Projects: pypi: pyScaf
https://packages.ecosyste.ms/registries/pypi.org/packages/pyScaf
Genome assembly scaffolding using information from paired-end/mate-pair libraries, long reads, and synteny to closely related species.
5 versions
Latest release: over 8 years ago
16 downloads last month
Enhanced Analysis
Repository Activity:
Repository Owner:
Leszek Pryszcz (user)
Father. Computational biologist. Working on RNA modifications. Passionate about nature, music and IT.
Father. Computational biologist. Working on RNA modifications. Passionate about nature, music and IT.
README Analysis:
Science Score: 65/100
Starting Score: 100 points
Bonuses:
-
+4
Science terms in README
2 scientific terms found in README
Penalties:
-
-10
PyPI ecosystem
General-purpose ecosystem -
-15
No science keywords
No scientific terms found in keywords/classifiers -
-10
No science terms in description
No scientific terms found in description -
-50
Non-science indicators
2 non-scientific terms found
Very Likely Science (65)
Papers Mentioning pyScaf 3
10.1590/0074-02760180438
Complete and de novo assembly of the Leishmania braziliensis (M2904) genomeCited by: 12
Author(s): Sandra González-de la Fuente, Esther Camacho, Ramón Peiró‐Pastor, Alberto Rastrojo, Fernando Carrasco-Ramiro, Begoña Aguado, José Marı́a Requena
Software Mentions: 2
Published: over 6 years ago
10.1128/MRA.00308-19
First Draft Genome Sequence of Wheat Spot Blotch Pathogen <i>Bipolaris sorokiniana</i> BS_112 from India, Obtained Using Hybrid AssemblyCited by: 10
Author(s): Rashmi Aggarwal, Sapna Sharma, Kartar Singh, Malkhan Singh Gurjar, M. S. Saharan, Suman Gupta, Bishnu Maya Bashyal, Kishor Gaikwad
Software Mentions: 2
Published: almost 6 years ago
10.1038/s41598-021-90683-9
Draft genome sequence of the pulse crop blackgram [Vigna mungo (L.) Hepper] reveals potential R-genesCited by: 15
Author(s): J. Souframanien, Avi Raizada, P. Dhanasekar, Penna Suprasanna
Software Mentions: 2
Published: about 4 years ago