan, Madhulika Dixit, Paul Ramesh Thangaraj
Software Mentions: 2
Published: almost 6 years ago
10.3390/cancers13153723
Site-Specific Variation in Radiomic Features of Head and Neck Squamous Cell Carcinoma and Its Impact on Machine Learning Models
Cited by: 5
Author(s): Xiaoyang Liu, Farhad Maleki, N. Moorthy Muthukrishnan, Katie Ovens, Shao Hui Huang, Almudena Pérez Lara, Griselda Romero-Sánchez, Sahir Bhatnagar, A. Chatterjee, Marc Pusztaszeri, Alan Spatz, Gerald Batist, Sam Payabvash, Stefan P. Haider, Amit Mahajan, Caroline Reinhold, Behzad Forghani, Eugene Yu, Reza Forghani
Software Mentions: 2
Published: over 5 years ago
10.3390/cancers13112766
Automated Detection and Classification of Oral Lesions Using Deep Learning to Detect Oral Potentially Malignant Disorders
Cited by: 38
Author(s): Gizem Tanriver, Merva Soluk Tekkeşın, Onur Ergen
Software Mentions: 2
Published: over 5 years ago
10.3390/cancers13102342
Voxelwise Principal Component Analysis of Dynamic [S-Methyl-11C]Methionine PET Data in Glioma Patients
Cited by: 9
Author(s): Corentin Martens, Olivier Debeir, Christine Decaestecker, Thierry Metens, Laetitia Lebrun, Gil Leurquin‐Sterk, Nicola Trotta, Serge Goldman, Gaëtan Van Simaeys
Software Mentions: 2
Published: over 5 years ago
10.3390/cancers11111680
Radiomics Model Based on Non-Contrast CT Shows No Predictive Power for Complete Pathological Response in Locally Advanced Rectal Cancer
Cited by: 22
Author(s): Gordian Hamerla, Hans‐Jonas Meyer, Peter Hambsch, U. Wolf, Thomas Kuhnt, Karl‐Titus Hoffmann, Alexey Surov
Software Mentions: 2
Published: about 7 years ago
10.3390/cancers13133106
SurvCNN: A Discrete Time-to-Event Cancer Survival Estimation Framework Using Image Representations of Omics Data
Cited by: 1
Author(s): Yogesh Kalakoti, Shashank Yadav, Durai Sundar
Software Mentions: 2
Published: over 5 years ago
10.3390/cancers11111751
The Performance of Different Artificial Intelligence Models in Predicting Breast Cancer among Individuals Having Type 2 Diabetes Mellitus
Cited by: 7
Author(s): Meng-Hsuen Hsieh, Li‐Min Sun, Cheng‐Li Lin, Meng-Ju Hsieh, Chung Y. Hsu, Chia Hung Kao
Software Mentions: 2
Published: about 7 years ago
10.1016/j.celrep.2021.109566
Synchronization patterns reveal neuronal coding of working memory content
Cited by: 11
Author(s): Fahimeh Mamashli, Sheraz Khan, Matti S. Hämäläinen, Mainak Jas, Tommi Raij, Steven M. Stufflebeam, Aapo Nummenmaa, Jyrki Ahveninen
Software Mentions: 2
Published: over 5 years ago
10.1016/j.celrep.2020.02.094
Machine Learning Uncovers Food- and Excipient-Drug Interactions
Cited by: 34
Author(s): Daniel Reker, Yulei Shi, Ameya R. Kirtane, Kaitlyn Hess, Grace Zhong, Evan Crane, Chin‐Feng Lin, Robert Langer, Giovanni Traverso
Software Mentions: 2
Published: over 6 years ago
10.3390/cells9020326
Computational Detection of Breast Cancer Invasiveness with DNA Methylation Biomarkers
Cited by: 5
Author(s): Chuyu Wang, Ning Zhao, Linlin Yuan, Xiaoyan Liu
Software Mentions: 2
Published: almost 7 years ago
10.1093/texcom/tgaa066
Cortical Tuning is Impaired After Perceptual Experience in Primary Visual Cortex of Serotonin Transporter-Deficient Mice
Cited by: 0
Author(s): Alexandr Pak, Alexander A. Chubykin
Software Mentions: 2
Published: almost 7 years ago
10.1039/c9sc05999g
Benchmarking the acceleration of materials discovery by sequential learning
Cited by: 74
Author(s): Brian A. Rohr, Helge S. Stein, Dan Guevarra, Yu Wang, Joel A. Haber, Muratahan Aykol, Santosh K. Suram, John M. Gregoire
