pypi: scikit-image | Projects | Ecosyste.ms: Papers

10.3390/s20216219

Solar Panel Detection within Complex Backgrounds Using Thermal Images Acquired by UAVs
Cited by: 21
Author(s): Jhon Jairo Vega Díaz, Michiel Vlaminck, Dionysios Lefkaditis, Sergio Alejandro Orjuela Vargas, Hiêp Luong
Software Mentions: 2
Published: about 4 years ago

10.3390/s21061993

Efficiency of Machine Learning Algorithms for the Determination of Macrovesicular Steatosis in Frozen Sections Stained with Sudan to Evaluate the Quality of the Graft in Liver Transplantation
Cited by: 11
Author(s): Fernando Pérez-Sánz, Carole Escartin, Enrique Martínez‐Barba, Jesús de la Peña-Moral, Alejandro Salazar Nicolás, Marina Carpes-Ruiz, Ángel Esteban-Gil, María del Carmen Legaz-García, María Antonia Parreño-González, Pablo Ramírez, Carlos Martínez
Software Mentions: 2
Published: over 3 years ago

10.3390/s21123997

First Step toward Gestural Recognition in Harsh Environments
Cited by: 1
Author(s): Omri Alon, Sharon Rabinovich, Chana Fyodorov, Jessica R. Cauchard
Software Mentions: 2
Published: over 3 years ago

10.3389/fbioe.2020.558880

OpSeF: Open Source Python Framework for Collaborative Instance Segmentation of Bioimages
Cited by: 7
Author(s): Tobias M. Rasse, Réka Hollandi, Péter Horváth
Software Mentions: 2
Published: about 4 years ago

10.3390/ma12030446

Scanning 3DXRD Measurement of Grain Growth, Stress, and Formation of Cu6Sn5 around a Tin Whisker during Heat Treatment
Cited by: 36
Author(s): Johan Hektor, Stephen A. Hall, Axel Henningsson, Jonas Engqvist, Matti Ristinmaa, Filip Lenrick, Jonathan P. Wright
Software Mentions: 2
Published: almost 6 years ago

10.1007/s00726-021-02953-5

In vivo emergence of beige-like fat in chickens as physiological adaptation to cold environments
Cited by: 5
Author(s): Rina Sotome, Akira Hirasawa, Motoi Kikusato, Taku Amo, Kyohei Furukawa, Anna Kuriyagawa, Kouichi Watanabe, Anne Collin, Hitoshi Shirakawa, Ryota Hirakawa, Yuta Tanitaka, Hideki Takahashi, Guoyao Wu, Tomonori Nochi, Tsuyoshi Shimmura, Craig H Warden, Masaaki Toyomizu
Software Mentions: 2
Published: almost 4 years ago

10.3390/jimaging6120135

A Computationally Efficient Reconstruction Algorithm for Circular Cone-Beam Computed Tomography Using Shallow Neural Networks
Cited by: 4
Author(s): Marinus J. Lagerwerf, Daniël M. Pelt, Willem Jan Palenstijn, Kees Joost Batenburg
Software Mentions: 2
Published: almost 4 years ago

10.3390/biomimetics6020023

Wind Dispersal of Natural and Biomimetic Maple Samaras
Cited by: 10
Author(s): Gary K. Nave, Nathaniel J. Hall, Katrina Somers, Brock Davis, Hope A. Gruszewski, Craig Powers, Michael Collver, David G. Schmale, Shane D. Ross
Software Mentions: 2
Published: over 3 years ago

10.3389/fnins.2021.683426

Convolutional Neural Net Learning Can Achieve Production-Level Brain Segmentation in Structural Magnetic Resonance Imaging
Cited by: 12
Author(s): Evan Fletcher, Charles DeCarli, Audrey P. Fan, Alexander Knaack
Software Mentions: 2
Published: over 3 years ago

10.7554/eLife.51185

Apolipoprotein L-1 renal risk variants form active channels at the plasma membrane driving cytotoxicity
Cited by: 36
Author(s): Joseph GIovinazzo, Russell Thomson, Nailya Khalizova, Patrick J. Zager, Nirav Malani, Enrique Rodríguez-Boulan, Jayne Raper, Ryan Schreiner
Software Mentions: 2
Published: over 4 years ago

10.1523/ENEURO.0092-21.2021

COUNTEN, an AI-Driven Tool for Rapid and Objective Structural Analyses of the Enteric Nervous System
Cited by: 2
Author(s): Yuta Kobayashi, Alicia Bukowski, Das S, Cédric Espenel, Julieta Gomez-Frittelli, Narayani Wagle, Shriya Bakshi, Monalee Saha, Julia A. Kaltschmidt, Archana Venkataraman, Subhash Kulkarni
Software Mentions: 2
Published: over 3 years ago

