Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: pypi: pdftotext
https://packages.ecosyste.ms/registries/pypi.org/packages/pdftotext
Simple PDF text extraction
15 versions
Latest release: about 3 years ago
13 dependent packages
70,044 downloads last month
Papers Mentioning pdftotext 14
10.1093/database/baab039
Automatization and self-maintenance of the O-GlcNAcome catalog: a smart scientific databaseCited by: 9
Author(s): Florian Malard, Eugenia Wulff‐Fuentes, Rex Berendt, Guillaume Didier, Stéphanie Olivier-Van Stichelen
Software Mentions: 6
Published: almost 4 years ago
10.3389/fgene.2019.00549
Comprehensive Review of Models and Methods for Inferences in Bio-Chemical Reaction NetworksCited by: 32
Author(s): Pavel Loskot, Komlan Atitey, Lyudmila Mihaylova
Software Mentions: 4
Published: over 5 years ago
10.3390/e21060612
Visual Analysis of Research Paper Collections Using Normalized Relative CompressionCited by: 1
Author(s): Pere‐Pau Vázquez
Software Mentions: 4
Published: over 5 years ago
10.1186/gb-2008-9-2-r31
Text-mining assisted regulatory annotationCited by: 38
Author(s): Stein Aerts, Maximilian Haeussler, Steven Van Vooren, Obi L. Griffith, Paco Hulpiau, Steven J.M. Jones, Stephen B. Montgomery, Casey M. Bergman
Software Mentions: 3
Published: almost 17 years ago
10.12688/f1000research.7329.3
MSL: Facilitating automatic and physical analysis of published scientific literature in PDF formatCited by: 1
Author(s): Zeeshan Ahmed, Thomas Dandekar
Software Mentions: 2
Published: over 6 years ago
10.1371/journal.pcbi.1005962
A comprehensive and quantitative comparison of text-mining in 15 million full-text articles versus their corresponding abstractsCited by: 113
Author(s): David Westergaard, Hans Henrik Stærfeldt, Christian Tønsberg, Lars Juhl Jensen, Søren Brunak
Software Mentions: 2
Published: almost 7 years ago
10.1186/gb-2008-9-s2-s10
Automating curation using a natural language processing pipelineCited by: 17
Author(s): Beatrice Alex, Claire Grover, Barry Haddow, Mijail Kabadjov, Ewan Klein, Michael Matthews, Richard Tobin, Xinglong Wang
Software Mentions: 2
Published: almost 17 years ago
10.1093/database/baz152
Building a pipeline to solicit expert knowledge from the community to aid gene summary curationCited by: 5
Author(s): Giulia Antonazzo, Jose-Maria Urbano, Steven J Marygold, Gillian Millburn, Nicholas H. Brown
Software Mentions: 1
Published: almost 5 years ago
10.1186/1471-2105-10-S8-S1
Extraction of human kinase mutations from literature, databases and genotyping studiesCited by: 29
Author(s): Martin Krallinger, Jose M. G. Izarzugaza, Carlos Rodríguez-Penagos, Alfonso Valencia
Software Mentions: 1
Published: over 15 years ago
10.1186/1471-2105-13-16
Automatic categorization of diverse experimental information in the bioscience literatureCited by: 28
Author(s): Ruihua Fang, Gary Schindelman, Kimberly Van Auken, Jolene S. Fernandes, Wen Chen, Xiaodong Wang, Paul A. Davis, Mary Ann Tuli, Steven J Marygold, Gillian Millburn, Beverley Matthews, Haiyan Zhang, Nicholas H. Brown, William M. Gelbart, Paul W. Sternberg
Software Mentions: 1
Published: almost 13 years ago
10.1186/1471-2105-12-S8-S3
The Protein-Protein Interaction tasks of BioCreative III: classification/ranking of articles and linking bio-ontology concepts to full textCited by: 116
Author(s): Martin Krallinger, Miguél Vázquez, Florian Leitner, David Salgado, Andrew Chatr‐aryamontri, Andrew G. Winter, Livia Perfetto, Leonardo Briganti, Luana Licata, Marta Iannuccelli, Luisa Castagnoli, Gianni Cesareni, Mike Tyers, Gerold Schneider, Fabio Rinaldi, Robert Leaman, Graciela González, Sérgio Matos, Sun Kim, W. John Wilbur, Luís M. Rocha, Hagit Shatkay, Ashish V. Tendulkar, Shashank Agarwal, Feifan Liu, Xinglong Wang, Rafał Rak, Keith Noto, Charles Elkan, Zhiyong Lu, Rezarta Islamaj Doğan, Jean-Fred Fontaine, Miguel A. Andrade‐Navarro, Alfonso Valencia
Software Mentions: 1
Published: about 13 years ago
10.1371/journal.pcbi.0030016
Automatic Extraction of Protein Point Mutations Using a Graph Bigram AssociationCited by: 43
Author(s): Lawrence C Lee, Florence Horn, Fred E. Cohen
Software Mentions: 1
Published: almost 18 years ago
10.1371/journal.pone.0213266
Semi-automated fact-checking of nucleotide sequence reagents in biomedical research publications: The Seek & Blastn toolCited by: 43
Author(s): Cyril Labbé, Natalie Grima, Thierry Gautier, Bertrand Favier, Jennifer A. Byrne
Software Mentions: 1
Published: almost 6 years ago
10.1186/1471-2105-9-406
BibGlimpse: The case for a light-weight reprint manager in distributed literature researchCited by: 3
Author(s): Thomas Tüchler, Golda Velez, Alexandra B. Graf, David P. Kreil
Software Mentions: 1
Published: over 16 years ago