Software Mentions: 2
Published: almost 7 years ago
10.1038/s42003-020-01535-7
Fast automated detection of COVID-19 from medical images using convolutional neural networks
Cited by: 38
Author(s): Shuang Liang, Huixiang Liu, Yu Gu, Xiuhua Guo, Hongjun Li, Li Li, Zhiyuan Wu, Mengyang Li, Lixin Tao
Software Mentions: 2
Published: almost 6 years ago
10.1038/s42003-019-0707-9
Decoding speech from spike-based neural population recordings in secondary auditory cortex of non-human primates
Cited by: 23
Author(s): Christopher Heelan, Ji-Hun Lee, Ronan O’Shea, Laurie Lynch, David M. Brandman, Wilson Truccolo, A. V. Nurmikko
Software Mentions: 2
Published: almost 7 years ago
10.3389/fnbeh.2021.690571
A Flying Platform to Investigate Neuronal Correlates of Navigation in the Honey Bee (Apis mellifera)
Cited by: 3
Author(s): Benjamin H. Paffhausen, Julian Petrasch, Benjamin Wild, Thierry Meurers, Tobias Schülke, Johannes Polster, Inga Fuchs, Helmut Drexler, Oleksandra Kuriatnyk, Randolf Menzel, Tim Landgraf
Software Mentions: 2
Published: over 5 years ago
10.3389/fnbeh.2017.00122
Using Virtual Reality to Assess Ethical Decisions in Road Traffic Scenarios: Applicability of Value-of-Life-Based Models and Influences of Time Pressure
Cited by: 60
Author(s): Leon René Sütfeld, Richard Gast, Peter König, Gordon Pipa
Software Mentions: 2
Published: over 9 years ago
10.3389/fbioe.2020.00033
Tibial Acceleration-Based Prediction of Maximal Vertical Loading Rate During Overground Running: A Machine Learning Approach
Cited by: 18
Author(s): Rud Derie, Pieter Robberechts, Pieter Van den Berghe, Joeri Gerlo, Dirk De Clercq, Veerle Segers, Jesse Davis
Software Mentions: 2
Published: almost 7 years ago
10.3389/fbioe.2018.00202
The Relationship Between Microbial Community Structures and Environmental Parameters Revealed by Metagenomic Analysis of Hot Spring Water in the Kirishima Area, Japan
Cited by: 24
Author(s): Eri Nishiyama, Koichi Higashi, Hiroshi Mori, K. Suda, Hitomi Nakamura, Soichi Omori, Shigenori Maruyama, Yuichi Hongoh, Ken Kurokawa
Software Mentions: 2
Published: almost 8 years ago
10.3389/fbioe.2020.00737
A Neural Network Framework for Predicting the Tissue-of-Origin of 15 Common Cancer Types Based on RNA-Seq Data
Cited by: 21
Author(s): Binsheng He, Yanxiang Zhang, Zhen Zhou, Bo Wang, Yuebin Liang, Jidong Lang, Huixin Lin, Pingping Bing, Lan Yu, Dejun Sun, Huaiqing Luo, Jialiang Yang, Geng Tian
Software Mentions: 2
Published: over 6 years ago
10.3389/fbioe.2020.558880
OpSeF: Open Source Python Framework for Collaborative Instance Segmentation of Bioimages
Cited by: 7
Author(s): Tobias M. Rasse, Réka Hollandi, Péter Horváth
Software Mentions: 2
Published: about 6 years ago
10.3389/fcvm.2020.591368
Radiomics Signatures of Cardiovascular Risk Factors in Cardiac MRI: Results From the UK Biobank
Cited by: 29
Author(s): Irem Cetin, Zahra Raisi‐Estabragh, Steffen E. Petersen, Sandy Napel, Stefan K. Piechnik, Stefan Neubauer, Miguel Ángel González Ballester, Óscar Cámara, Karim Lekadir
Software Mentions: 2
Published: about 6 years ago
10.3389/fcvm.2021.684004
Early Prediction of Left Ventricular Reverse Remodeling in First-Diagnosed Idiopathic Dilated Cardiomyopathy: A Comparison of Linear Model, Random Forest, and Extreme Gradient Boosting
Cited by: 5
Author(s): Xinhua Xie, Mingwei Yang, Shan Xie, Xiaoying Wu, Yuan Jiang, Zhaoyu Liu, Huiying Zhao, Yangxin Chen, Yuling Zhang, Jingfeng Wang
Software Mentions: 2
Published: over 5 years ago