10.1186/s12859-021-04344-9

CellProfiler 4: improvements in speed, utility and usability
Cited by: 388
Author(s): David R. Stirling, Madison J. Swain-Bowden, Alice M. Lucas, Anne E. Carpenter, Beth A. Cimini, Allen Goodman
Software Mentions: 2
Published: about 3 years ago

10.3389/fphys.2019.01416

QuantiMus: A Machine Learning-Based Approach for High Precision Analysis of Skeletal Muscle Morphology
Cited by: 24
Author(s): Jenna M. Kastenschmidt, Kyle L. Ellefsen, Ali H. Mannaa, Jesse J. Giebel, Rayan Yahia, Rachel E. Ayer, Phillip Pham, Rodolfo Rios, Sylvia Vetrone, Tahseen Mozaffar, S. Armando Villalta
Software Mentions: 2
Published: almost 5 years ago

10.1186/s13007-021-00749-y

High-throughput soybean seeds phenotyping with convolutional neural networks and transfer learning
Cited by: 23
Author(s): Shuanying Yang, Lihua Zheng, Peng He, Tingting Wu, Shi Sun, Minjuan Wang
Software Mentions: 2
Published: over 3 years ago

10.7554/eLife.28507

The AAA protein Msp1 mediates clearance of excess tail-anchored proteins from the peroxisomal membrane
Cited by: 65
Author(s): N. Weir, Roarke A. Kamber, James S Martenson, Vladimir Denic
Software Mentions: 2
Published: about 7 years ago

10.7554/eLife.42138

Motor context dominates output from purkinje cell functional regions during reflexive visuomotor behaviours
Cited by: 35
Author(s): Laura D. Knogler, Andreas M. Kist, Rubén Portugues
Software Mentions: 2
Published: almost 6 years ago

10.1107/S1600577520010838

X-ray Spectral Imaging Program: XSIP
Cited by: 0
Author(s): Peng Qi, Nazanin Samadi, Dean Chapman
Software Mentions: 2
Published: about 4 years ago

10.7554/eLife.38497

A liquid-like organelle at the root of motile ciliopathy
Cited by: 50
Author(s): Ryan L. Huizar, Chanjae Lee, Alexander A. Boulgakov, Amjad Horani, Fan Tu, Edward M. Marcotte, Steven L. Brody, John B. Wallingford
Software Mentions: 2
Published: almost 6 years ago

10.7554/eLife.62386

Osmolarity-independent electrical cues guide rapid response to injury in zebrafish epidermis
Cited by: 24
Author(s): Andrew S. Kennard, Julie A. Theriot
Software Mentions: 2
Published: almost 4 years ago

10.3390/ijms22157880

Microfabrication of a Chamber for High-Resolution, In Situ Imaging of the Whole Root for Plant–Microbe Interactions
Cited by: 5
Author(s): Lauren K. Jabusch, Peter W. Kim, Dawn Chiniquy, Zhiying Zhao, Bing Wang, Benjamin P. Bowen, Ashley J. Kang, Yasuo Yoshikuni, Adam M. Deutschbauer, Anup Singh, Trent Northen
Software Mentions: 2
Published: over 3 years ago

10.1534/g3.118.200374

Acute Effects of Drugs onCaenorhabditis elegansMovement Reveal Complex Responses and Plasticity
Cited by: 22
Author(s): Mark Spensley, Samantha Del Borrello, Djina Pajkic, Andrew G. Fraser
Software Mentions: 2
Published: about 6 years ago

10.1186/s13007-017-0246-7

A robot-assisted imaging pipeline for tracking the growths of maize ear and silks in a high-throughput phenotyping platform
Cited by: 69
Author(s): Nicolas Brichet, Christian Fournier, Olivier Turc, Olivier Strauss, Simon Artzet, Christophe Pradal, Claude Welcker, François Tardieu, Llorenç Cabrera‐Bosquet
Software Mentions: 2
Published: about 7 years ago

10.1038/s41598-020-77933-y

Topological image modification for object detection and topological image processing of skin lesions
Cited by: 8
Author(s): Robin Vandaele, Guillaume Adrien Nervo, Olivier Gevaert
Software Mentions: 2
Published: almost 4 years ago

10.1186/s13007-019-0546-1

Fluctuating light experiments and semi-automated plant phenotyping enabled by self-built growth racks and simple upgrades to the IMAGING-PAM
Cited by: 9
Author(s): Dominik Schneider, Laura S. López, Meng Li, Joseph Crawford, Helmut Kirchhoff, Hans‐Henning Kunz
Software Mentions: 2
Published: almost 5 years ago

