Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: pypi: pairsnp

https://packages.ecosyste.ms/registries/pypi.org/packages/pairsnp

A simple package for calculating pairwise SNP distances
5 versions
Latest release: over 5 years ago
30 downloads last month

Papers Mentioning pairsnp 3

10.1186/s12866-021-02228-9
Genomic analysis of group B Streptococcus from milk demonstrates the need for improved biosecurity: a cross-sectional study of pastoralist camels in Kenya
Cited by: 3
Author(s): Dinah Seligsohn, Chiara Crestani, Taya Forde, Erika Chenais, Ruth N. Zadoks
Software Mentions: 3
Published: over 3 years ago
10.1016/S2666-5247(21)00117-8
Defining nosocomial transmission of Escherichia coli and antimicrobial resistance genes: a genomic surveillance study
Cited by: 31
Author(s): Catherine Ludden, Francesc Español i Coll, Theodore Gouliouris, Olivier Restif, Beth Blane, Grace A. Blackwell, Narender Kumar, Plamena Naydenova, Charles Crawley, Nicholas M. Brown, Julian Parkhill, Sharon J. Peacock
Software Mentions: 2
Published: about 3 years ago
10.7554/eLife.66857
Patterns of within-host genetic diversity in SARS-CoV-2
Cited by: 96
Author(s): Gerry Tonkin‐Hill, Iñigo Martincorena, Roberto Amato, Andrew Lawson, Moritz Gerstung, Ian Johnston, David Jackson, Naomi Park, Stefanie Lensing, Michael A. Quail, Sónia Gonçalves, Cristina V. Ariani, Michael Spencer Chapman, William L. Hamilton, Luke W. Meredith, Grant Hall, Aminu S. Jahun, Yasmin Chaudhry, Myra Hosmillo, Malte L. Pinckert, Iliana Georgana, Anna Yakovleva, Laura Caller, Sarah Caddy, Theresa Feltwell, Fahad Khokhar, Charlotte J. Houldcroft, Martin D. Curran, Surendra Parmar, Alex Alderton, Andrew Nelson, Ewan M. Harrison, John Sillitoe, Stephen D. Bentley, Jeffrey C. Barrett, M. Estée Török, Ian Goodfellow, Cordelia Langford, Dominic Kwiatkowski
Software Mentions: 1
Published: over 3 years ago