10.3389/fcell.2021.605977
Prediction of Lymph-Node Metastasis in Cancers Using Differentially Expressed mRNA and Non-coding RNA Signatures
Cited by: 4
Author(s): Shihua Zhang, Cheng Zhang, Jinke Du, Rui Zhang, Shixiong Yang, Bo Li, Pingping Wang, Wensheng Deng
Software Mentions: 2
Published: over 5 years ago
10.3389/fcimb.2020.616814
Tonsil Mycobiome in PFAPA (Periodic Fever, Aphthous Stomatitis, Pharyngitis, Adenitis) Syndrome: A Case-Control Study
Cited by: 0
Author(s): Mysore V. Tejesvi, Terhi Tapiainen, Petri Vänni, Matti Uhari, Marko Suokas, Ulla Lantto, Petri Koivunen, Marjo Renko
Software Mentions: 2
Published: almost 6 years ago
10.3389/fchem.2019.00315
Ligand Binding Induces Agonistic-Like Conformational Adaptations in Helix 12 of Progesterone Receptor Ligand Binding Domain
Cited by: 5
Author(s): Lihe Zheng, Kelin Xia, Yuguang Mu
Software Mentions: 2
Published: over 7 years ago
10.3389/fchem.2019.00035
e-Sweet: A Machine-Learning Based Platform for the Prediction of Sweetener and Its Relative Sweetness
Cited by: 23
Author(s): Suqing Zheng, Wenping Chang, Wenxin Xu, Yong Xu, Lin Fu
Software Mentions: 2
Published: almost 8 years ago
10.3389/fchem.2019.00899
Vienna LiverTox Workspace—A Set of Machine Learning Models for Prediction of Interactions Profiles of Small Molecules With Transporters Relevant for Regulatory Agencies
Cited by: 14
Author(s): Floriane Montanari, Bernhard Knasmüller, Stefan Michael Kohlbacher, Christoph Hillisch, Christine Baierová, Melanie Grandits, Gerhard Ecker
Software Mentions: 2
Published: almost 7 years ago
10.3389/fchem.2019.00211
The Effect of Cofactor Binding on the Conformational Plasticity of the Biological Receptors in Artificial Metalloenzymes: The Case Study of LmrR
Cited by: 9
Author(s): Lur Alonso‐Cotchico, Jaime Rodríguez-Guerra Pedregal, Agustı́ Lledós, Jean‐Didier Maréchal
Software Mentions: 2
Published: over 7 years ago
10.3389/fncom.2019.00039
On the Sparse Structure of Natural Sounds and Natural Images: Similarities, Differences, and Implications for Neural Coding
Cited by: 4
Author(s): Eric McVoy Dodds, Michael R. DeWeese
Software Mentions: 2
Published: over 7 years ago
10.3389/fgene.2020.00760
EnACP: An Ensemble Learning Model for Identification of Anticancer Peptides
Cited by: 20
Author(s): Ruiquan Ge, Guanwen Feng, Xiaoyang Jing, Renfeng Zhang, Pu Wang, Qing Wu
Software Mentions: 2
Published: over 6 years ago
10.3389/fgene.2019.01292
Data-Mining Approach on Transcriptomics and Methylomics Placental Analysis Highlights Genes in Fetal Growth Restriction
Cited by: 13
Author(s): Floris Chabrun, Noémie Huetz, Xavier Dieu, Guillaume Rousseau, Guillaume Bouzillé, Juan Manuel Chao de la Barca, Vincent Procaccio, Guy Lenaers, Odile Blanchet, Guillaume Legendre, Delphine Mirebeau‐Prunier, Marc Cuggia, Philippe Guardiola, Pascal Reynier, Géraldine Gascoin
Software Mentions: 2
Published: almost 7 years ago
10.3389/fgene.2021.650897
Computational Studies of the Structural Basis of Human RPS19 Mutations Associated With Diamond-Blackfan Anemia
Cited by: 1
Author(s): Ke An, Jingbo Zhou, Yao Xiong, Han Wang, Tao Wang, Zhiqiang Ye, Yun Na Wu
Software Mentions: 2
Published: over 5 years ago
10.3389/fgene.2018.00242
Machine Learning on Human Muscle Transcriptomic Data for Biomarker Discovery and Tissue-Specific Drug Target Identification
Cited by: 128
Author(s): Polina Mamoshina, Marina Volosnikova, Ivan V. Ozerov, Evgeny Putin, Ekaterina Skibina, Filomeno Cortese, Alex Zhavoronkov