10.1371/journal.pbio.2005970

CellProfiler 3.0: Next-generation image processing for biology
Cited by: 1,445
Author(s): Claire McQuin, Allen Goodman, Vasiliy S. Chernyshev, Lee Kamentsky, Beth A. Cimini, Kyle W. Karhohs, Minh Doan, Liya Ding, Susanne M. Rafelski, Derek Thirstrup, Winfried Wiegraebe, Shantanu Singh, Tim Becker, Juan C. Caicedo, Anne E. Carpenter
Software Mentions: 2
Published: over 6 years ago

10.1117/1.JBO.25.11.116004

Theoretical lateral and axial sensitivity limits and choices of molecular reporters for Cherenkov-excited luminescence in tissue during x-ray beam scanning
Cited by: 1
Author(s): Ethan LaRochelle, Brian W. Pogue
Software Mentions: 2
Published: about 4 years ago

10.1107/S1600577521007153

Improving reproducibility in synchrotron tomography using implementation-adapted filters
Cited by: 0
Author(s): Poulami Somanya Ganguly, Daniël M. Pelt, Doğa Gürsoy, Francesco De Carlo, Kees Joost Batenburg
Software Mentions: 2
Published: over 3 years ago

10.3390/mps3010014

Analysis and Model of Cortical Slow Waves Acquired with Optical Techniques
Cited by: 7
Author(s): Marco Celotto, Chiara De Luca, Paolo Muratore, Anna Letizia Allegra Mascaro, Francesco S. Pavone, G. De Bonis, P. Paolucci
Software Mentions: 2
Published: almost 5 years ago

10.1093/jxb/ery309

Genetic and environmental dissection of biomass accumulation in multi-genotype maize canopies
Cited by: 26
Author(s): Tsu‐Wei Chen, Llorenç Cabrera‐Bosquet, Santiago Alvarez Prado, Raphaël Perez, Simon Artzet, Christophe Pradal, Aude Coupel‐Ledru, Christian Fournier, Francois F. Tardieu
Software Mentions: 2
Published: over 5 years ago

10.3390/ma14164507

Towards Automatic Detection of Precipitates in Inconel 625 Superalloy Additively Manufactured by the L-PBF Method
Cited by: 4
Author(s): Piotr Macioł, J. Falkus, Paulina Indyka, B. Dubiel
Software Mentions: 2
Published: over 3 years ago

10.1126/sciadv.abe1969

Microrheology reveals simultaneous cell-mediated matrix stiffening and fluidization that underlie breast cancer invasion
Cited by: 17
Author(s): Brad A. Krajina, Bauer L. LeSavage, Julien G. Roth, Audrey Zhu, Pamela C. Cai, Andrew J. Spakowitz, Sarah C. Heilshorn
Software Mentions: 2
Published: almost 4 years ago

10.1038/srep33173

Quantitative high-throughput population dynamics in continuous-culture by automated microscopy
Cited by: 8
Author(s): Jason Merritt, Seppe Kuehn
Software Mentions: 2
Published: about 8 years ago

10.1038/s42003-021-02486-3

Expression of a human cDNA in moss results in spliced mRNAs and fragmentary protein isoforms
Cited by: 8
Author(s): Oguz Top, Stella W. L. Milferstaedt, Nico van Gessel, Sebastian N. W. Hoernstein, Buğra Özdemir, Eva L. Decker, Ralf Reski
Software Mentions: 2
Published: over 3 years ago

10.1038/s41598-019-48113-4

Silver ions cause oscillation of bacterial length of Escherichia coli
Cited by: 8
Author(s): Venkata Rao Krishnamurthi, Jingyi Chen, Yong Wang
Software Mentions: 2
Published: over 5 years ago

10.1038/s41598-019-51526-w

Local redox conditions in cells imaged via non-fluorescent transient states of NAD(P)H
Cited by: 8
Author(s): Johan Tornmalm, Elin Sandberg, Mihailo D. Rabasović, Jerker Widengren
Software Mentions: 2
Published: about 5 years ago

10.1038/s42003-020-0905-5

Training instance segmentation neural network with synthetic datasets for crop seed phenotyping
Cited by: 71
Author(s): Yosuke Toda, Fumio Okura, Jun Ito, Satoshi Okada, Toshinori Kinoshita, Hiroyuki Tsuji, Daisuke Sugiyama
Software Mentions: 2
Published: over 4 years ago

10.7554/eLife.52373

Ankyrin-G mediates targeting of both Na+ and KATP channels to the rat cardiac intercalated disc
Cited by: 21
Author(s): Hua-Qian Yang, Marta Pérez-Hernández, Jose L. Sanchez-Alonso, Andriy Shevchuk, Julia Gorelik, Eli Rothenberg, Mario Delmar, William A. Coetzee
Software Mentions: 1
Published: almost 5 years ago

