Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: pypi: qqman

https://packages.ecosyste.ms/registries/pypi.org/packages/qqman

Draws Manhattan plot and QQ plot using plink assoc output.
7 versions
Latest release: over 4 years ago
36 downloads last month

Papers Mentioning qqman 273

10.3389/fpsyt.2020.564239
Genome-Wide Association Study of Smoking Behavior Traits in a Chinese Han Population
Cited by: 5
Author(s): Meng Li, Ying Chen, Jianhua Yao, Sheming Lu, Ying Guan, Yuqiong Xu, Qiang Liu, Silong Sun, Qi-Li Mi, Junpu Mei, Xuemei Li, Miao Ming-ming, Shancen Zhao, Zhouhai Zhu
Software Mentions: 3
Published: about 4 years ago
10.1016/j.ajhg.2021.06.002
Common haplotypes at the CFH locus and low-frequency variants in CFHR2 and CFHR5 associate with systemic FHR concentrations and age-related macular degeneration
Cited by: 25
Author(s): Laura Lorés‐Motta, Anna E. van Beek, Esther Willems, Judith Zandstra, Gerard van Mierlo, Alfred Einhaus, Jean-Luc Mary, Corinne Stucki, Björn Bakker, Carel B. Hoyng, Sascha Fauser, Simon J. Clark, Marien I. de Jonge, Everson Nogoceke, Elod Koertvely, Ilse Jongerius, Taco W. Kuijpers, Anneke I. den Hollander
Software Mentions: 3
Published: over 3 years ago
10.5713/ajas.18.0319
Genome wide association study on feed conversion ratio using imputed sequence data in chickens
Cited by: 2
Author(s): Jiaying Wang, Xiaolong Yuan, Shaopan Ye, Shuwen Huang, Yingting He, Hao Zhang, Jiaqi Li, Xiquan Zhang, Zhe Zhang
Software Mentions: 3
Published: about 6 years ago
10.1186/s12863-016-0363-8
Genome-wide association analysis of milk yield traits in Nordic Red Cattle using imputed whole genome sequence variants
Cited by: 66
Author(s): Terhi Iso-Touru, Goutam Sahana, Bernt Guldbrandtsen, Mogens Sandø Lund, Johanna Vilkki
Software Mentions: 3
Published: over 8 years ago
10.1186/s12864-021-07835-4
Investigating the genetic architecture of disease resilience in pigs by genome-wide association studies of complete blood count traits collected from a natural disease challenge model
Cited by: 3
Author(s): Xue Bai, Tong Yang, Austin M. Putz, Zhiquan Wang, Changxi Li, Frédéric Fortin, John C. S. Harding, Michael K. Dyck, Jack C. M. Dekkers, Catherine J. Field, Graham Plastow
Software Mentions: 3
Published: over 3 years ago
10.1186/s12864-020-07331-1
Genome-wide association mapping reveals potential novel loci controlling stripe rust resistance in a Chinese wheat landrace diversity panel from the southern autumn-sown spring wheat zone
Cited by: 16
Author(s): Yuqi Wang, Changyong Yu, Yukun Cheng, Fangjie Yao, Long Li, Yu Wu, Jing Li, Hao Li, Jirui Wang, Qiantao Jiang, Wei Li, Zhien Pu, Pengfei Qi, Jian Ma, Mei Deng, Yuming Wei, Xianming Chen, Guoyue Chen, Houyang Kang, Yunfeng Jiang, Yu Zheng
Software Mentions: 3
Published: almost 4 years ago
10.1186/s12864-018-5086-y
Genome-wide association study of agronomic traits in rice cultivated in temperate regions
Cited by: 14
Author(s): Juan Luis Reig-Valiente, Luis Marqués, Manuel Talón, Concha Domingo
Software Mentions: 3
Published: about 6 years ago
10.1186/s12864-019-6170-7
Unraveling the genetic architecture for carbon and nitrogen related traits and leaf hydraulic conductance in soybean using genome-wide association analyses
Cited by: 8
Author(s): Clinton J. Steketee, Thomas R. Sinclair, Mandeep K. Riar, William T. Schapaugh, Zenglu Li
Software Mentions: 3
Published: about 5 years ago
10.1186/s12864-018-4698-6
Familial resemblances in human whole blood transcriptome
Cited by: 5
Author(s): Bénédicte L. Tremblay, Frédéric Guénard, Benoı̂t Lamarche, Louis Pérusse, Marie‐Claude Vohl
Software Mentions: 3
Published: over 6 years ago
10.1186/s12864-017-4062-2
High-density 80 K SNP array is a powerful tool for genotyping G. hirsutum accessions and genome analysis
Cited by: 71
Author(s): Caiping Cai, Guozhong Zhu, Tianzhen Zhang, Wenshan Guo
Software Mentions: 3
Published: over 7 years ago
10.1186/s12881-019-0830-y
Identification of female-specific genetic variants for metabolic syndrome and its component traits to improve the prediction of metabolic syndrome in females
Cited by: 14
Author(s): Sokanha Kong, Yoon Shin Cho
Software Mentions: 3
Published: over 5 years ago
10.1093/bioinformatics/btz944
PheGWAS: a new dimension to visualize GWAS across multiple phenotypes
