Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: pypi: numpy
https://packages.ecosyste.ms/registries/pypi.org/packages/numpy
Fundamental package for array computing in Python
142 versions
Latest release: about 1 year ago
24,932 dependent packages
196,497,842 downloads last month
Papers Mentioning numpy 832
10.1371/journal.pone.0243692
Evaluation of pool-based testing approaches to enable population-wide screening for COVID-19Cited by: 22
Author(s): Timo de Wolff, Dirk Pflüger, Michael F. Rehme, Janin Heuer, Martin Immanuel Bittner
Software Mentions: 1
Published: almost 4 years ago
10.3389/fimmu.2018.02539
Major TCR Repertoire Perturbation by Immunodominant HLA-B*44:03-Restricted CMV-Specific T CellsCited by: 18
Author(s): Meriem Attaf, Amna Malik, Mai Charlotte Krogh Severinsen, Julia Roider, Paul Ogongo, Søren Buus, Thumbi Ndung’u, Alasdair Leslie, Henrik N. Kløverpris, Philippa C. Matthews, Andrew K. Sewell, Philip Goulder
Software Mentions: 1
Published: about 6 years ago
10.1523/ENEURO.0223-19.2019
The Future Is Open: Open-Source Tools for Behavioral Neuroscience ResearchCited by: 38
Author(s): Samantha R. White, Linda M. Amarante, Alexxai V. Kravitz, Mark Laubach
Software Mentions: 1
Published: over 5 years ago
10.3389/fncom.2020.00078
Learning Long Temporal Sequences in Spiking Networks by Multiplexing Neural OscillationsCited by: 5
Author(s): Philippe Vincent-Lamarre, Matias Calderini, Jean-Philippe Thivierge
Software Mentions: 1
Published: about 4 years ago
10.1007/s00223-021-00832-5
Quantitative Backscattered Electron Imaging of Bone Using a Thermionic or a Field Emission Electron SourceCited by: 13
Author(s): Markus Hartmann, Stéphane Blouin, Barbara M. Misof, Nadja Fratzl–Zelman, Paul Roschger, Andrea Berzlanovich, G.M. Gruber, Peter C. Brugger, Jochen Zwerina, Peter Fratzl
Software Mentions: 1
Published: over 3 years ago
10.3389/fdata.2021.589417
MARGIN: Uncovering Deep Neural Networks Using Graph Signal AnalysisCited by: 0
Author(s): Rushil Anirudh, Jayaraman J. Thiagarajan, Rahul Sridhar, Peer-Timo Bremer
Software Mentions: 1
Published: over 3 years ago
10.1002/mrm.27531
On the sensitivity of quantitative susceptibility mapping for measuring trabecular bone densityCited by: 17
Author(s): Maximilian N. Diefenbach, Jakob Meineke, Stefan Ruschke, Thomas Baum, Alexandra S. Gersing, Dimitrios C. Karampinos
Software Mentions: 1
Published: about 6 years ago
10.7717/peerj.1851
Dramatyping: a generic algorithm for detecting reasonable temporal correlations between drug administration and lab value alterationsCited by: 1
Author(s): Axel Newe
Software Mentions: 1
Published: over 8 years ago
10.3390/ma14185132
A Study to Derive Equivalent Mechanical Properties of Porous Materials with Orthotropic ElasticityCited by: 1
Author(s): Changmin Pyo, Younghyun Kim, Jae-Woong Kim, Seok Joo Kang
Software Mentions: 1
Published: about 3 years ago
10.12688/f1000research.15146.2
aMatReader: Importing adjacency matrices via Cytoscape AutomationCited by: 3
Author(s): Brett Settle, David Otasek, John H. Morris, Barry Demchak
Software Mentions: 1
Published: over 6 years ago
10.1371/journal.pone.0255212
The transmission of SARS-CoV-2 is likely comodulated by temperature and by relative humidityCited by: 19
Author(s): Kevin S. Raines, Sebastian Doniach, Gyan Bhanot
Software Mentions: 1
Published: over 3 years ago
10.1016/j.yjsbx.2020.100023
Reconstruction of Average Subtracted Tubular Regions (RASTR) enables structure determination of tubular filaments by cryo-EMCited by: 1
Author(s): Peter S. Randolph, Scott M. Stagg
Software Mentions: 1
Published: almost 5 years ago
10.1177/0037549721996031
Evolving convolutional neural network parameters through the genetic algorithm for the breast cancer classification problemCited by: 16
Author(s): Khatereh Davoudi, Parimala Thulasiraman
Software Mentions: 1
Published: over 3 years ago
10.3390/s20195668
Generalized Deep Neural Network Model for Cuffless Blood Pressure Estimation with Photoplethysmogram Signal OnlyCited by: 44
Author(s): Yan Cheng Hsu, Yung‐Hui Li, Chung‐Liang Chang, Latifa Nabila Harfiya
Software Mentions: 1
Published: about 4 years ago
10.3390/s20185265
Malware Detection of Hangul Word Processor Files Using Spatial Pyramid Average PoolingCited by: 5
Author(s): Young-Seob Jeong, Jiyoung Woo, Sang‐Min Lee, Ah Reum Kang
Software Mentions: 1
Published: about 4 years ago
10.1002/advs.202000900
A Biomimetic Approach toward Enhancing Angiogenesis: Recombinantly Expressed Domain V of Human Perlecan Is a Bioactive Molecule That Promotes Angiogenesis and Vascularization of Implanted BiomaterialsCited by: 20