Software Mentions: 2
Published: over 8 years ago
10.3389/fnhum.2021.716670
Classification of Alzheimer’s Disease Leveraging Multi-task Machine Learning Analysis of Speech and Eye-Movement Data
Cited by: 5
Author(s): Hyeju Jang, Thomas Soroski, Matteo Rizzo, Oswald Barral, Anuj Harisinghani, Sally Newton-Mason, Saffrin Granby, Thiago Monnerat Stutz da Cunha Vasco, Caitlin Lewis, Pavan Tutt, Giuseppe Carenini, Cristina Conati, Thalia S. Field
Software Mentions: 2
Published: about 5 years ago
10.3389/fnhum.2019.00457
Revealing Relationships Among Cognitive Functions Using Functional Connectivity and a Large-Scale Meta-Analysis Database
Cited by: 5
Author(s): Hiroki Kurashige, Jun Kaneko, Yuichi Yamashita, Rieko Osu, Yohei Otaka, Takashi Hanakawa, Manabu Honda, Hideaki Kawabata
Software Mentions: 2
Published: almost 7 years ago
10.3389/fnhum.2020.569973
Case Report of Dual-Site Neurostimulation and Chronic Recording of Cortico-Striatal Circuitry in a Patient With Treatment Refractory Obsessive Compulsive Disorder
Cited by: 25
Author(s): Sarah Olsen, Ishita Basu, Mustafa Taha Bilge, Anish Kanabar, Matthew Boggess, Alexander P Rockhill, Aishwarya Gosai, Elisabeth Hahn, Nir Peled, Michaela Ennis, Ilana Shiff, Katherine Fairbank-Haynes, Joshua D. Salvi, Cristina Cusin, Thilo Deckersbach, Ziv Williams, Justin T. Baker, Darin D. Dougherty, Alik S. Widge
Software Mentions: 2
Published: about 6 years ago
10.3389/fimmu.2017.00034
Novel Structural Parameters of Ig–Ag Complexes Yield a Quantitative Description of Interaction Specificity and Binding Affinity
Cited by: 19
Author(s): Simon Marillet, Marie‐Paule Lefranc, Pierre Boudinot, Frédéric Cazals
Software Mentions: 2
Published: almost 10 years ago
10.3389/fimmu.2019.02820
Detection of Enriched T Cell Epitope Specificity in Full T Cell Receptor Sequence Repertoires
Cited by: 96
Author(s): Sofie Gielis, Pieter Moris, Wout Bittremieux, Nicolas De Neuter, Benson Ogunjimi, Kris Laukens, Pieter Meysman
Software Mentions: 2
Published: almost 7 years ago
10.3389/fmed.2021.673876
Pre-Operative Prediction of Mediastinal Node Metastasis Using Radiomics Model Based on 18F-FDG PET/CT of the Primary Tumor in Non-Small Cell Lung Cancer Patients
Cited by: 7
Author(s): Kai Zheng, Xinrong Wang, Chengzhi Jiang, Yongxiang Tang, Zhihui Fang, Jing Hou, Zehua Zhu, Shuo Hu
Software Mentions: 2
Published: over 5 years ago
10.3389/fmicb.2020.578795
PARMAP: A Pan-Genome-Based Computational Framework for Predicting Antimicrobial Resistance
Cited by: 7
Author(s): Xuefei Li, Jingxia Lin, Yongfei Hu, Jiajian Zhou
Software Mentions: 2
Published: about 6 years ago
10.3389/fmicb.2021.667450
Multi-Omic Analyses Reveal Habitat Adaptation of Marine Cyanobacterium Synechocystis sp. PCC 7338
Cited by: 4
Author(s): Yu‐Jin Jeong, Seong-Joo Hong, Sang-Hyeok Cho, Seongwon Yoon, Hookeun Lee, Hyung‐Kyoon Choi, Dong‐Myung Kim, Choul-Gyun Lee, Suhyung Cho, Byung-Kwan Cho
Software Mentions: 2
Published: over 5 years ago
10.3389/fmicb.2020.01008
Impact of Acute and Chronic Amyloid-β Peptide Exposure on Gut Microbial Commensals in the Mouse
Cited by: 17
Author(s): Malena dos Santos Guilherme, Hristo Todorov, Carina Osterhof, Anton Möllerke, Kristina Cub, Thomas Hankeln, Susanne Gerber, Kristina Endres
Software Mentions: 2
Published: over 6 years ago
10.3389/fmicb.2019.03088
“CATAStrophy,” a Genome-Informed Trophic Classification of Filamentous Plant Pathogens – How Many Different Types of Filamentous Plant Pathogens Are There?
