Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: pypi: process
https://packages.ecosyste.ms/registries/pypi.org/packages/process
Running processes in python.
1 version
Latest release: about 1 year ago
Papers Mentioning process 30
10.1111/eva.12965
Relative genomic impacts of translocation history, hatchery practices, and farm selection in Pacific oyster <i>Crassostrea gigas</i> throughout the Northern HemisphereCited by: 11
Author(s): Ben J. G. Sutherland, Claire Rycroft, Anne‐Laure Ferchaud, Rob Saunders, Li Li, Sheng Liu, Amy M. Chan, Sarah P. Otto, Curtis A. Suttle, Kristina M. Miller
Software Mentions: 13
Published: over 4 years ago
10.1111/eva.13035
Demographic history and genomics of local adaptation in blue tit populationsCited by: 8
Author(s): Charles Perrier, Quentin Rougemont, Anne Charmantier
Software Mentions: 7
Published: over 4 years ago
10.1002/ece3.6378
Long‐lived marine species may be resilient to environmental variability through a temporal portfolio effectCited by: 1
Author(s): Jacek Maselko, Kimberly R. Andrews, Paul A. Hohenlohe
Software Mentions: 6
Published: over 4 years ago
10.1371/journal.pone.0243205
Neuropeptide S receptor gene Asn107 polymorphism in obese male individuals in PakistanCited by: 3
Author(s): Aftab Ahmad, Fahad Almsned, Pasha Ghazal, Malik Waqar Ahmed, M. Saleet Jafri, Habib Bokhari
Software Mentions: 5
Published: almost 4 years ago
10.7554/eLife.53008
Functional heterogeneity of lymphocytic patterns in primary melanoma dissected through single-cell multiplexingCited by: 39
Author(s): Francesca Maria Bosisio, Asier Antoranz, Yannick Van Herck, Maddalena M. Bolognesi, Lukas Marcelis, Clizia Chinello, Jasper Wouters, Fulvio Magni, Leonidas G. Alexopoulos, Marguerite Stas, Veerle Boecxstaens, Oliver Bechter, Giorgio Cattoretti, Joost van den Oord
Software Mentions: 5
Published: over 4 years ago
10.1186/1471-2105-13-82
Readjoiner: a fast and memory efficient string graph-based sequence assemblerCited by: 50
Author(s): Giorgio Gonnella, Stefan Kurtz
Software Mentions: 4
Published: over 12 years ago
10.3389/fpls.2021.730258
One Step Away From Extinction: A Population Genomic Analysis of A Narrow Endemic, Tropical Plant SpeciesCited by: 4
Author(s): Thais M. Teixeira, Alison G. Nazareno
Software Mentions: 4
Published: about 3 years ago
10.1371/journal.pgen.1009684
An autoimmune disease risk variant: A trans master regulatory effect mediated by IRF1 under immune stimulation?Cited by: 10
Author(s): Margot Brandt, Sarah Kim-Hellmuth, Marcello Ziosi, Alper Gokden, Aaron Wolman, Nora Lam, Yocelyn Recinos, Zharko Daniloski, John A. Morris, Veit Hornung, Johannes Schumacher, Tuuli Lappalainen
Software Mentions: 3
Published: over 3 years ago
10.1038/s42003-020-01431-0
Fairy circles in Namibia are assembled from genetically distinct grassesCited by: 2
Author(s): Christian Kappel, Nicola Illing, Cuong Nguyen Huu, Nichole N. Barger, Michael D. Cramer, Michael Lenhard, Jeremy J. Midgley
Software Mentions: 3
Published: almost 4 years ago
10.1111/eva.12534
Applying landscape genomic tools to forest management and restoration of Hawaiian koa (<i>Acacia koa</i>) in a changing environmentCited by: 40
Author(s): Paul F. Gugger, Christina T. Liang, Victoria L. Sork, Paul D. Hodgskiss, Jessica W. Wright
Software Mentions: 3
Published: about 7 years ago
10.1111/1755-0998.13043