Cited by: 10
Author(s): Gittu George, Sushrima Gan, Yu Huang, Philip Appleby, Aditya Nar, Radha Venkatesan, Viswanathan Mohan, Colin N.A. Palmer, Alex S.F. Doney
Software Mentions: 3
Published: almost 5 years ago
10.3390/biom9080321
Genome-Wide Association Study of Metabolic Syndrome Reveals Primary Genetic Variants at CETP Locus in Indians
Cited by: 12
Author(s): Gauri Prasad, Khushdeep Bandesh, Anil Giri, Yasmeen Kauser, Prakriti Chanda, Vaisak Parekatt, Indico, Sandeep Kumar Mathur, Sri Venkata Madhu, Pradeep Venkatesh, Anil Bhansali, Raman K. Marwaha, Analabha Basu, Nikhil Tandon, Dwaipayan Bharadwaj
Software Mentions: 3
Published: over 5 years ago
10.1002/mgg3.429
Exome sequencing of 85 Williams–Beuren syndrome cases rules out coding variation as a major contributor to remaining variance in social behavior
Cited by: 8
Author(s): Nathan Kopp, Phoebe C. R. Parrish, Michael Lugo, Joseph D. Dougherty, Beth A. Kozel
Software Mentions: 3
Published: over 6 years ago
10.18699/VJ20.612
Whole-genome association studies of distribution of developmental abnormalities and other breeding-valuable qualitative traits in offspring of the Russian large-white boars
Cited by: 4
Author(s): А А Траспов, О В Костюнина, А. А. Белоус, Т. В. Карпушкина, Н А Свеженцева, Н. А. Зиновьева
Software Mentions: 3
Published: over 4 years ago
10.1111/pbi.13100
The genetic basis of drought tolerance in the high oil crop <i>Sesamum indicum</i>
Cited by: 59
Author(s): Komivi Dossa, Donghua Li, Rong Zhou, Jingyin Yu, Linhai Wang, Yanxin Zhang, Jun You, Aili Liu, Marie Ali Mmadi, Daniel Foncéka, Diaga Diouf, Ndiaga Cissé, Xin Wei
Software Mentions: 3
Published: over 5 years ago
10.1111/pbi.13112
Comparative population genomics identified genomic regions and candidate genes associated with fruit domestication traits in peach
Cited by: 47
Author(s): Ke Cao, Yong Li, Cecilia Deng, Susan E. Gardiner, Guoqiang Zhu, Weichao Fang, Chang Wen Chen, Xinwei Wang, Lirong Wang
Software Mentions: 3
Published: over 5 years ago
10.1371/journal.pbio.2002458
Identifying genetic variants that affect viability in large cohorts
Cited by: 65
Author(s): Hakhamanesh Mostafavi, Tomaz Berisa, Felix R. Day, John R. B. Perry, Molly Przeworski, Joseph K. Pickrell
Software Mentions: 3
Published: about 7 years ago
10.1371/journal.pgen.1006710
A chromosome 5q31.1 locus associates with tuberculin skin test reactivity in HIV-positive individuals from tuberculosis hyper-endemic regions in east Africa
Cited by: 27
Author(s): Rafal S. Sobota, Catherine M. Stein, Nuri Kodaman, Isaac Maro, Wendy Wieland-Alter, Robert P. Igo, Albert Magohe, La Shaunda L. Malone, Keith Chervenak, Noémi B. Hall, Mecky Matee, Harriet Mayanja‐Kizza, Moses Joloba, Jason H. Moore, William K. Scott, Timothy Lahey, W. Henry Boom, C. Fordham von Reyn, Scott M. Williams, Giorgio Sirugo
Software Mentions: 3
Published: over 7 years ago
10.1371/journal.pgen.1007264
MKLN1 splicing defect in dogs with lethal acrodermatitis
Cited by: 26
Author(s): Anina Bauer, Vidhya Jagannathan, Sandra Högler, Barbara Richter, Neil McEwan, Anne Thomas, Édouard Cadieu, Catherine André, Marjo K. Hytönen, Hannes Lohi, Monika Maria Welle, Petra Roosje, Cathryn S. Mellersh, Margret L. Casal, Tosso Leeb
Software Mentions: 3
Published: over 6 years ago
10.1371/journal.pgen.1008416
A RAPGEF6 variant constitutes a major risk factor for laryngeal paralysis in dogs
Cited by: 4
Author(s): Sheida Hadji Rasouliha, Laura Soledad Barrientos, Linda Anderegg, Carina Klesty, Jessica Lorenz, Lucie Chevallier, Vidhya Jagannathan, Sarah Rösch, Tosso Leeb
Software Mentions: 3
Published: about 5 years ago
10.1371/journal.pone.0227212
Selection in Australian Thoroughbred horses acts on a locus associated with early two-year old speed
Cited by: 10
Author(s): Haitang Han, Beatrice A. McGivney, Gabriella Farries, Lisa Katz, David E. MacHugh, Imtiaz A. S. Randhawa, E. W. Hill
Software Mentions: 3
Published: almost 5 years ago
10.1371/journal.pone.0249997
Genome-wide association study of antipsychotic-induced sinus bradycardia in Chinese schizophrenia patients
Cited by: 3
Author(s): Saizheng Weng, Bo Wang, Mo Li, Shan Chao, Lin Rui-qian, Rongyan Zheng, Yun William Yu, Shaonan Guo, Xianhao Lin
