Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: pypi: pydna

https://packages.ecosyste.ms/registries/pypi.org/packages/pydna

Representing double stranded DNA and functions for simulating cloning and homologous recombination between DNA molecules.
105 versions
Latest release: about 1 year ago
4 dependent packages
2,493 downloads last month

Papers Mentioning pydna 3

10.1186/s12859-015-0544-x
Pydna: a simulation and documentation tool for DNA assembly strategies using python
Cited by: 16
Author(s): Filipa Pereira, Flávio Azevedo, Ângela Carvalho, Gabriela Ribeiro, Mark W. Budde, Börje Johansson
Software Mentions: 4
Published: over 9 years ago
10.1186/s12859-021-04185-6
2-kupl: mapping-free variant detection from DNA-seq data of matched samples
Cited by: 1
Author(s): Yunfeng Wang, Haoliang Xue, Christine Pourcel, Yang Du, Daniel Gautheret
Software Mentions: 3
Published: over 3 years ago
10.1038/s41598-021-83937-z
A novel d-xylose isomerase from the gut of the wood feeding beetle Odontotaenius disjunctus efficiently expressed in Saccharomyces cerevisiae
Cited by: 9
Author(s): Paulo César Silva, Javier A. Ceja-Navarro, Flávio Azevedo, Ulaş Karaöz, Eoin L. Brodie, Börje Johansson
Software Mentions: 1
Published: over 3 years ago