A genomic approach to inferring kinship reveals limited intergenerational dispersal in the yellow fever mosquitoCited by: 47
Author(s): Moshe Jasper, Thomas L. Schmidt, Nazni Wasi Ahmad, Steven P. Sinkins, Ary A. Hoffmann
Software Mentions: 3
Published: over 5 years ago
10.1002/ece3.3274
<scp>RAD</scp> seq dataset with 90% missing data fully resolves recent radiation of <i>Petalidium</i> (Acanthaceae) in the ultra‐arid deserts of NamibiaCited by: 84
Author(s): Erin A. Tripp, Yi‐Hsin Erica Tsai, Yongbin Zhuang, Kyle G. Dexter
Software Mentions: 2
Published: about 7 years ago
10.1186/1756-0500-4-482
Expedited batch processing and analysis of transposon insertionsCited by: 3
Author(s): J. D. Smith, David A. Ray
Software Mentions: 2
Published: about 13 years ago
10.1107/S2052252520013007
Beyond integration: modeling every pixel to obtain better structure factors from stillsCited by: 8
Author(s): Derek Mendez, Robert Bolotovsky, Asmit Bhowmick, Aaron S. Brewster, Jan Kern, Junko Yano, James M. Holton, Nicholas K. Sauter
Software Mentions: 2
Published: about 4 years ago
10.1111/eva.12128
Genotyping by sequencing resolves shallow population structure to inform conservation of Chinook salmon ( <i>Oncorhynchus tshawytscha</i> )Cited by: 180
Author(s): Wesley A. Larson, Lisa W. Seeb, Meredith V. Everett, Ryan K. Waples, William D. Templin, James E. Seeb
Software Mentions: 2
Published: almost 11 years ago
10.1111/eva.13271
The different fates of two Asian horseshoe crab species with different dispersal abilitiesCited by: 2
Author(s): Qian Tang, Prashant Shingate, Yusli Wardiatno, Akbar John, Boon Hui Tay, Y. C. Tay, L. F. Yap, Jasmin Lim, Henry H.Y. Tong, Karenne Tun, Byrappa Venkatesh, Frank E. Rheindt
Software Mentions: 2
Published: over 3 years ago
10.1111/eva.12732
Genomic signatures of introgression between commercial and native bumblebees, <i>Bombus terrestris</i>, in western Iberian Peninsula—Implications for conservation and trade regulationCited by: 25
Author(s): Sofia G. Seabra, Sara E. Silva, Vera L. Nunes, Vítor C. Sousa, Joana T. Martins, Eduardo Marabuto, Ana S. B. Rodrigues, Francisco Pina‐Martins, Telma G. Laurentino, María Teresa Rebelo, Elisabete Figueiredo, Octávio S. Paulo
Software Mentions: 2
Published: almost 6 years ago
10.1186/s12863-017-0557-8
Genetic variation in populations of the earthworm, Lumbricus rubellus, across contaminated mine sitesCited by: 28
Author(s): C. A. Anderson, Luís Cunha, Pierfrancesco Sechi, Peter Kille, David J. Spurgeon
Software Mentions: 2
Published: almost 7 years ago
10.3390/genes11101218
Landscape Genomics of a Widely Distributed Snake, Dolichophis caspius (Gmelin, 1789) across Eastern Europe and Western AsiaCited by: 5
Author(s): Sarita Mahtani-Williams, William C. Fulton, Amélie Desvars-Larrive, Sara Lado, Jean P. Elbers, Bálint Halpern, Dávid Herczeg, Gergely Babocsay, Boris Lauš, Zoltán T. Nagy, Daniel Jablonski, Oleg V. Kukushkin, Pablo Orozco‐terWengel, Judit Vörös, Pamela A. Burger
Software Mentions: 2
Published: about 4 years ago
10.3390/genes12010089
The Impacts of Dam Construction and Removal on the Genetics of Recovering Steelhead (Oncorhynchus mykiss) Populations across the Elwha River WatershedCited by: 21
Author(s): Alexandra K. Fraik, John McMillan, Martin Liermann, Todd Bennett, Michael L. McHenry, Garrett J. McKinney, Abigail Wells, Gary A. Winans, Joanna L. Kelley, George R. Pess, Krista M. Nichols
Software Mentions: 2