Cited by: 34
Author(s): James K. Hane, Jonathan Paxman, Darcy A. B. Jones, Richard P. Oliver, P.J.G.M. de Wit
Software Mentions: 2
Published: almost 7 years ago
10.3389/fmicb.2019.01687
cano-wgMLST_BacCompare: A Bacterial Genome Analysis Platform for Epidemiological Investigation and Comparative Genomic Analysis
Cited by: 19
Author(s): Yen‐Yi Liu, Ji-Wei Lin, Chih-Chieh Chen
Software Mentions: 2
Published: over 7 years ago
10.3389/fmolb.2020.00132
Time-Lagged t-Distributed Stochastic Neighbor Embedding (t-SNE) of Molecular Simulation Trajectories
Cited by: 25
Author(s): Vojtêch Spiwok, Pavel Kříž
Software Mentions: 2
Published: over 6 years ago
10.3389/fninf.2019.00070
ASD-DiagNet: A Hybrid Learning Approach for Detection of Autism Spectrum Disorder Using fMRI Data
Cited by: 171
Author(s): Taban Eslami, Vahid Mirjalili, A.C.M. Fong, Angela R. Laird, Fahad Saeed
Software Mentions: 2
Published: almost 7 years ago
10.3389/fninf.2018.00055
Decentralized Analysis of Brain Imaging Data: Voxel-Based Morphometry and Dynamic Functional Network Connectivity
Cited by: 15
Author(s): Harshvardhan Gazula, Bradley T. Baker, Eswar Damaraju, Sergey M. Plis, Sandeep R. Panta, Rogers F. Silva, Vince D. Calhoun
Software Mentions: 2
Published: about 8 years ago
10.3389/fneur.2021.670944
A Set of Eight Key Questions Helps to Classify Common Vestibular Disorders—Results From the DizzyReg Patient Registry
Cited by: 7
Author(s): Ralf Strobl, Michael Grözinger, Andreas Zwergal, Doreen Huppert, Filipp Filippopulos, Eva Grill
Software Mentions: 2
Published: over 5 years ago
10.3389/fneur.2020.00007
Prediction of Vestibular Dysfunction by Applying Machine Learning Algorithms to Postural Instability
Cited by: 19
Author(s): Teru Kamogashira, Chisato Fujimoto, Makoto Kinoshita, Yuichiro Kikkawa, Tatsuya Yamasoba, Shinichi Iwasaki
Software Mentions: 2
Published: almost 7 years ago
10.3389/fneur.2020.00886
Multi-Dimensional, Short-Timescale Quantification of Parkinson's Disease and Essential Tremor Motor Dysfunction
Cited by: 5
Author(s): John Sanderson, James Yu, David D. Liu, Daniel E Amaya, Peter M Lauro, Anelyssa D’Abreu, Umer Akbar, Shane Lee, Wael F. Asaad
Software Mentions: 2
Published: about 6 years ago
10.3389/fneur.2019.00996
The Pragmatic Classification of Upper Extremity Motion in Neurological Patients: A Primer
Cited by: 8
Author(s): Avinash Parnandi, Jasim Uddin, Dawn Nilsen, Heidi M. Schambra
Software Mentions: 2
Published: about 7 years ago
10.3389/fneur.2019.00655
Quantifying the Confidence in fMRI-Based Language Lateralisation Through Laterality Index Deconstruction
Cited by: 7
Author(s): Martin Wegrzyn, Markus Mertens, Christian G. Bien, Friedrich G. Woermann, Kirsten Labudda
Software Mentions: 2
Published: over 7 years ago
10.3389/fnbot.2020.578675
Detecting Changes and Avoiding Catastrophic Forgetting in Dynamic Partially Observable Environments
Cited by: 0
Author(s): Jeffery Dick, Paweł Ładosz, Eseoghene Ben-Iwhiwhu, Hideyasu Shimadzu, Peter Kinnell, Praveen K. Pilly, Soheil Kolouri, Andrea Soltoggio
Software Mentions: 2
Published: almost 6 years ago
10.3389/fnins.2021.708196
A Contrast Augmentation Approach to Improve Multi-Scanner Generalization in MRI
Cited by: 4
Author(s): Maria Inês Meyer, Ezequiel de la Rosa, Nuno Pedrosa de Barros, Roberto Paolella, Koen Van Leemput, Diana Sima
Software Mentions: 2
Published: about 5 years ago
10.3389/fnins.2017.00754
White Matter Tract Segmentation as Multiple Linear Assignment Problems
Cited by: 13
Author(s): Nusrat Sharmin, Emanuele Olivetti, Paolo Avesani
Software Mentions: 2
Published: almost 9 years ago
10.3389/fonc.2021.654685
Deep Learning on Enhanced CT Images Can Predict the Muscular Invasiveness of Bladder Cancer
Cited by: 12
Author(s): Gumuyang Zhang, Zhe Wu, Lili Xu, Xiaoxiao Zhang, Daming Zhang, Li Mao, Xiuli Li, Yu Xiao, Jun Guo, Zhigang Ji, Hao Sun, Zhengyu Jin
Software Mentions: 2
