Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: pypi: py2cytoscape

https://packages.ecosyste.ms/registries/pypi.org/packages/py2cytoscape

Utilities to use Cytoscape and Cytoscape.js from Python
19 versions
Latest release: over 5 years ago
2 dependent packages
350 downloads last month

Papers Mentioning py2cytoscape 6

10.12688/f1000research.6767.1

CyREST: Turbocharging Cytoscape Access for External Tools via a RESTful API
Cited by: 77
Author(s): Keiichiro Ono, Tanja Muetze, Georgi Kolishovski, Paul Shannon, Barry Demchak
Software Mentions: 8
Published: over 9 years ago

10.1186/s13059-019-1758-4

Cytoscape Automation: empowering workflow-based network analysis
Cited by: 753
Author(s): David Otasek, John H. Morris, Jorge Bouças, Alexander Pico, Barry Demchak
Software Mentions: 4
Published: about 5 years ago

10.12688/f1000research.14612.2

eXamine: Visualizing annotated networks in Cytoscape
Cited by: 3
Author(s): Philipp Spohr, Kasper Dinkla, Gunnar W. Klau, Mohammed El-Kebir
Software Mentions: 3
Published: over 6 years ago

10.12688/f1000research.14807.2

Identifier Mapping in Cytoscape
Cited by: 7
Author(s): Adam Treister, Alexander R. Pico
Software Mentions: 2
Published: over 6 years ago

10.12688/f1000research.14616.1

Automating the PathLinker app for Cytoscape
Cited by: 9
Author(s): Li Jun Huang, Jeffrey Law, T. M. Murali
Software Mentions: 2
Published: over 6 years ago

10.12688/f1000research.22280.2

Visualize omics data on networks with Omics Visualizer, a Cytoscape App
Cited by: 30
Author(s): Marc Legeay, Nadezhda T. Doncheva, John H. Morris, Lars Juhl Jensen
Software Mentions: 2
Published: over 4 years ago