10.1186/s13007-016-0114-x

A method for detecting single mRNA molecules in Arabidopsis thaliana
Cited by: 57
Author(s): Susan Duncan, Tjelvar S. G. Olsson, Matthew Hartley, Caroline Dean, Stefanie Rosa
Software Mentions: 1
Published: over 8 years ago

10.1371/journal.pcbi.1006588

Cytoplasmic flows in starfish oocytes are fully determined by cortical contractions
Cited by: 32
Author(s): Nils Klughammer, Johanna Bischof, Nikolas D. Schnellbächer, A. Callegari, Péter Lénárt, Ulrich S. Schwarz
Software Mentions: 1
Published: about 6 years ago

10.1016/j.pacs.2020.100203

A sparse deep learning approach for automatic segmentation of human vasculature in multispectral optoacoustic tomography
Cited by: 21
Author(s): Nikolaos-Kosmas Chlis, Angelos Karlas, Nikolina‐Alexia Fasoula, Michael Kallmayer, Hans‐Henning Eckstein, Fabian J. Theis, Vasilis Ntziachristos, Carsten Marr
Software Mentions: 1
Published: almost 4 years ago

10.1371/journal.pgen.1009533

Microtubule associated protein WAVE DAMPENED2-LIKE (WDL) controls microtubule bundling and the stability of the site of tip-growth in Marchantia polymorpha rhizoids
Cited by: 8
Author(s): Clément Champion, Jasper Lamers, Victor Arnold Shivas Jones, Giulia Morieri, Suvi Honkanen, Liam Dolan
Software Mentions: 1
Published: over 3 years ago

10.1371/journal.pone.0177920

Visualization of early influenza A virus trafficking in human dendritic cells using STED microscopy
Cited by: 14
Author(s): Faezzah Baharom, Oliver S. Thomas, Rico Lepzien, Ira Mellman, Cécile Chalouni, Anna Smed‐Sörensen
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pone.0228962

ChronoMID—Cross-modal neural networks for 3-D temporal medical imaging data
Cited by: 0
Author(s): Alexander Rakowski, Petar Veličković, Enrico Dall’Ara, Píetro Lió
Software Mentions: 1
Published: over 4 years ago

10.1371/journal.pone.0087351

Automated Detection of Synapses in Serial Section Transmission Electron Microscopy Image Stacks
Cited by: 60
Author(s): Anna Kreshuk, Ullrich Koethe, Elizabeth Pax, Davi D. Bock, Fred A. Hamprecht
Software Mentions: 1
Published: almost 11 years ago

10.1371/journal.pone.0254051

A semi-analytical solution and AI-based reconstruction algorithms for magnetic particle tracking
Cited by: 4
Author(s): Huixuan Wu, Pan Du, Rohan Kokate, Jianxun Wang
Software Mentions: 1
Published: over 3 years ago

10.1371/journal.pone.0198705

Automated high-throughput light-sheet fluorescence microscopy of larval zebrafish
Cited by: 18
Author(s): Savannah L. Logan, Christopher Dudley, Ryan Baker, Michael J. Taormina, Edouard A. Hay, Raghuveer Parthasarathy
Software Mentions: 1
Published: about 6 years ago

10.1371/journal.pone.0252824

Towards sustainable demersal fisheries: NepCon image acquisition system for automatic Nephrops norvegicus detection
Cited by: 9
Author(s): Maria Sokolova, Fletcher Thompson, Patrizio Mariani, Ludvig Ahm Krag
Software Mentions: 1
Published: over 3 years ago

10.3390/cancers11111805

Imaging Collagen Alterations in STICs and High Grade Ovarian Cancers in the Fallopian Tubes by Second Harmonic Generation Microscopy
Cited by: 17
Author(s): Eric C. Rentchler, Kristal L Gant, Ronny Drapkin, Manish S. Patankar, Paul J. Campagnola
Software Mentions: 1
Published: about 5 years ago

10.3390/metabo11060363

Machine Learning Algorithms, Applied to Intact Islets of Langerhans, Demonstrate Significantly Enhanced Insulin Staining at the Capillary Interface of Human Pancreatic β Cells
Cited by: 3
Author(s): Louise Cottle, Ian Gilroy, Kylie Deng, Thomas Loudovaris, Helen E. Thomas, Anthony J. Gill, Jaswinder S. Samra, Melkam A. Kebede, Jin Man Kim, Peter Thorn
Software Mentions: 1
Published: over 3 years ago