Software Mentions: 3
Published: over 3 years ago
10.1371/journal.pone.0112755
Identification of Novel Genetic Risk Loci in Maltese Dogs with Necrotizing Meningoencephalitis and Evidence of a Shared Genetic Risk across Toy Dog Breeds
Cited by: 28
Author(s): Isabelle Schrauwen, Renee M. Barber, Scott J. Schatzberg, Ashley L. Siniard, Jason J. Corneveaux, Brian F. Porter, Karen M. Vernau, Rebekah I. Keesler, Kaspar Matiasek, Thomas Flegel, Andrew D. Miller, Teresa Southard, Christopher L. Mariani, Gayle C. Johnson, Matthew J. Huentelman
Software Mentions: 3
Published: about 10 years ago
10.1186/s13148-021-01081-x
Assessment of differentially methylated loci in individuals with end-stage kidney disease attributed to diabetic kidney disease: an exploratory study
Cited by: 25
Author(s): Laura Smyth, Jill Kilner, Viji Nair, H. Liu, Eoin Brennan, Katie Kerr, Niina Sandholm, Joanne B. Cole, Erika B. Parente, Anna Syreeni, Rany M. Salem, Robert G. Nelson, Helen C. Looker, Christopher Wooster, Kerry Anderson, Gareth J. McKay, Frank Kee, Ian S. Young, Darrell Andrews, Carol Forsblom, Joel N. Hirschhorn, Catherine Godson, Per‐Henrik Groop, Alexander P. Maxwell, Katalin Suszták, Matthias Kretzler, José C. Florez, Amy Jayne McKnight
Software Mentions: 3
Published: over 3 years ago
10.1038/s42003-021-02416-3
A combined GWAS approach reveals key loci for socially-affected traits in Yorkshire pigs
Cited by: 8
Author(s): Pingxian Wu, Kai Wang, Jie Zhou, Dejuan Chen, Anan Jiang, Yanzhi Jiang, Li Zhu, Xiaotian Qiu, Xuewei Li, Guoqing Tang
Software Mentions: 3
Published: over 3 years ago
10.1093/emph/eoz015
Genome-wide association analysis uncovers variants for reproductive variation across dog breeds and links to domestication
Cited by: 6
Author(s): Samuel Pattillo Smith, Julie Baker Phillips, Maddison L Johnson, Patrick Abbot, John A. Capra, Antonis Rokas
Software Mentions: 3
Published: almost 6 years ago
10.3389/fgene.2021.639905
Association Between Environmental Factors and Asthma Using Mendelian Randomization: Increased Effect of Body Mass Index on Adult-Onset Moderate-to-Severe Asthma Subtypes
Cited by: 6
Author(s): Tae‐Woong Ha, Hae-Un Jung, Dong Jun Kim, Eun Ju Baek, Wonjun Lee, Ji Eun Lim, Han-Kyul Kim, Ji‐One Kang, Bermseok Oh
Software Mentions: 3
Published: over 3 years ago
10.3389/fgene.2021.672304
Association Analysis of Candidate Variants in Admixed Brazilian Patients With Genetic Generalized Epilepsies
Cited by: 1
Author(s): Felipe S. Kaibara, Tânia Kawasaki de Araujo, Patrícia Aline Oliveira Ribeiro de Aguiar Araújo, Marina K. M. Alvim, Clarissa Lin Yasuda, Fernando Cendes, Íscia Lopes‐Cendes, Rodrigo Secolin
Software Mentions: 3
Published: over 3 years ago
10.3389/fgene.2021.667038
Genome-Wide Association Study Reveals Candidate Genes for Flowering Time in Cowpea (Vigna unguiculata [L.] Walp.)
Cited by: 15
Author(s): Dev Paudel, Rocheteau Dareus, Julia Rosenwald, María Muñoz‐Amatriaín, Esteban F. Rios
Software Mentions: 3
Published: over 3 years ago
10.3389/fgene.2021.696109
Genome-Wide Association Studies in Indian Buffalo Revealed Genomic Regions for Lactation and Fertility
Cited by: 12
Author(s): Vikas Vohra, Supriya Chhotaray, G. R. Gowane, Rani Alex, Anupama Mukherjee, Archana Verma, S. M. Deb
Software Mentions: 3
Published: about 3 years ago
10.3389/fnhum.2021.669902
Genome-Wide Association Study of Motor Coordination
Cited by: 7
Author(s): Hayley S. Mountford, Amanda Hill, Anna Barnett, Dianne F. Newbury
Software Mentions: 3
Published: over 3 years ago
10.3389/fmed.2020.594769
Genetic Variation in Neisseria meningitidis Does Not Influence Disease Severity in Meningococcal Meningitis
Cited by: 7
Author(s): Philip H. C. Kremer, John A. Lees, Bart Ferwerda, Arie van de Ende, Matthijs C. Brouwer, Stephen D. Bentley, Diederik van de Beek
Software Mentions: 3
Published: about 4 years ago
10.3389/fpls.2018.00868
QTL Identification for Cooking and Eating Quality in indica Rice Using Multi-Parent Advanced Generation Intercross (MAGIC) Population
Cited by: 30
Author(s): Kimberly Ponce, Guoyou Ye, Xiaojing Zhao
Software Mentions: 3
Published: over 6 years ago
10.3389/fpls.2017.01054
Genome-Wide Association Mapping Reveals the Genetic Control Underlying Branch Angle in Rapeseed (Brassica napus L.)
