An open API service providing mapping between scientific papers and software projects that are mentioned in them.

Projects: pypi: pomegranate

https://packages.ecosyste.ms/registries/pypi.org/packages/pomegranate

A PyTorch implementation of probabilistic models.
64 versions
Latest release: almost 2 years ago
15 dependent packages
22,706 downloads last month

Enhanced Analysis
Repository Activity:
Repository Owner: Jacob Schreiber (user)
I am a post-doc at Stanford University (previously University of Washington), studying large scale machine learning and computational biology Academic
README Analysis:
Science Score: 85/100
Starting Score: 100 points
Bonuses:
  • +20 Academic repository owner
    Repository owned by academic institution
  • +16 Science terms in README
    8 scientific terms found in README
Penalties:
  • -10 PyPI ecosystem
    General-purpose ecosystem
  • -15 No science keywords
    No scientific terms found in keywords/classifiers
  • -10 No science terms in description
    No scientific terms found in description

Very Likely Science (85)

Papers Mentioning pomegranate 5

10.1186/s12874-020-00977-1
Generation and evaluation of synthetic patient data
Cited by: 120
Author(s): Alim P. C. Gonçalves, Priyadip Ray, Braden Soper, Jennifer Stevens, Linda Coyle, Ana Paula Sales
Software Mentions: 6
Published: about 5 years ago
10.1038/s41598-018-35399-z
Employing fingerprinting of medicinal plants by means of LC-MS and machine learning for species identification task
Cited by: 16
Author(s): Pavel Kharyuk, Dmitry Nazarenko, Ivan Oseledets, И. А. Родин, О. А. Шпигун, Andrey Tsitsilin, Mikhail Lavrentyev
Software Mentions: 3
Published: over 6 years ago
10.1186/s13059-020-02002-6
Hi-D: nanoscale mapping of nuclear dynamics in single living cells
Cited by: 55
Author(s): Haitham A. Shaban, Roman Barth, Ludmila Recoules, Kerstin Bystricky
Software Mentions: 1
Published: over 5 years ago
10.7554/eLife.60404
DeepFRET, a software for rapid and automated single-molecule FRET data classification using deep learning
Cited by: 37
Author(s): Johannes Thomsen, Magnus Berg Sletfjerding, Simon Bo Jensen, Stefano Stella, Bijoya Paul, Mette Galsgaard Malle, Guillermo Montoya, T. C. Petersen, Nikos S. Hatzakis
Software Mentions: 1
Published: over 4 years ago
10.1186/s12984-021-00883-7
Hidden Markov Model based stride segmentation on unsupervised free-living gait data in Parkinson’s disease patients
Cited by: 17
Author(s): Nils Roth, Arne Küderle, Martin Ullrich, Till Gladow, Franz Marxreiter, Jochen Klucken, Bjoern M. Eskofier, Felix Kluge
Software Mentions: 1
Published: about 4 years ago