10.1038/s42003-021-02126-w

Super-resolution imaging reveals α-synuclein seeded aggregation in SH-SY5Y cells
Cited by: 21
Author(s): Jason C. Sang, Eric Hidari, Georg Meisl, Rohan T. Ranasinghe, Maria Grazia Spillantini, David Klenerman
Software Mentions: 1
Published: over 3 years ago

10.1107/S160057751900660X

A versatile nanoreactor for complementary in situ X-ray and electron microscopy studies in catalysis and materials science
Cited by: 19
Author(s): Yakub Fam, Thomas L. Sheppard, Johannes Becher, Dennis Scherhaufer, Heinz Lambach, S. Kulkarni, Thomas F. Keller, Arne Wittstock, Felix Wittwer, Martin Seyrich, Dennis Brueckner, Maik Kahnt, Xiaogang Yang, Andreas Schropp, Andreas Stierle, Christian G. Schroer, Jan‐Dierk Grunwaldt
Software Mentions: 1
Published: about 5 years ago

10.1016/j.csbj.2021.08.033

HistoClean: Open-source software for histological image pre-processing and augmentation to improve development of robust convolutional neural networks
Cited by: 5
Author(s): Kris McCombe, Stephanie G. Craig, Amélie Viratham Pulsawatdi, Javier I Quezada-Marín, Matthew Hagan, Simon Rajendran, Matthew P. Humphries, Victoria Bingham, Manuel Salto-Tellez, Richard Gault, Jacqueline James
Software Mentions: 1
Published: almost 4 years ago

10.1242/dev.175141

Cdk8 is required for establishment of H3K27me3 and gene repression by Xist and mouse development
Cited by: 18
Author(s): Andreas Postlmayr, Charles-Étienne Dumeau, Anton Wutz
Software Mentions: 1
Published: almost 5 years ago

10.3389/fbioe.2020.00336

Primary Human Osteoblasts Cultured in a 3D Microenvironment Create a Unique Representative Model of Their Differentiation Into Osteocytes
Cited by: 35
Author(s): Gabriele Nasello, Pilar Alamán‐Díez, Jessica Schiavi, M.Á. Pérez, Laoise M. McNamara, J.M. García-Aznar
Software Mentions: 1
Published: over 4 years ago

10.3389/fncel.2016.00290

FUS Mislocalization and Vulnerability to DNA Damage in ALS Patients Derived hiPSCs and Aging Motoneurons
Cited by: 57
Author(s): Julia Higelin, Maria Demestre, Stefan Putz, Jan Philipp Delling, Christian Jacob, Anne-Kathrin Lutz, Julia Bausinger, Ann-Kathrin Huber, Moritz Klingenstein, Gotthold Barbi, Günter Speit, Annemarie Huebers, Jochen H. Weishaupt, Andreas Hermann, Stefan Liebau, Albert C. Ludolph, Tobias M. Boeckers
Software Mentions: 1
Published: almost 8 years ago

10.1038/s41377-020-0255-6

An ultra-compact particle size analyser using a CMOS image sensor and machine learning
Cited by: 21
Author(s): Rubaiya Hussain, Mehmet Alican Noyan, Getinet Woyessa, Rodrigo Renato Retamal Marín, P.A. Martínez, Faiz M. Mahdi, Vittoria Finazzi, T Hazlehurst, Timothy N. Hunter, Tomeu Coll, Michael Stintz, Frans L. Muller, Georgios Chalkias, Valerio Pruneri
Software Mentions: 1
Published: almost 5 years ago

10.3389/fpls.2016.02057

Leaf Segmentation and Tracking in Arabidopsis thaliana Combined to an Organ-Scale Plant Model for Genotypic Differentiation
Cited by: 18
Author(s): G Viaud, Olivier Loudet, Paul-Henry Cournède
Software Mentions: 1
Published: almost 8 years ago

10.1364/BOE.9.003678

High speed functional imaging with source localized multifocal two-photon microscopy
Cited by: 7
Author(s): Peter Quicke, Stephanie Reynolds, Mark A. A. Neil, Thomas Knöpfel, Simon R. Schultz, Amanda J. Foust
Software Mentions: 1
Published: over 6 years ago

10.1109/TMI.2021.3075856

Results of the 2020 fastMRI Challenge for Machine Learning MR Image Reconstruction
Cited by: 94
Author(s): Matthew J. Muckley, Bruno Riemenschneider, Alireza Radmanesh, Sunwoo Kim, Geunu Jeong, Jingyu Ko, Yohan Jun, Hyungseob Shin, Dosik Hwang, Mahmoud Mostapha, Simon Arberet, Dominik Nickel, Zaccharie Ramzi, Philippe Ciuciu, Jean-Luc Starck, Jonas Teuwen, Dimitrios Karkalousos, Chaoping Zhang, Anuroop Sriram, Zhengnan Huang, Nafissa Yakubova, Yvonne W. Lui, Florian Knoll
Software Mentions: 1
Published: about 3 years ago