Cited by: 35
Author(s): Hongge Li, Liping Zhang, Jihong Hu, Fugui Zhang, Biyun Chen, Kun Xu, Guizhen Gao, Hao Li, Tianyao Zhang, Zaiyun Li, Xiaoming Wu
Software Mentions: 3
Published: over 7 years ago
10.3389/fpls.2021.712167
Genetic Dissection of Grain Yield Component Traits Under High Nighttime Temperature Stress in a Rice Diversity Panel
Cited by: 3
Author(s): Anuj Kumar, Chirag Gupta, Julie Thomas, Andy Pereira
Software Mentions: 3
Published: about 3 years ago
10.3389/fpls.2019.01263
Identification and Validation of Candidate Genes Involved in Fatty Acid Content in Oil Palm by Genome-Wide Association Analysis
Cited by: 20
Author(s): Wei Xia, Tingting Luo, Yajing Dou, Wei Zhang, Annaliese S. Mason, Dong Huang, Xiaolong Huang, Wenqi Tang, Jihua Wang, Chunyu Zhang, Yong Xiao
Software Mentions: 3
Published: about 5 years ago
10.3389/fpls.2020.00395
Genome-Wide Association Study of Grain Size Traits in Indica Rice Multiparent Advanced Generation Intercross (MAGIC) Population
Cited by: 18
Author(s): Kimberly Ponce, Ya Ping Zhang, Longbiao Guo, Yujia Leng, Guoyou Ye
Software Mentions: 3
Published: over 4 years ago
10.3389/fpls.2018.00380
Genome-Wide Association Study for Identification and Validation of Novel SNP Markers for Sr6 Stem Rust Resistance Gene in Bread Wheat
Cited by: 48
Author(s): Amira M. I. Mourad, Ahmed Sallam, Vikas Belamkar, Stephen N. Wegulo, Robert L. Bowden, Yue Jin, E.E. Mahdy, B. R. Bakheit, Atif Abo El-Wafaa, Jesse Poland, P. Stephen Baenziger
Software Mentions: 3
Published: over 6 years ago
10.1534/g3.119.401016
Genome-Wide Association Analyses Reveal Genomic Regions Controlling Canopy Wilting in Soybean
Cited by: 14
Author(s): Clinton J. Steketee, William T. Schapaugh, Thomas E. Carter, Zenglu Li
Software Mentions: 3
Published: over 4 years ago
10.1534/g3.120.401521
Genome Resequencing, Improvement of Variant Calling, and Population Genomic Analyses Provide Insights into the Seedlessness in the Genus <i>Vitis</i>
Cited by: 4
Author(s): Myung-Shin Kim, Youn Young Hur, Ji Eun Kim, Soon-Chun Jeong
Software Mentions: 3
Published: about 4 years ago
10.1186/s12711-021-00608-3
Identification of QTL regions and candidate genes for growth and feed efficiency in broilers
Cited by: 14
Author(s): Wei Li, Maiqing Zheng, Guiping Zhao, Jie Wang, Jie Liu, Shunli Wang, Furong Feng, Dawei Liu, Dan Zhu, Qinghe Li, Liping Guo, Yuming Guo, Ranran Liu, Jie Wen
Software Mentions: 3
Published: almost 4 years ago
10.1038/s41438-018-0041-2
Genomic signatures of different adaptations to environmental stimuli between wild and cultivated Vitis vinifera L
Cited by: 30
Author(s): Annarita Marrano, Diego Micheletti, Silvia Lorenzi, David B. Neale, S. Grando
Software Mentions: 3
Published: over 6 years ago
10.1038/s41438-020-00441-7
Genomic consequences of apple improvement
Cited by: 42
Author(s): Zoë Migicovsky, Kyle M. Gardner, Christopher M. Richards, Chih-Cheng T. Chao, Heidi Schwaninger, Gennaro Fazio, Gan-Yuan Zhong, Sean Myles
Software Mentions: 3
Published: almost 4 years ago
10.3390/insects12090836
Genome-Wide Association Study Reveals a New Quantitative Trait Locus in Rice Related to Resistance to Brown Planthopper Nilaparvata lugens (Stål)
Cited by: 3
Author(s): Longqing Shi, Meng Dong, Ling Lian, Junian Zhang, Yu Cheng Zhu, Weilong Kong, Liangmiao Qiu, Dawei Liu, Zhengjun Xie, Zhi-Hui Zhan, Zhaoxin Jiang
Software Mentions: 3
Published: about 3 years ago
10.1186/s40104-020-00469-8
New insights into the associations among feed efficiency, metabolizable efficiency traits and related QTL regions in broiler chickens
Cited by: 19
Author(s): Wei Li, Ranran Liu, Maiqing Zheng, Furong Feng, Dawei Liu, Hyewon Lee, Guiping Zhao, Jie Wen
Software Mentions: 3
Published: over 4 years ago
10.1093/jxb/erx017
Deciphering the genetic control of fruit texture in apple by multiple family-based analysis and genome-wide association
Cited by: 50
Author(s): Mario Di Guardo, M.C.A.M. Bink, Walter Guerra, Thomas Letschka, Lidia Lozano, Nicola Busatto, L. Poles, Alice Tadiello, Luca Bianco, Richard G. F. Visser, Eric van de Weg, Fabrizio Costa
Software Mentions: 3
Published: over 7 years ago
10.1038/srep34908
Genomics-assisted characterization of a breeding collection of Apios americana, an edible tuberous legume
Cited by: 19
Author(s): Vikas Belamkar, Andrew Farmer, Nathan T. Weeks, Scott R. Kalberer, W. J. Blackmon, Steven B. Cannon
Software Mentions: 3
Published: about 8 years ago
10.1038/srep36452
A combination of genome-wide association and transcriptome analysis reveals candidate genes controlling harvest index-related traits in Brassica napus
Cited by: 43
