Projects: pypi: pyfastx
https://packages.ecosyste.ms/registries/pypi.org/packages/pyfastx
pyfastx is a python module for fast random access to sequences from plain and gzipped FASTA/Q file
65 versions
Latest release: almost 3 years ago
12 dependent packages
10,229 downloads last month
Enhanced Analysis
Repository Activity:
Repository Owner:
Lianming Du (user)
Bioinformatician
Bioinformatician
README Analysis:
DOI Found
Science Score: 90/100
Starting Score: 100 points
Bonuses:
-
+6
Science terms in README
3 scientific terms found in README -
+10
DOI references
1 DOI references found in README
Penalties:
-
-10
PyPI ecosystem
General-purpose ecosystem -
-10
No science terms in description
No scientific terms found in description
Very Likely Science (90)
Papers Mentioning pyfastx 2
10.1093/bioinformatics/btab090
orfipy: a fast and flexible tool for extracting ORFsCited by: 26
Author(s): Urminder Singh, Eve Syrkin Wurtele
Software Mentions: 4
Published: over 5 years ago
10.21105/joss.02076
fqfa: A pure Python package for genomic sequence filesCited by: 0
Author(s): Alan F. Rubin
Software Mentions: 3
Published: over 6 years ago