Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: pypi: optlang

https://packages.ecosyste.ms/registries/pypi.org/packages/optlang

Formulate optimization problems using sympy expressions and solve them using interfaces to third-party optimization software (e.g. GLPK).
69 versions
Latest release: about 1 year ago
13 dependent packages
8,675 downloads last month

Papers Mentioning optlang 3

10.1371/journal.pcbi.1007847

Medusa: Software to build and analyze ensembles of genome-scale metabolic network reconstructions
Cited by: 18
Author(s): Gregory L. Medlock, Thomas J. Moutinho, Jason A. Papin
Software Mentions: 4
Published: over 4 years ago

10.1016/j.cels.2019.11.006

Guiding the Refinement of Biochemical Knowledgebases with Ensembles of Metabolic Networks and Machine Learning
Cited by: 44
Author(s): Gregory L. Medlock, Jason A. Papin
Software Mentions: 4
Published: almost 5 years ago

10.1016/j.mec.2019.e00087

OptCouple: Joint simulation of gene knockouts, insertions and medium modifications for prediction of growth-coupled strain designs
Cited by: 32
Author(s): Kristian Jensen, Valentijn Broeken, Anne Sofie Lærke Hansen, Nikolaus Sonnenschein, Markus J. Herrgård
Software Mentions: 1
Published: over 5 years ago