10.1117/1.JBO.25.11.116010

Integrating photoacoustic tomography into a multimodal automated breast ultrasound scanner
Cited by: 2
Author(s): Corey J. Kelly, Amir Refaee, Septimiu E. Salcudean
Software Mentions: 1
Published: about 4 years ago

10.1117/1.JBO.26.8.086005

Surface kinematic and depth-resolved analysis of human vocal folds in vivo during phonation using optical coherence tomography
Cited by: 5
Author(s): Giriraj K. Sharma, Lily Y. Chen, Li-Dek Chou, Christopher Badger, Ellen M Hong, Swathi Rangarajan, Theodore H. Chang, William B. Armstrong, Sunil P. Verma, Zhongping Chen, Ram Ramalingam, Brian J. F. Wong
Software Mentions: 1
Published: over 3 years ago

10.3390/jcm8081159

Phasetime: Deep Learning Approach to Detect Nuclei in Time Lapse Phase Images
Cited by: 10
Author(s): Pengyu Yuan, Ali Rezvan, Xiaoyang Li, Navin Varadarajan, Hien Van Nguyen
Software Mentions: 1
Published: over 5 years ago

10.1093/jxb/erz027

Revealing the hierarchy of processes and time-scales that control the tropic response of shoots to gravi-stimulations
Cited by: 24
Author(s): Hugo Chauvet, Valerie Legue;, Valérie Legué, Yoël Forterre, Olivier Pouliquen
Software Mentions: 1
Published: over 5 years ago

10.1098/rsos.170111

Robust extraction of quantitative structural information from high-variance histological images of livers from necropsied Soay sheep
Cited by: 1
Author(s): Quentin Caudron, Romain Garnier, J.C. Pilkington, Kathryn Watt, Christina Hansen, B. T. Grenfell, Tawfik Aboellail, Andrea L. Graham
Software Mentions: 1
Published: over 7 years ago

10.1098/rsos.201663

Face coverings and respiratory tract droplet dispersion
Cited by: 31
Author(s): Lucia Bandiera, Geethanjali Pavar, Gabriele Pisetta, Shūji Ōtomo, Enzo Mangano, Jonathan R. Seckl, Paul Digard, Emanuela Molinari, Filippo Menolascina, Ignazio Maria Viola
Software Mentions: 1
Published: almost 4 years ago

10.1155/2021/5511618

Scanning Electron Microscopy versus Transmission Electron Microscopy for Material Characterization: A Comparative Study on High-Strength Steels
Cited by: 7
Author(s): Nicolas Brodusch, S. Brahimi, Evelin Barbosa de Mélo, Jun Song, Stephen Yue, Nicolas Piché, Raynald Gauvin
Software Mentions: 1
Published: over 3 years ago

10.1038/s41598-019-46567-0

MMHelper: An automated framework for the analysis of microscopy images acquired with the mother machine
Cited by: 32
Author(s): Ashley Smith, Jeremy Metz, Stefano Pagliara
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-019-54507-1

Siloxane-functionalised surface patterns as templates for the ordered deposition of thin lamellar objects
Cited by: 5
Author(s): Julian Hoffmann, Sofía Madrigal Gamboa, Andreas Hofmann, Hartmut Gliemann, Alexander Welle, Irene Wacker, Rasmus R. Schröder, Len Ness, Veit Hagenmeyer, Ulrich Gengenbach
Software Mentions: 1
Published: almost 5 years ago

10.1038/s41598-019-56885-y

Confinement Effect on Porosity and Permeability of Shales
Cited by: 49
Author(s): Jan Goral, Palash Panja, Milind Deo, Matthew Andrew, Sven Linden, Jens-Oliver Schwarz, Andreas Wiegmann
Software Mentions: 1
Published: almost 5 years ago

10.1038/s41598-020-59932-1

Analysis tools to quantify dissemination of pathology in zebrafish larvae
Cited by: 13
Author(s): David R. Stirling, Oniz Suleyman, Eliza Gil, Philip M. Elks, Vincenzo Torraca, Mahdad Noursadeghi, Gillian S. Tomlinson
Software Mentions: 1
Published: over 4 years ago

10.1038/s41598-020-77459-3

A physical unclonable neutron sensor for nuclear arms control inspections
Cited by: 1
Author(s): Sébastien Philippe, Francesco D’Errico
Software Mentions: 1
Published: almost 4 years ago

10.1038/s41598-020-78061-3

VISTA: VIsual Semantic Tissue Analysis for pancreatic disease quantification in murine cohorts
Cited by: 6
Author(s): Luke Ternes, Ge Huang, Christian Lanciault, Guillaume Thibault, Rachelle Riggers, Joe W. Gray, John Muschler, Young Hwan Chang
Software Mentions: 1
Published: almost 4 years ago

