Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: pypi: pdftotext

https://packages.ecosyste.ms/registries/pypi.org/packages/pdftotext

Simple PDF text extraction
15 versions
Latest release: almost 3 years ago
13 dependent packages
70,044 downloads last month

Papers Mentioning pdftotext 14

10.1093/database/baab039

Automatization and self-maintenance of the O-GlcNAcome catalog: a smart scientific database
Cited by: 9
Author(s): Florian Malard, Eugenia Wulff‐Fuentes, Rex Berendt, Guillaume Didier, Stéphanie Olivier-Van Stichelen
Software Mentions: 6
Published: over 3 years ago

10.3389/fgene.2019.00549

Comprehensive Review of Models and Methods for Inferences in Bio-Chemical Reaction Networks
Cited by: 32
Author(s): Pavel Loskot, Komlan Atitey, Lyudmila Mihaylova
Software Mentions: 4
Published: over 5 years ago

10.3390/e21060612

Visual Analysis of Research Paper Collections Using Normalized Relative Compression
Cited by: 1
Author(s): Pere‐Pau Vázquez
Software Mentions: 4
Published: about 5 years ago

10.1186/gb-2008-9-2-r31

Text-mining assisted regulatory annotation
Cited by: 38
Author(s): Stein Aerts, Maximilian Haeussler, Steven Van Vooren, Obi L. Griffith, Paco Hulpiau, Steven J.M. Jones, Stephen B. Montgomery, Casey M. Bergman
Software Mentions: 3
Published: over 16 years ago

10.12688/f1000research.7329.3

MSL: Facilitating automatic and physical analysis of published scientific literature in PDF format
Cited by: 1
Author(s): Zeeshan Ahmed, Thomas Dandekar
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pcbi.1005962

A comprehensive and quantitative comparison of text-mining in 15 million full-text articles versus their corresponding abstracts
Cited by: 113
Author(s): David Westergaard, Hans Henrik Stærfeldt, Christian Tønsberg, Lars Juhl Jensen, Søren Brunak
Software Mentions: 2
Published: over 6 years ago

10.1186/gb-2008-9-s2-s10

Automating curation using a natural language processing pipeline
Cited by: 17
Author(s): Beatrice Alex, Claire Grover, Barry Haddow, Mijail Kabadjov, Ewan Klein, Michael Matthews, Richard Tobin, Xinglong Wang
Software Mentions: 2
Published: over 16 years ago

10.1093/database/baz152

Building a pipeline to solicit expert knowledge from the community to aid gene summary curation
Cited by: 5
Author(s): Giulia Antonazzo, Jose-Maria Urbano, Steven J Marygold, Gillian Millburn, Nicholas H. Brown
Software Mentions: 1
Published: over 4 years ago

10.1186/1471-2105-10-S8-S1

Extraction of human kinase mutations from literature, databases and genotyping studies
Cited by: 29
Author(s): Martin Krallinger, Jose M. G. Izarzugaza, Carlos Rodríguez-Penagos, Alfonso Valencia
Software Mentions: 1
Published: about 15 years ago

10.1186/1471-2105-13-16

Automatic categorization of diverse experimental information in the bioscience literature
Cited by: 28
Author(s): Ruihua Fang, Gary Schindelman, Kimberly Van Auken, Jolene S. Fernandes, Wen Chen, Xiaodong Wang, Paul A. Davis, Mary Ann Tuli, Steven J Marygold, Gillian Millburn, Beverley Matthews, Haiyan Zhang, Nicholas H. Brown, William M. Gelbart, Paul W. Sternberg
Software Mentions: 1
Published: over 12 years ago

10.1186/1471-2105-12-S8-S3

The Protein-Protein Interaction tasks of BioCreative III: classification/ranking of articles and linking bio-ontology concepts to full text
Cited by: 116
Author(s): Martin Krallinger, Miguél Vázquez, Florian Leitner, David Salgado, Andrew Chatr‐aryamontri, Andrew G. Winter, Livia Perfetto, Leonardo Briganti, Luana Licata, Marta Iannuccelli, Luisa Castagnoli, Gianni Cesareni, Mike Tyers, Gerold Schneider, Fabio Rinaldi, Robert Leaman, Graciela González, Sérgio Matos, Sun Kim, W. John Wilbur, Luís M. Rocha, Hagit Shatkay, Ashish V. Tendulkar, Shashank Agarwal, Feifan Liu, Xinglong Wang, Rafał Rak, Keith Noto, Charles Elkan, Zhiyong Lu, Rezarta Islamaj Doğan, Jean-Fred Fontaine, Miguel A. Andrade‐Navarro, Alfonso Valencia
Software Mentions: 1
Published: almost 13 years ago

10.1371/journal.pcbi.0030016

Automatic Extraction of Protein Point Mutations Using a Graph Bigram Association
Cited by: 43
Author(s): Lawrence C Lee, Florence Horn, Fred E. Cohen
Software Mentions: 1
Published: over 17 years ago

10.1371/journal.pone.0213266

Semi-automated fact-checking of nucleotide sequence reagents in biomedical research publications: The Seek & Blastn tool
Cited by: 43
Author(s): Cyril Labbé, Natalie Grima, Thierry Gautier, Bertrand Favier, Jennifer A. Byrne
Software Mentions: 1
Published: over 5 years ago

10.1186/1471-2105-9-406

BibGlimpse: The case for a light-weight reprint manager in distributed literature research
Cited by: 3
Author(s): Thomas Tüchler, Golda Velez, Alexandra B. Graf, David P. Kreil
Software Mentions: 1
Published: almost 16 years ago