Published: over 5 years ago
10.3389/fonc.2020.581037
Exploratory Analysis of Qualitative MR Imaging Features for the Differentiation of Glioblastoma and Brain Metastases
Cited by: 6
Author(s): Raphael Meier, Aurélie Pahud de Mortanges, Roland Wiest, Urspeter Knecht
Software Mentions: 2
Published: almost 6 years ago
10.3389/fonc.2021.637794
Preoperative Prediction of Lymphovascular Space Invasion in Cervical Cancer With Radiomics –Based Nomogram
Cited by: 9
Author(s): Wei Du, Yu Wang, Dongdong Li, Xia Xiang, Qiaoyue Tan, Xiaoming Xiong, Zhiping Li
Software Mentions: 2
Published: over 5 years ago
10.3389/fonc.2018.00627
Data-Driven Discovery of Immune Contexture Biomarkers
Cited by: 19
Author(s): Lars Ole Schwen, Emilia Andersson, Konstanty Korski, Nick Weiss, Sabrina Haase, Fabien Gaire, Horst K. Hahn, André Homeyer, Oliver Grimm
Software Mentions: 2
Published: almost 8 years ago
10.3389/fonc.2020.597486
A Urine-Based Liquid Biopsy Method for Detection of Upper Tract Urinary Carcinoma
Cited by: 11
Author(s): Yan Xu, Xin Ma, Xing Ai, Jiangping Gao, Yiming Liang, Qin Zhang, Tao Ma, Kaisheng Mao, Qiwen Zheng, Sizhen Wang, Yuchen Jiao, Xu Zhang, Hongzhao Li
Software Mentions: 2
Published: almost 6 years ago
10.3389/fonc.2021.621088
Predicting Survival Duration With MRI Radiomics of Brain Metastases From Non-small Cell Lung Cancer
Cited by: 20
Author(s): Bihong T. Chen, Taihao Jin, Ningrong Ye, Isa Mambetsariev, Tao Wang, Chi Wah Wong, Zikuan Chen, Russell C. Rockne, Rivka R. Colen, Andrei I. Holodny, Sagus Sampath, Ravi Salgia
Software Mentions: 2
Published: over 5 years ago
10.3389/fonc.2020.01363
Identification of Predominant Histopathological Growth Patterns of Colorectal Liver Metastasis by Multi-Habitat and Multi-Sequence Based Radiomics Analysis
Cited by: 27
Author(s): Yujia Han, Fan Chai, Jingwei Wei, Yali Yue, Jin Cheng, Dongsheng Gu, Yinli Zhang, Tong Tong, Weiqi Sheng, Nan Hong, Yingjiang Ye, Yi Wang, Jie Tian
Software Mentions: 2
Published: about 6 years ago
10.3389/fped.2021.689190
Long-Term Mechanical Ventilation in Neonates: A 10-Year Overview and Predictive Model
Cited by: 1
Author(s): Michaël Sauthier, Nicolas Sauthier, Krystale Bergeron Gallant, Gregory A. Lodygensky, Atsushı Kawaguchi, Guillaume Émériaud, Philippe Jouvet
Software Mentions: 2
Published: over 5 years ago
10.3389/fphar.2020.606668
Improvement of Prediction Performance With Conjoint Molecular Fingerprint in Deep Learning
Cited by: 27
Author(s): Liangxu Xie, Lei Xu, Ren Kong, Shan Chang, Xiaojun Xu
Software Mentions: 2
Published: almost 6 years ago
10.3389/fphar.2020.00770
Accelerating Therapeutics for Opportunities in Medicine: A Paradigm Shift in Drug Discovery
Cited by: 41
Author(s): Izumi V. Hinkson, Benjamin D. Madej, Eric Stahlberg
Software Mentions: 2
Published: over 6 years ago
10.3389/fphar.2020.00067
Development of Prediction Models for Drug-Induced Cholestasis, Cirrhosis, Hepatitis, and Steatosis Based on Drug and Drug Metabolite Structures
Cited by: 13
Author(s): Hyun Kil Shin, Myung-Gyun Kang, Daeui Park, Tamina Park, Soon-Seek Yoon
Software Mentions: 2
Published: over 6 years ago
10.3389/fphys.2020.01012
Extracting Insights From Temporal Data by Integrating Dynamic Modeling and Machine Learning
Cited by: 5
Author(s): Richard Ballweg, Kristen A. Engevik, Marshall H. Montrose, Eitaro Aihara, Tongli Zhang
Software Mentions: 2
Published: over 6 years ago
10.3389/fphys.2021.683025
HADLN: Hybrid Attention-Based Deep Learning Network for Automated Arrhythmia Classification
Cited by: 9
Author(s): Mingfeng Jiang, Jiayan Gu, Yang Li, Bo Wei, Jucheng Zhang, Zhikang Wang, Ling Xia
Software Mentions: 2
Published: over 5 years ago
10.3389/fphys.2021.738973
Toward Predicting Human Performance Outcomes From Wearable Technologies: A Computational Modeling Approach
Cited by: 7
Author(s): Tad T. Brunyé, Kenny Yau, Kana Okano, Grace Elliott, Sara Olenich, Grace E. Giles, Ester Navarro, Seth Elkin-Frankston, Alexander L Young, Eric L. Miller