10.1038/s41598-020-78130-7

Multiscale 3D phenotyping of human cerebral organoids
Cited by: 43
Author(s): Alexandre Albanese, Justin Swaney, Dae Hee Yun, Nicholas B. Evans, Jenna M. Antonucci, Silvia Velasco, Chang Ho Sohn, Paola Arlotta, Lee Gehrke, Kwanghun Chung
Software Mentions: 1
Published: almost 4 years ago

10.1093/bioinformatics/btz774

Domain-invariant features for mechanism of action prediction in a multi-cell-line drug screen
Cited by: 5
Author(s): Joseph Boyd, Alice Pinheiro, Elaine Del Nery, Fabien Reyal, Thomas Walter
Software Mentions: 1
Published: about 5 years ago

10.1038/s41598-021-82687-2

Experimental demonstration of novel beam characterization using a polarizable X-band transverse deflection structure
Cited by: 6
Author(s): Barbara Marchetti, Alexej Grudiev, P. Craievich, Ralph Aßmann, H. Braun, Nuria Catalán Lasheras, Florian Christie, Richard D’Arcy, R. Fortunati, R. Ganter, Pau González Caminal, M. Hoffmann, M. Huening, Sonja Jaster-Merz, R. Jonas, F. Marcellini, Daniel Marx, Gerard McMonagle, Jens Osterhoff, M. Pedrozzi, Eduard Prat, S. Reiche, Matthias Reukauff, S. Schreiber, G. Tews, Mathias Vogt, S. Wesch, Walter Wuensch
Software Mentions: 1
Published: almost 4 years ago

10.1038/s41598-020-77300-x

Imaging atelectrauma in Ventilator-Induced Lung Injury using 4D X-ray microscopy
Cited by: 11
Author(s): Luca Fardin, Ludovic Broche, Goran Lovrić, Alberto Mittone, Olivier Stephanov, Anders Larsson, Alberto Bravin, Sam Bayat
Software Mentions: 1
Published: almost 4 years ago

10.1038/s41598-021-87857-w

Investigating the relationship between diffusion kurtosis tensor imaging (DKTI) and histology within the normal human brain
Cited by: 4
Author(s): Ahmed Maiter, Frank Riemer, Kieren Allinson, Fulvio Zaccagna, Mireia Crispín-Ortuzar, Marcel Gehrung, Mary A. McLean, Andrew N. Priest, James T. Grist, Tomasz Matys, Martin J. Graves, Ferdia A. Gallagher
Software Mentions: 1
Published: over 3 years ago

10.3390/s20185432

A Class-Independent Texture-Separation Method Based on a Pixel-Wise Binary Classification
Cited by: 2
Author(s): Lucas de Assis Soares, Klaus Fabian Côco, Patrick Marques Ciarelli, Evandro Ottoni Teatini Salles
Software Mentions: 1
Published: about 4 years ago

10.3390/s21155192

Classification of Approximal Caries in Bitewing Radiographs Using Convolutional Neural Networks
Cited by: 21
Author(s): Maira Beatriz Hernández Morán, Marcelo Daniel Brito Faria, Gilson A. Giraldi, Luciana Freitas Bastos, Larissa Oliveira, Aura Conci
Software Mentions: 1
Published: over 3 years ago

10.1128/mBio.01173-20

The RNase J-Based RNA Degradosome Is Compartmentalized in the Gastric Pathogen Helicobacter pylori
Cited by: 9
Author(s): Alejandro Tejada-Arranz, Eloïse Galtier, Lamya El Mortaji, Évelyne Turlin, Dmitry Ershov, Hilde De Reuse
Software Mentions: 1
Published: about 4 years ago

10.1161/HYPERTENSIONAHA.119.13791

Increased Vascular Contractility in Hypertension Results From Impaired Endothelial Calcium Signaling
Cited by: 48
Author(s): Calum Wilson, Xun Zhang, Charlotte Buckley, Helen R. Heathcote, Matthew D. Lee, John G. McCarron
Software Mentions: 1
Published: about 5 years ago

10.1007/s11548-015-1252-8

A fluoroscopy-based planning and guidance software tool for minimally invasive hip refixation by cement injection
Cited by: 4
Author(s): D.F. Malan, Stéfan J. van der Walt, Renata Georgia Raidou, Bas van den Berg, Berend C. Stoel, Charl P. Botha, Rob G H H Nelissen, Edward R. Valstar
Software Mentions: 1
Published: over 9 years ago