Author(s): Xiaoting Lin, Fengying Tang, Shouyuan Jiang, Heba Khamis, André Bongers, John M. Whitelock, Megan S. Lord, Jelena Rnjak‐Kovacina
Software Mentions: 1
Published: over 4 years ago
10.1186/1471-2105-15-33
QTrim: a novel tool for the quality trimming of sequence reads generated using the Roche/454 sequencing platformCited by: 25
Author(s): Ram Krishna Shrestha, Baruch Lubinsky, Vijay B Bansode, Mónica B J Moinz, Grace P. McCormack, Simon Travers
Software Mentions: 1
Published: almost 11 years ago
10.3390/s18114073
Enhancement of Localization Systems in NLOS Urban Scenario with Multipath Ray Tracing Fingerprints and Machine LearningCited by: 23
Author(s): Marcelo N. de Sousa, Reiner S. Thomä
Software Mentions: 1
Published: about 6 years ago
10.3390/e22091004
A-DVM: A Self-Adaptive Variable Matrix Decision Variable Selection Scheme for Multimodal ProblemsCited by: 1
Author(s): Marco Antônio Florenzano Mollinetti, Bernardo B. Gatto, Mário Tasso Ribeiro Serra Neto, Takahito Kuno
Software Mentions: 1
Published: about 4 years ago
10.1038/s41598-020-80939-1
Connecting complex networks to nonadditive entropiesCited by: 11
Author(s): Rute Oliveira, Samuraí Brito, L. R. da Silva, Constantino Tsallis
Software Mentions: 1
Published: almost 4 years ago
10.1038/s41598-020-68468-3
Standardization procedure for flow cytometry data harmonization in prospective multicenter studiesCited by: 18
Author(s): Lucas Le Lann, P Jouve, Marta E. Alarcón‐Riquelme, Christophe Jamin, Jacques‐Olivier Pers
Software Mentions: 1
Published: over 4 years ago
10.1371/journal.pone.0203434
Computation of the normalized cross-correlation by fast Fourier transformCited by: 38
Author(s): Artan Kaso
Software Mentions: 1
Published: about 6 years ago
10.1038/s41598-020-65889-y
Cell type specific adhesion to surfaces functionalised by amine plasma polymersCited by: 24
Author(s): Petra Černochová, Lucie Blahová, Jiřina Medalová, David Nečas, Miroslav Michlíček, Preeti Kaushik, Jan Přibyl, Jana Bartošíková, Anton Manakhov, Lucie Bačáková, Lenka Zajı́čková
Software Mentions: 1
Published: over 4 years ago
10.7554/eLife.49000
From plasmodesma geometry to effective symplasmic permeability through biophysical modellingCited by: 25
Author(s): Eva E. Deinum, Bela M. Mulder, Yoselin Benitez‐Alfonso
Software Mentions: 1
Published: almost 5 years ago
10.18632/oncotarget.13103
OutLyzer: software for extracting low-allele-frequency tumor mutations from sequencing background noise in clinical practiceCited by: 18
Author(s): Etienne Müller, Nicolas Goardon, Baptiste Brault, Antoine Rousselin, Germain Paimparay, Angélina Legros, Robin Fouillet, Olivia Bruet, Aurore Tranchant, Florian Domin, Chankannira San, Céline Quesnelle, Thierry Frébourg, Agathe Ricou, Sophie Krieger, Dominique Vaur, Laurent Castéra
Software Mentions: 1
Published: about 8 years ago
10.1186/s12859-021-04148-x
The Coronavirus Network Explorer: mining a large-scale knowledge graph for effects of SARS-CoV-2 on host cell functionCited by: 13
Author(s): A. Krämer, Jean-Noël Billaud, Stuart Tugendreich, Dan Shiffman, Martin Jones, Jeff Green
Software Mentions: 1
Published: over 3 years ago
10.1038/s41598-019-48219-9
Author Correction: Exploring the Sequence-based Prediction of Folding Initiation Sites in ProteinsCited by: 3
Author(s): Daniele Raimondi, Gabriele Orlando, Rita Pancsa, Taushif Khan, Wim Vranken
Software Mentions: 1
Published: over 5 years ago
10.1371/journal.pone.0228434
Features spaces and a learning system for structural-temporal data, and their application on a use case of real-time communication network validation dataCited by: 0
Author(s): Guido Schwenk, Ben Jochinke, Klaus Robert Müller
Software Mentions: 1
Published: almost 5 years ago
10.3390/mps3030055
Quantitative Microdialysis: Experimental Protocol and Software for Small Molecule Protein Affinity Determination and for Exclusion of Compounds with Poor Physicochemical PropertiesCited by: 3
Author(s): Steven Shave, Nhan T. Pham, Connor B. Śmieja, Manfred Auer
Software Mentions: 1
Published: over 4 years ago
10.1371/journal.pone.0109696
Evolutionary Strategies of Viruses, Bacteria and Archaea in Hydrothermal Vent Ecosystems Revealed through MetagenomicsCited by: 57
Author(s): R. Anderson, Mitchell L. Sogin, John A. Baross
Software Mentions: 1
Published: about 10 years ago
10.1038/s41598-017-18004-7
A hippocampo-cerebellar centred network for the learning and execution of sequence-based navigationCited by: 53
Author(s): Bénédicte M. Babayan, Aurélie Watilliaux, Guillaume Viejo, Anne‐Lise Paradis, Benoît Girard, Laure Rondi-Reig
Software Mentions: 1
Published: almost 7 years ago