Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: pypi: p4

https://packages.ecosyste.ms/registries/pypi.org/packages/p4

A Python Pre-Processor for the Processing system
5 versions
Latest release: over 7 years ago
6,076 downloads last month

Papers Mentioning p4 11

Bio.Phylo: A unified toolkit for processing, analyzing and visualizing phylogenetic trees in Biopython
Cited by: 116
Author(s): Eric Talevich, Brandon M. Invergo, Peter J. A. Cock, Brad Chapman
Software Mentions: 4
Published: over 12 years ago

10.7554/eLife.36278

Support for a clade of Placozoa and Cnidaria in genes with minimal compositional bias
Cited by: 77
Author(s): Christopher E. Laumer, Harald R. Gruber‐Vodicka, Michael G. Hadfield, Vicki B. Pearse, Ana Riesgo, John C. Marioni, Gonzalo Giribet
Software Mentions: 3
Published: about 6 years ago

10.1186/1471-2148-13-1

New approaches for unravelling reassortment pathways
Cited by: 86
Author(s): Victoria Svinti, James A. Cotton, James O. McInerney
Software Mentions: 3
Published: almost 12 years ago

10.1093/gigascience/giz059

A haplotype-resolved draft genome of the European sardine (Sardina pilchardus)
Cited by: 13
Author(s): Bruno Louro, Gianluca De Moro, Carlos M.E.V.R. Garcia, Cymon J. Cox, Ana Veríssimo, Stephen J. Sabatino, António M. Santos, Adelino V.M. Canário
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0021080

Informational Gene Phylogenies Do Not Support a Fourth Domain of Life for Nucleocytoplasmic Large DNA Viruses
Cited by: 72
Author(s): Tom A. Williams, T. Martin Embley, Eva Heinz
Software Mentions: 2
Published: over 13 years ago

10.1186/1471-2148-12-148

Multiple functionally divergent and conserved copies of alpha tubulin in bdelloid rotifers
Cited by: 12
Author(s): Isobel Eyres, Eftychios Frangedakis, Diego Fontaneto, Elisabeth A. Herniou, Chiara Boschetti, Adrian R. Carr, Gos Micklem, Alan Tunnacliffe, Timothy G. Barraclough
Software Mentions: 2
Published: over 12 years ago

10.1098/rspb.2018.2776

A congruent topology for deep gastropod relationships
Cited by: 60
Author(s): Tauana Junqueira Cunha
Software Mentions: 1
Published: over 5 years ago

10.1186/1471-2148-6-27

Evolution of four gene families with patchy phylogenetic distributions: influx of genes into protist genomes
Cited by: 92
Author(s): Jan O. Andersson, Robert P. Hirt, Peter G. Foster, Andrew J. Roger
Software Mentions: 1
Published: over 18 years ago

10.1098/rsos.140436

Implementing and testing Bayesian and maximum-likelihood supertree methods in phylogenetics
Cited by: 52
Author(s): Wasiu Akanni, Mark Wilkinson, Christopher J. Creevey, Peter G. Foster, Davide Pisani
Software Mentions: 1
Published: over 9 years ago

10.1371/journal.ppat.1002979

The Genome of the Obligate Intracellular Parasite Trachipleistophora hominis: New Insights into Microsporidian Genome Dynamics and Reductive Evolution
Cited by: 120
Author(s): Eva Heinz, Tom A. Williams, Sirintra Nakjang, Christophe Noël, Daniel Swan, Alina V. Goldberg, Simon R. Harris, Thomas Weinmaier, Stephanie Markert, Dörte Becher, Jörg Bernhardt, Tal Dagan, Christian Hacker, John M. Lucocq, Thomas Schweder, Thomas Rattei, Neil Hall, Robert P. Hirt, T. Martin Embley
Software Mentions: 1
Published: about 12 years ago

10.1371/journal.pone.0054063

Phylogenetic Analysis and DNA-based Species Confirmation in Anopheles (Nyssorhynchus)
Cited by: 71
Author(s): Peter G. Foster, Eduardo Sterlino Bergo, Brian P. Bourke, Tatiane Marques Porangaba de Oliveira, Sandra Sayuri Nagaki, Denise Cristina Sant'Ana, Maria Anice Mureb Sallum
Software Mentions: 1
Published: almost 12 years ago