Software Mentions: 2
Published: about 5 years ago
10.3389/fpls.2020.577063
Investigation on Data Fusion of Multisource Spectral Data for Rice Leaf Diseases Identification Using Machine Learning Methods
Cited by: 34
Author(s): Feng Liu, Bangyu Wu, Susu Zhu, Junmin Wang, Zhen-Zhu Su, Fei Liu, Yong He
Software Mentions: 2
Published: about 6 years ago
10.3389/fpls.2021.604510
Combining Multi-Dimensional Convolutional Neural Network (CNN) With Visualization Method for Detection of Aphis gossypii Glover Infection in Cotton Leaves Using Hyperspectral Imaging
Cited by: 32
Author(s): Tianying Yan, Wei Xu, Lin Jiao, Long Duan, Pan Gao, Chu Zhang, Xin Lv
Software Mentions: 2
Published: over 5 years ago
10.3389/fpls.2020.01275
Volumetric Segmentation of Cell Cycle Markers in Confocal Images Using Machine Learning and Deep Learning
Cited by: 3
Author(s): Faraz Ahmad Khan, Ute Voß, Michael P. Pound, A. P. French
Software Mentions: 2
Published: about 6 years ago
10.3389/fpls.2020.00701
BRIDGE – A Visual Analytics Web Tool for Barley Genebank Genomics
Cited by: 27
Author(s): Patrick König, Sebastian Beier, Martín Basterrechea, Danuta Schüler, Daniel Arend, Martin Mascher, Nils Stein, Uwe Scholz, Matthias Lange
Software Mentions: 2
Published: over 6 years ago
10.1109/JTEHM.2019.2940900
Automated Detection of Parkinson’s Disease Based on Multiple Types of Sustained Phonations Using Linear Discriminant Analysis and Genetically Optimized Neural Network
Cited by: 116
Author(s): Liaqat Ali, Ce Zhu, Zhonghao Zhang, Yipeng Liu
Software Mentions: 2
Published: almost 8 years ago
10.1098/rsfs.2016.0018
Development of an open technology sensor suite for assisted living: a student-led research project
Cited by: 4
Author(s): James D. Manton, Josie Hughes, Oliver Bonner, Omar A. Amjad, Philip Mair, Isabella Miele, Tiesheng Wang, Vitaly Levdik, Richard Hall, Géraldine Baekelandt, Fernando da Cruz Vasconcellos, O. Hadeler, Tanya Hutter, Clemens F. Kaminski
Software Mentions: 2
Published: over 10 years ago
10.1001/jamanetworkopen.2019.7314
Comparative Effectiveness of New Approaches to Improve Mortality Risk Models From Medicare Claims Data
Cited by: 19
Author(s): Harlan M. Krumholz, Andreas Coppi, Frederick Warner, Elizabeth W. Triche, Shuxia Li, Shiwani Mahajan, Yixin Li, Susannah M. Bernheim, Jacqueline N. Grady, Karen Dorsey, Zhenqiu Lin, Sharon‐Lise T. Normand
Software Mentions: 2
Published: over 7 years ago
10.1001/jamanetworkopen.2020.2875
Assessment of Potentially Inappropriate Prescribing of Opioid Analgesics Requiring Prior Opioid Tolerance
Cited by: 5
Author(s): Molly Moore Jeffery, Christine E. Chaisson, Christopher A. Hane, Louis Rumanes, Jamie Tucker, Lillian Hang, Rozalina G. McCoy, Catherine L. Chen, Mark C. Bicket, W. Michael Hooten, Marc R. Larochelle, William C. Becker, Cynthia Kornegay, Judith A. Racoosin, Darshak M. Sanghavi
Software Mentions: 2
Published: over 6 years ago
10.1093/jamiaopen/ooaa006
Machine learning for early detection of sepsis: an internal and temporal validation study
Cited by: 44
Author(s): Armando Bedoya, Joseph Futoma, Meredith E. Clement, Kristin Corey, Nathan Brajer, Anthony Lin, Morgan G. Simons, Michael Gao, Marshall Nichols, Suresh Balu, Katherine Heller, Mark Sendak, Cara O’Brien
Software Mentions: 2
Published: over 6 years ago
10.1107/S1600576720011103
Density-based clustering of crystal (mis)orientations and the <i>orix</i> Python library
Cited by: 14
Author(s): Duncan N. Johnstone, Baudouin Martineau, Phillip Crout, Paul A. Midgley, Alexander S. Eggeman
Software Mentions: 2
Published: about 6 years ago
10.1186/s40537-021-00488-w
Investigating the impact of pre-processing techniques and pre-trained word embeddings in detecting Arabic health information on social media
Cited by: 19
Author(s): Yahya Albalawi, Jim Buckley, Nikola S. Nikolov