Published: almost 4 years ago
10.1186/s12992-020-00560-9
Benchmarking the transparency, comprehensiveness and specificity of population nutrition commitments of major food companies in MalaysiaCited by: 12
Author(s): See Hoe Ng, Gary Sacks, Bridget Kelly, Heather Yeatman, Ella Robinson, Boyd Swinburn, Stefanie Vandevijvere, Karuthan Chinna, Mohd Tahir Ismail, Tilakavati Karupaiah
Software Mentions: 2
Published: over 4 years ago
10.1093/iob/obab020
Differences in Mate Pairings of Hatchery- and Natural-Origin Coho Salmon Inferred from Offspring GenotypesCited by: 2
Author(s): Heather L. Auld, David P. Jacobson, Adelaide Rhodes, Michael Banks
Software Mentions: 2
Published: almost 4 years ago
10.1016/S2214-109X(17)30058-X
Socioeconomic status and non-communicable disease behavioural risk factors in low-income and lower-middle-income countries: a systematic reviewCited by: 430
Author(s): Luke Allen, Julianne Williams, Nick Townsend, Bente Mikkelsen, Nia Roberts, Charlie Foster, Kremlin Wickramasinghe
Software Mentions: 2
Published: over 7 years ago
10.1128/genomeA.00579-18
Complete Genome Sequences of Three Bacillus amyloliquefaciens Strains That Inhibit the Growth of Listeria monocytogenes <i>In Vitro</i>Cited by: 4
Author(s): Thao Dang-Hien Tran, Steven Huynh, Craig T. Parker, Robert Hnasko, Lisa Gorski, Jeffery A. McGarvey
Software Mentions: 1
Published: over 6 years ago
10.1186/s12904-021-00816-0
Cost-utility analysis of palliative care in patients with advanced cancer: a retrospective studyCited by: 2
Author(s): Hao Wu, Ping Lin, Shujuan Yang, Wei Zhang, Wenjuan Tao
Software Mentions: 1
Published: about 3 years ago
10.3390/ma12142288
Fractal Analysis of the Fracture Evolution of Freeze-Thaw Damage to Asphalt ConcreteCited by: 15
Author(s): Jun Li, Fengchi Wang, Yi Fu, Jie Ma, Zhenhuan Lin
Software Mentions: 1
Published: over 5 years ago
10.1186/s12931-014-0139-5
Genome-wide mRNA expression profiling in vastus lateralis of COPD patients with low and normal fat free mass index and healthy controlsCited by: 31
Author(s): Roberto Rabinovich, Ellen Drost, Jonathan Manning, Donald R. Dunbar, M. Carmen Díaz-Ramos, Ramzi Lakhdar, Ricardo Bastos, William MacNee
Software Mentions: 1
Published: almost 10 years ago
10.1073/pnas.2100170118
2′-O methylation of RNA cap in SARS-CoV-2 captured by serial crystallographyCited by: 41
Author(s): Mateusz Wilamowski, D.A. Sherrell, G. Minasov, Young Chang Kim, L. Shuvalova, Alex Lavens, Ryan Chard, N. Maltseva, R. Jedrzejczak, Mónica Rosas‐Lemus, Nickolaus Saint, Ian Foster, K. Michalska, K.J.F. Satchell, A. Joachimiak
Software Mentions: 1
Published: over 3 years ago
10.1128/genomeA.00027-15
Complete Sequences of Six IncA/C Plasmids of Multidrug-Resistant Salmonella enterica subsp. enterica Serotype NewportCited by: 16
Author(s): Guojie Cao, Marc W. Allard, Maria Hoffmann, Steven R. Monday, Tim Muruvanda, Yan Luo, Justin Payne, Lydia V. Rump, Kevin Meng, Shaohua Zhao, Patrick F. McDermott, Eric W. Brown, Jianghong Meng
Software Mentions: 1
Published: over 9 years ago
10.1128/genomeA.00690-15
Complete Genome Sequence of Salmonella enterica subsp. <i>enterica</i> Serovar Agona 460004 2-1, Associated with a Multistate Outbreak in the United StatesCited by: 12
Author(s): Maria Hoffmann, Justin L. Payne, Richard J. Roberts, Marc W. Allard, Eric W. Brown, James B. Pettengill
Software Mentions: 1
Published: about 9 years ago