Author(s): Kun Lu, Zhongchun Xiao, Hongju Jian, Peng Liu, Cunmin Qu, FU Ming-lian, Bin He, Lin-Mei Tie, Ying Liang, Xiaozheng Xu, Jiana Li
Software Mentions: 3
Published: about 8 years ago
10.1038/srep38673
An integrated genomic approach for the study of mandibular prognathism in the European seabass (Dicentrarchus labrax)
Cited by: 8
Author(s): Massimiliano Babbucci, Serena Ferraresso, Marianna Pauletto, Rafaella Franch, Chiara Papetti, Tomaso Patarnello, Paolo Carnier, Luca Bargelloni
Software Mentions: 3
Published: almost 8 years ago
10.1038/srep45560
Integrating Sequence-based GWAS and RNA-Seq Provides Novel Insights into the Genetic Basis of Mastitis and Milk Production in Dairy Cattle
Cited by: 54
Author(s): Lingzhao Fang, Goutam Sahana, Guosheng Su, Ying Yu, Shengli Zhang, Mogens Sandø Lund, Peter Sørensen
Software Mentions: 3
Published: over 7 years ago
10.1038/s41598-018-22657-3
Haplotype-based allele mining in the Japan-MAGIC rice population
Cited by: 23
Author(s): Daisuke Ogawa, Eiji Yamamoto, Toshikazu Ohtani, Noriko Kanno, Hiroshi Tsunematsu, Yasunori Nonoue, Masahiro Yano, Tetsuro Yamamoto, Jun‐ichi Yonemaru
Software Mentions: 3
Published: over 6 years ago
10.1038/s41598-019-38812-3
New world goat populations are a genetically diverse reservoir for future use
Cited by: 14
Author(s): Tiago do Prado Paim, Danielle Assis de Faria, El Hamidi Hay, Concepta McManus, M. R. Lanari, Laura Chaverri Esquivel, María Isabel Cascante, Esteban Jimenez Alfaro, Argerie Mendez, Olivardo Facó, Kleibe de Moraes Silva, C. A. Mezzadra, A. da S. Mariante, Samuel Rezende Paiva, Harvey D. Blackburn
Software Mentions: 3
Published: almost 6 years ago
10.1038/s41598-019-42654-4
Epigenome-wide Analysis Identifies Genes and Pathways Linked to Neurobehavioral Variation in Preterm Infants
Cited by: 37
Author(s): Todd M. Everson, Carmen J. Marsit, T. Michael O’Shea, Amber Burt, Karen Hermetz, Brian S. Carter, Jennifer Helderman, Julie A. Hofheimer, Elisabeth C. McGowan, Charles R. Neal, Steven L. Pastyrnak, Lynne M. Smith, Antoine Soliman, Sheri A. DellaGrotta, Lynne M. Dansereau, Jamés F. Padbury, Barry M. Lester
Software Mentions: 3
Published: over 5 years ago
10.1038/s41598-019-43336-x
A highly flexible and repeatable genotyping method for aquaculture studies based on target amplicon sequencing using next-generation sequencing technology
Cited by: 28
Author(s): Mana Sato, S. Hosoya, Sota Yoshikawa, Shun Ohki, Yuki Kobayashi, Takuya Itou, Kiyoshi Kikuchi
Software Mentions: 3
Published: over 5 years ago
10.1038/s41598-019-43297-1
Genome-wide association studies for 30 haematological and blood clinical-biochemical traits in Large White pigs reveal genomic regions affecting intermediate phenotypes
Cited by: 39
Author(s): Samuele Bovo, Gianluca Mazzoni, Francesca Bertolini, Giuseppina Schiavo, Giuliano Galimberti, M. Gallo, Stefania Dall’Olio
Software Mentions: 3
Published: over 5 years ago
10.1038/s41598-020-64037-w
Genome Wide Analysis for Growth at Two Growth Stages in A New Fast-Growing Common Carp Strain (Cyprinus carpio L.)
Cited by: 7
Author(s): Shengyan Su, Raouf Bouzoualegh, Xinjin He, Nana Cai, Xinyuan Li, Jie Yu, Jianlin Li, Fan Yu, Meiyao Wang, Yongkai Tang
Software Mentions: 3
Published: over 4 years ago
10.1038/s41598-020-79124-1
Fine scale human genetic structure in three regions of Cameroon reveals episodic diversifying selection
Cited by: 2
Author(s): Kevin Esoh, Tobias O. Apinjoh, Steven Ger Nyanjom, Ambroise Wonkam, Emile R. Chimusa, Lucas Amenga-Etego, Alfred Amambua-Ngwa, Eric A. Achidi
Software Mentions: 3
Published: almost 4 years ago
10.1038/s41598-021-83684-1
Identification of genetic loci affecting body mass index through interaction with multiple environmental factors using structured linear mixed model
Cited by: 1
Author(s): Hae Un Jung, Wonjun Lee, Tae Woong Ha, Ji‐One Kang, Jihye Kim, Mi Kyung Kim, Sungho Won, Taesung Park, Ji Eun Lim, Bermseok Oh
Software Mentions: 3
Published: over 3 years ago
10.1038/s41598-021-85921-z
Genome-wide association study and gene network analyses reveal potential candidate genes for high night temperature tolerance in rice
Cited by: 8
Author(s): Raju Bheemanahalli, Montana S. Knight, Cherryl Quiñones, Colleen J. Doherty
Software Mentions: 3
Published: over 3 years ago
10.1007/s00122-021-03805-2
Population genomics of Mediterranean oat (A. sativa) reveals high genetic diversity and three loci for heading date
Cited by: 8
Author(s): Francisco José Canales, Gracia Montilla-Bascón, Wubishet A. Bekele, Catherine Howarth, Tim Langdon, Nicolás Rispail, Nicholas A. Tinker, Elena Prats
Software Mentions: 3
Published: over 3 years ago
10.1038/s41398-019-0622-3