Software Mentions: 2
Published: over 5 years ago
10.1186/s12968-020-00690-4
Deep learning to diagnose cardiac amyloidosis from cardiovascular magnetic resonance
Cited by: 29
Author(s): Nicola Mondaini, Alberto Aimo, Andrea Barison, Daniele Della Latta, Giuseppe Vergaro, Giovanni Donato Aquaro, Andrea Ripoli, Michele Emdin, Dante Chiappino
Software Mentions: 2
Published: almost 6 years ago
10.1083/jcb.201909178
A direct role for SNX9 in the biogenesis of filopodia
Cited by: 8
Author(s): Iris K. Jarsch, Jonathan R Gadsby, Annalisa Nuccitelli, Julia Mason, Hanae Shimo, Ludovic Pilloux, N. Bishara Marzook, Claire M. Mulvey, Ulrich Dobramysl, Charles R. Bradshaw, Kathryn S. Lilley, Richard Hayward, Tristan J. Vaughan, Claire Dobson, Jennifer L. Gallop
Software Mentions: 2
Published: over 6 years ago
10.1186/1758-2946-5-43
Similarity maps - a visualization strategy for molecular fingerprints and machine-learning methods
Cited by: 110
Author(s): Sereina Riniker, Gregory A. Landrum
Software Mentions: 2
Published: about 13 years ago
10.1186/s13321-015-0090-6
Synergy Maps: exploring compound combinations using network-based visualization
Cited by: 34
Author(s): Richard P. Lewis, Rajarshi Guha, Tamás Korcsmáros, Andreas Bender
Software Mentions: 2
Published: over 11 years ago
10.1186/s13321-016-0121-y
Selectivity profiling of BCRP versus P-gp inhibition: from automated collection of polypharmacology data to multi-label learning
Cited by: 25
Author(s): Floriane Montanari, Barbara Zdrazil, Daniela Digles, Gerhard Ecker
Software Mentions: 2
Published: almost 11 years ago
10.1186/s13321-016-0184-9
Utilizing maximal frequent itemsets and social network analysis for HIV data analysis
Cited by: 1
Author(s): Yunuscan Koçak, Tansel Özyer, Reda Alhajj
Software Mentions: 2
Published: almost 10 years ago
10.1186/s13321-019-0348-5
QligFEP: an automated workflow for small molecule free energy calculations in Q
Cited by: 46
Author(s): Willem Jespers, Mauricio Esguerra, Johan Åqvist, Hugo Gutiérrez‐de‐Terán
Software Mentions: 2
Published: over 7 years ago
10.1186/s13321-019-0356-5
Leveraging heterogeneous data from GHS toxicity annotations, molecular and protein target descriptors and Tox21 assay readouts to predict and rationalise acute toxicity
Cited by: 5
Author(s): Chad H. G. Allen, Lewis Mervin, Samar Mahmoud, Andreas Bender
Software Mentions: 2
Published: over 7 years ago
10.1186/s13321-019-0381-4
Machine learning models for hydrogen bond donor and acceptor strengths using large and diverse training data generated by first-principles interaction free energies
Cited by: 16
Author(s): Christoph Bauer, Gisbert Schneider, Andreas H. Göller
Software Mentions: 2
Published: about 7 years ago
10.1186/s13321-019-0391-2
Dataset’s chemical diversity limits the generalizability of machine learning predictions
Cited by: 59
Author(s): Marta Glavatskikh, Jules Leguy, Gilles Hunault, Thomas Cauchy, Benoit Da Mota
Software Mentions: 2
Published: almost 7 years ago
10.1186/s13321-019-0402-3
Learning important features from multi-view data to predict drug side effects
Cited by: 7
Author(s): Xujun Liang, Peng Fei Zhang, Jun Li, Ying Fu, Lingzhi Qu, Yongheng Chen, Zhuchu Chen
Software Mentions: 2
Published: almost 7 years ago
10.1186/s13321-020-00435-6
kGCN: a graph-based deep learning framework for chemical structures
Cited by: 49
Author(s): Ryosuke Kojima, Shoichi Ishida, Masateru Ohta, Hiroaki Iwata, Teruki Honma, Yasushi Okuno
Software Mentions: 2
Published: over 6 years ago
10.1186/s13321-020-00443-6
QSAR-derived affinity fingerprints (part 1): fingerprint construction and modeling performance for similarity searching, bioactivity classification and scaffold hopping
Cited by: 25
Author(s): Ctibor Škuta, Isidro Cortés-Ciriano, Wim Dehaen, Pavel Kříž, Gerard J. P. van Westen, Igor V. Tetko, Andreas Bender, Daniel Svozil
Software Mentions: 2
Published: over 6 years ago