10.3390/jimaging6070057

Analyzing Age-Related Macular Degeneration Progression in Patients with Geographic Atrophy Using Joint Autoencoders for Unsupervised Change Detection
Cited by: 6
Author(s): Guillaume Dupont, Ekaterina Kalinicheva, Jérémie Sublime, Florence Rossant, Michel Pâques
Software Mentions: 1
Published: over 4 years ago

10.1088/1361-6420/ac104f

Equivariant neural networks for inverse problems
Cited by: 8
Author(s): Elena Celledoni, Matthias J. Ehrhardt, Christian Etmann, Brynjulf Owren, Carola-Bibiane Schönlieb, Ferdia Sherry
Software Mentions: 1
Published: over 3 years ago

10.1186/s12859-021-04245-x

Application of convolutional neural networks towards nuclei segmentation in localization-based super-resolution fluorescence microscopy images
Cited by: 6
Author(s): Christopher A. Mela, Yang Liu
Software Mentions: 1
Published: over 3 years ago

10.7554/eLife.14472

A large field of view two-photon mesoscope with subcellular resolution for in vivo imaging
Cited by: 461
Author(s): Nicholas Sofroniew, Daniel Flickinger, James Ferguson King, Karel Svoboda
Software Mentions: 1
Published: over 8 years ago

10.7554/eLife.66898

Electrical synaptic transmission requires a postsynaptic scaffolding protein
Cited by: 21
Author(s): Abagael M Lasseigne, Alberto E. Pereda, Sundas Ijaz, Jennifer Carlisle Michel, Elizabeth A. Martin, Audrey J. Marsh, E. Trujillo, Kurt C. Marsden, Alberto E. Pereda, Adam C. Miller
Software Mentions: 1
Published: over 3 years ago

10.7554/eLife.58251

Zebrafish Posterior Lateral Line primordium migration requires interactions between a superficial sheath of motile cells and the skin
Cited by: 14
Author(s): Damian E. Dalle Nogare, Naveen Natesh, Harshad D. Vishwasrao, Hari Shroff, Ajay B. Chitnis
Software Mentions: 1
Published: almost 4 years ago

10.7554/eLife.36045

Spatiotemporal mosaic self-patterning of pluripotent stem cells using CRISPR interference
Cited by: 26
Author(s): Ashley R.G. Libby, David A Joy, Po-Lin So, Mohammad A. Mandegar, Jonathon M. Muncie, Federico N Mendoza-Camacho, Valerie M. Weaver, Bruce R. Conklin, Todd C. McDevitt
Software Mentions: 1
Published: about 6 years ago

10.7554/eLife.24350

Control of lipid domain organization by a biomimetic contractile actomyosin cortex
Cited by: 40
Author(s): Sven Vogel, Ferdinand Greiss, Alena Khmelinskaia, Petra Schwille
Software Mentions: 1
Published: over 7 years ago

10.7554/eLife.42253

The ULK1-FBXW5-SEC23B nexus controls autophagy
Cited by: 60
Author(s): Yeon Tae Jeong, Daniele Simoneschi, Sarah Keegan, D. Melville, Natalia S. Adler, Anita Saraf, Laurence Florens, Michael P. Washburn, Claudio N. Cavasotto, David Fenyö, Ana María Cuervo, Mario Rossi, Michele Pagano
Software Mentions: 1
Published: almost 6 years ago

10.1186/s12859-016-1072-z

Joint analysis of histopathology image features and gene expression in breast cancer
Cited by: 19
Author(s): Vlad Popovici, Eva Budínská, Lenka Čápková, Daniel Schwarz, Ladislav Dušek, Josef Feit, Rolf Jaggi
Software Mentions: 1
Published: over 8 years ago

10.21105/joss.01063

3D ultrasound file reading and coordinate transformations
Cited by: 1
Author(s): Pádraig Looney, Gordon N. Stevenson, Sally Collins
Software Mentions: 1
Published: almost 6 years ago

10.3390/jpm11060524

Accuracy of a Machine-Learning Algorithm for Detecting and Classifying Choroidal Neovascularization on Spectral-Domain Optical Coherence Tomography
Cited by: 4
Author(s): Andreas Maunz, Fethallah Benmansour, Yvonna Li, Thomas Albrecht, Yanping Zhang, Filippo Arcadu, Yalin Zheng, Savita Madhusudhan, Jayashree Sahni
Software Mentions: 1
Published: over 3 years ago

10.1186/s13007-020-0563-0

Segmentation of roots in soil with U-Net
Cited by: 80
Author(s): Abraham George Smith, Jens Petersen, Raghavendra Selvan, Camilla Ruø Rasmussen
Software Mentions: 1
Published: almost 5 years ago

Projects: pypi: scikit-image

Papers Mentioning scikit-image 195