A large-scale genomic investigation of susceptibility to infection and its association with mental disorders in the Danish population
Cited by: 42
Author(s): Ron Nudel, Yunpeng Wang, Vivek Appadurai, Andrew J. Schork, Alfonso Buil, Esben Agerbo, Jonas Bybjerg‐Grauholm, Anders D. Børglum, Mark J. Daly, Ole Mors, David M. Hougaard, Preben Bo Mortensen, Thomas Werge, Merete Nordentoft, Wesley K. Thompson, Michael E. Benros
Software Mentions: 3
Published: about 5 years ago
10.1038/s41398-020-00951-x
Clustering by phenotype and genome-wide association study in autism
Cited by: 25
Author(s): Akira Narita, Masato Nagai, Satoshi Mizuno, Soichi Ogishima, Gen Tamiya, Masao Ueki, Rieko Sakurai, Satoshi Makino, Taku Obara, Mami Ishikuro, Chizuru Yamanaka, Hiroko Matsubara, Yasutaka Kuniyoshi, Keiko Murakami, Fumihiko Ueno, Aoi Noda, Tomoko Kobayashi, Mika Kobayashi, Takuma Usuzaki, Hisashi Ohseto, Atsushi Hozawa, Masahiro Kikuya, Hirohito Metoki, Shigeo Kure, Shinichi Kuriyama
Software Mentions: 3
Published: over 4 years ago
10.1038/s41398-020-01074-z
Genome-wide association study of Alzheimer’s disease CSF biomarkers in the EMIF-AD Multimodal Biomarker Discovery dataset
Cited by: 34
Author(s): Shengjun Hong, Dmitry Prokopenko, Valerija Dobričić, Fabian Kilpert, Isabelle Bos, Stephanie J.B. Vos, Betty M. Tijms, Ulf Andréasson, Kaj Blennow, Rik Vandenberghe, Isabelle Cleynen, Silvy Gabel, Jolien Schaeverbeke, Philip Scheltens, Charlotte E. Teunissen, Ellis Niemantsverdriet, Sebastiaan Engelborghs, Giovanni B. Frisoni, Olivier Blin, Jill C. Richardson, Régis Bordet, José Luís Molinuevo, Lorena Rami, Petronella Kettunen, Anders Wallin, Alberto Lleó, Isabel Sala, Julius Popp, Gwendoline Peyratout, Pablo Martínez-Lage, Mikel Tainta, Richard Dobson, Cristina Legido‐Quigley, Kristel Sleegers, Christine Van Broeckhoven, Mara ten Kate, Frederik Barkhof, Henrik Zetterberg, Simon Lovestone, Johannes Streffer, Michael Wittig, André Franke, Rudolph E. Tanzi, Pieter Jelle Visser, Lars Bertram
Software Mentions: 3
Published: about 4 years ago
10.1186/s40246-019-0254-y
Delineating significant genome-wide associations of variants with antipsychotic and antidepressant treatment response: implications for clinical pharmacogenomics
Cited by: 6
Author(s): Maria Koromina, Stefania Koutsilieri, George P. Patrinos
Software Mentions: 3
Published: almost 5 years ago
10.1093/hmg/ddy210
Systematic Mendelian randomization framework elucidates hundreds of CpG sites which may mediate the influence of genetic variants on disease
Cited by: 53
Author(s): Tom G Richardson, Philip Haycock, Jie Zheng, Nicholas J. Timpson, Tom R. Gaunt, George Davey Smith, Caroline L Relton, Gibran Hemani
Software Mentions: 3
Published: over 6 years ago
10.1093/hmg/ddz294
Insights into the genetic basis of retinal detachment
Cited by: 24
Author(s): Thibaud Boutin, David G. Charteris, Aman Chandra, Susan Campbell, Caroline Hayward, Archie Campbell, Priyanka Nandakumar, David A. Hinds, Danny Mitry, Véronique Vitart
Software Mentions: 3
Published: almost 5 years ago
10.3390/ijms20235912
Quantitative Trait Module-Based Genetic Analysis of Alzheimer’s Disease
Cited by: 4
Author(s): Shaoxun Yuan, Haitao Li, Jingjing Xie, Xiao Sun
Software Mentions: 3
Published: almost 5 years ago
10.3390/ijms22179249
Genetic Architecture and Genome-Wide Adaptive Signatures Underlying Stem Lenticel Traits in Populus tomentosa
Cited by: 3
Author(s): Peng Li, Jiaxuan Zhou, Dan Wang, Lianzheng Li, Xiao Liang, Mingyang Quan, Wenjie Lu, Liangchen Yao, Yuanyuan Fang, Chenfei Lv, Fangyuan Song, Qingzhang Du, Deqiang Zhang
Software Mentions: 3
Published: about 3 years ago
10.3390/jpm10040193
Association of an APBA3 Missense Variant with Risk of Premature Ovarian Failure in the Korean Female Population
Cited by: 4
Author(s): Jeongman Park, Young-Joon Park, Insong Koh, Nam Keun Kim, Kwang‐Hyun Baek, Bo Hyon Yun, Kyung Ju Lee, Jae Yun Song, Eunil Lee, KyuBum Kwack
Software Mentions: 3
Published: about 4 years ago
10.3390/plants10020242
Preliminary Identification of Key Genes Controlling Peach Pollen Fertility Using Genome-Wide Association Study
Cited by: 1
Author(s): Zhenyu Huang, Fei Shen, Yuling Chen, Ke Cao, Lirong Wang
Software Mentions: 2
Published: almost 4 years ago
10.3389/fvets.2021.693290
Genome-Wide Association Studies Reveal Neurological Genes for Dog Herding, Predation, Temperament, and Trainability Traits
Cited by: 9
Author(s): Shuwen Shan, Fangzheng Xu, Bertram Brenig
Software Mentions: 2
Published: over 3 years ago
10.1111/tpj.15013
<i>OsSYL2</i><i><sup>AA</sup></i>, an allele identified by gene‐based association, increases style length in rice (<i>Oryza sativa</i> L.)
Cited by: 15
Author(s): Xiaojing Dang, Yang Yang, Yuanqing Zhang, Xiangong Chen, Zhilan Fan, Qiangming Liu, Jie Ji, Dalu Li, Yanhui Li, Bingjie Fang, Zexu Wu, Erbao Liu, Xiaoxiao Hu, Shangshang Zhu, Dong She, Hui Wang, Yulong Li, Siqi Chen, Yufeng Wu, Delin Hong
Software Mentions: 2
Published: about 4 years ago
10.1002/mgg3.497
Associations of genetic variants in endocytic trafficking of epidermal growth factor receptor super pathway with risk of nonsyndromic cleft lip with or without cleft palate
Cited by: 11
Author(s): Bing Li, Lan Ma, Chi Zhang, Zixiang Zhou, Hua Yuan, Hongbing Jiang, Yongchu Pan, Qian Tan
Software Mentions: 2
Published: about 6 years ago
10.1111/age.13095
Single‐marker and haplotype‐based genome‐wide association studies for the number of teats in two heavy pig breeds
Cited by: 7
Author(s): Samuele Bovo, Mohamad Ballan, Giuseppina Schiavo, Anisa Ribani, Silvia Tinarelli, Valerio Joe Utzeri, Stefania Dall’Olio, M. Gallo
Software Mentions: 2
Published: over 3 years ago
10.1186/s12863-019-0763-7
GWAS of habitual coffee consumption reveals a sex difference in the genetic effect of the 12q24 locus in the Japanese population
Cited by: 9
Author(s): Huijuan Jia, Shun Nogawa, Kaoru Kawafune, Tsuyoshi Hachiya, Shoko Takahashi, Maki Igarashi, Kenji Saito, Harubumi Kato
Software Mentions: 2
Published: over 5 years ago
10.3390/metabo11010006
The Liability Threshold Model for Predicting the Risk of Cardiovascular Disease in Patients with Type 2 Diabetes: A Multi-Cohort Study of Korean Adults
Cited by: 2
Author(s): Eun Pyo Hong, Seong Gu Heo, Ji Wan Park
Software Mentions: 2
Published: almost 4 years ago
10.3390/life11090921
Genomic and Ancestral Variation Underlies the Severity of COVID-19 Clinical Manifestation in Individuals of European Descent
Cited by: 4
Author(s): Priyanka Upadhyai, G. Kumar Suresh, Rahul Parit, Ranajit Das
Software Mentions: 2
Published: about 3 years ago
10.1186/s40575-020-00091-x
Genome-wide association analysis of idiopathic epilepsy in the Belgian shepherd
Cited by: 6
Author(s): Janelle M. Belanger, Thomas R. Famula, Liza C. Gershony, M. K. Palij, Anita M. Oberbauer
Software Mentions: 2
Published: about 4 years ago
10.3390/genes11010075
Pigment Intensity in Dogs is Associated with a Copy Number Variant Upstream of KITLG
Cited by: 23
Author(s): Kalie M. Weich, Verena K. Affolter, Daniel York, Robert B. Rebhun, Robert A. Grahn, Angelica Kallenberg, Danika L. Bannasch
Software Mentions: 2
Published: almost 5 years ago
10.3390/brainsci8070116
High and Low Levels of an NTRK2-Driven Genetic Profile Affect Motor- and Cognition-Associated Frontal Gray Matter in Prodromal Huntington’s Disease
Cited by: 2
Author(s): Jennifer Ciarochi, Jingyu Liu, Vince D. Calhoun, Hans J. Johnson, Maria Misiura, H. Jeremy Bockholt, Flor A. Espinoza, Arvind Caprihan, Sergey M. Plis, Jessica A. Turner, Jane S. Paulsen, Predict-Hd Investigators
Software Mentions: 2
Published: over 6 years ago
10.1186/s40529-018-0248-4
Genome-wide association study of rice genes and loci conferring resistance to Magnaporthe oryzae isolates from Taiwan
Cited by: 14
Author(s): Heng-An Lin, Szu‐Yu Chen, Fang‐Yu Chang, Chih‐Wei Tung, Yi‐Chia Chen, Wei-Chiang Shen, Ruey-Shyang Chen, Chih-Wen Wu, Chi-Ming Chung
Software Mentions: 2
Published: almost 6 years ago
10.3390/genes11091005
Genome-Wide Association Study and Pathway Analysis for Heterophil/Lymphocyte (H/L) Ratio in Chicken
Cited by: 6
Author(s): Jie Wang, Bo Zhu, Jie Wen, Qinghe Li, Guiping Zhao
Software Mentions: 2
Published: about 4 years ago
10.1186/s12917-015-0599-y
Genome-wide association study reveals a locus for nasal carriage of Staphylococcus aureus in Danish crossbred pigs
Cited by: 8
Author(s): Per Skallerup, Carmen Espinosa-Gongora, Claus B. Jørgensen, Luca Guardabassi, Merete Fredholm
Software Mentions: 2
Published: almost 9 years ago
10.3390/genes12020207
Phenotypic and Genomic Analysis of Cystic Hygroma in Pigs
Cited by: 2
Author(s): Anna Letko, A Schauer, Martijn F.L. Derks, Llorenç Grau‐Roma, Cord Drögemüller, Alexander Grahofer
Software Mentions: 2
Published: almost 4 years ago
10.3390/genes12030456
Identification of Genomic Regions Associated with Concentrations of Milk Fat, Protein, Urea and Efficiency of Crude Protein Utilization in Grazing Dairy Cows
Cited by: 11
Author(s): Hewa Bahithige Pavithra Chathurangi Ariyarathne, Martín Correa-Luna, Hugh T. Blair, Dorian J. Garrick, N. López‐Villalobos
Software Mentions: 2
Published: over 3 years ago
10.3390/genes12050643
A Nonsense Variant in Hephaestin Like 1 (HEPHL1) Is Responsible for Congenital Hypotrichosis in Belted Galloway Cattle
Cited by: 5
Author(s): Thibaud Kuca, Brandy M. Marron, Joana G. P. Jacinto, Julia M. Paris, Christian Gerspach, Jonathan E. Beever, Cord Drögemüller
Software Mentions: 2
Published: over 3 years ago
10.3390/genes12070997
Deleterious Mutations in the TPO Gene Associated with Familial Thyroid Follicular Cell Carcinoma in Dutch German Longhaired Pointers
Cited by: 5
Author(s): Yun Yu, H. Bovenhuis, Zhou Wu, Kimberley Laport, Martien A. M. Groenen, R.P.M.A. Crooijmans
Software Mentions: 2
Published: over 3 years ago
10.3390/genes12081243
Genome-Wide Analysis for Early Growth-Related Traits of the Locally Adapted Egyptian Barki Sheep
Cited by: 7
Author(s): Ibrahim Abousoliman, Henry Reyer, Michael Oster, Eduard Muráni, Ismail Mohamed, Klaus Wimmers
Software Mentions: 2
Published: over 3 years ago
10.1186/s12711-017-0314-5
Detection of QTL for traits related to adaptation to sub-optimal climatic conditions in chickens
Cited by: 10
Author(s): Ching-Yi Lien, Michèle Tixier‐Boichard, Shih-Wen Wu, Woei-Fuh Wang, Chen Siang Ng, Chih‐Feng Chen
Software Mentions: 2
Published: over 7 years ago
10.1186/s12711-019-0469-3
Frequentist p-values for large-scale-single step genome-wide association, with an application to birth weight in American Angus cattle
Cited by: 82
Author(s): Ignácio Aguilar, Andrés Legarra, F. F. Cardoso, Yutaka Masuda, Daniela Lourenço, I. Misztal
Software Mentions: 2
Published: over 5 years ago
10.1186/s12711-019-0492-4
A genome-wide association study explores the genetic determinism of host resistance to Salmonella pullorum infection in chickens
Cited by: 8
Author(s): Xinghua Li, Changsheng Nie, Yuchen Liu, Yu Chen, Xueze Lv, Liang Wang, Jianwei Zhang, Kaiyang Li, Yaxiong Jia, Liping Ban, Zhonghua Ning, Lujiang Qu
Software Mentions: 2
Published: about 5 years ago
10.1186/s13104-019-4700-7
Whole genome analysis of Black Bengal goat from Savar Goat Farm, Bangladesh
Cited by: 4
Author(s): S. M. Z. H. Chowdhury, K. H. M. Nazmul Hussain Nazir, Saam Hasan, Akma Kabir, Md. Muket Mahmud, Mahdi Robbani, Tahmina Tabassum, Tamanna Afroze, Aura Rahman, Md. Rafiqul Islam, Maqsud Hossain
Software Mentions: 2
Published: about 5 years ago
10.1186/s12919-018-0133-x
Heritability and genetic associations of triglyceride and HDL-C levels using pedigree-based and empirical kinships
Cited by: 6
Author(s): Nicholas B. Blackburn, Arthur Porto, Juan M. Peralta, John Blangero
Software Mentions: 2
Published: about 6 years ago
10.1186/s12919-016-0030-0
Assessing transmission ratio distortion in extended families: a comparison of analysis methods
Cited by: 1
Author(s): Sahir Bhatnagar, Celia M.T. Greenwood, Aurélie Labbe
Software Mentions: 2
Published: about 8 years ago
10.1186/s12711-020-00599-7
A publicly available repository of ROH islands reveals signatures of selection in different livestock and pet species
Cited by: 34
Author(s): Wim Gorssen, Roel Meyermans, Steven Janssens, Nadine Buys
Software Mentions: 2
Published: almost 4 years ago
10.1186/s12863-015-0241-9
Validation of markers with non-additive effects on milk yield and fertility in Holstein and Jersey cows
Cited by: 17
Author(s): Hassan Aliloo, J.E. Pryce, Óscar González-Recio, Benjamin G. Cocks, Ben J. Hayes
Software Mentions: 2
Published: over 9 years ago
10.1186/s12711-021-00663-w
A genome-wide association analysis for body weight at 35 days measured on 137,343 broiler chickens
Cited by: 8
Author(s): Christos Dadousis, Adriana Luiza Somavilla, Joanna J. Ilska, Martin Johnsson, Lorena Batista, Richard Mellanby, Denis J. Headon, Paolo Gottardo, Andrew Whalen, David C. Wilson, Ian Dunn, Gregor Gorjanc, Andreas Kranis, John M. Hickey
Software Mentions: 2
Published: about 3 years ago
10.1186/s12870-018-1435-x
Genetic architecture of common bunt resistance in winter wheat using genome-wide association study
Cited by: 35
Author(s): Amira M. I. Mourad, Ahmed Sallam, Vikas Belamkar, E.E. Mahdy, B. R. Bakheit, Atif Abo El-Wafaa, P. Stephen Baenziger
Software Mentions: 2
Published: about 6 years ago
10.1186/s12870-020-02813-6
Genomic regions associated with stripe rust resistance against the Egyptian race revealed by genome-wide association study
Cited by: 18
Author(s): Mohamed A. Abou-Zeid, Amira M. I. Mourad
Software Mentions: 2
Published: almost 4 years ago