Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: pypi: networkx

https://packages.ecosyste.ms/registries/pypi.org/packages/networkx

Python package for creating and manipulating graphs and networks
85 versions
Latest release: about 1 year ago
2,220 dependent packages
31,374,924 downloads last month

Papers Mentioning networkx 110

Chemical Basis of Metabolic Network Organization
Cited by: 12
Author(s): Qiang Zhu, Tao Qin, Yingying Jiang, Cong Ji, De-Xin Kong, Bin-Guang Ma, Hongyu Zhang
Software Mentions: 1
Published: about 13 years ago

10.5402/2012/157135

Classifying Multigraph Models of Secondary RNA Structure Using Graph-Theoretic Descriptors
Cited by: 5
Author(s): Debra J. Knisley, Jeff Knisley, Chelsea Ross, Alissa Rockney
Software Mentions: 1
Published: about 12 years ago

10.1093/brain/awx347

Tau burden and the functional connectome in Alzheimer’s disease and progressive supranuclear palsy
Cited by: 180
Author(s): Thomas E. Cope, Timothy Rittman, Robin Borchert, P. Simon Jones, Deniz Vatansever, Kieren Allinson, Luca Passamonti, Patricia Vázquez Rodríguez, William Richard Bevan-Jones, John T. O′Brien, James B. Rowe
Software Mentions: 1
Published: almost 7 years ago

10.1371/journal.pcbi.1004504

Automated Identification of Core Regulatory Genes in Human Gene Regulatory Networks
Cited by: 29
Author(s): Vipin Narang, Muhamad Azfar Ramli, Amit Singhal, Pavanish Kumar, Gennaro De Libero, Michael Poidinger, Christopher Monterola
Software Mentions: 1
Published: about 9 years ago

10.1007/s00239-021-10018-0

Stoichiometric Modeling of Artificial String Chemistries Reveals Constraints on Metabolic Network Structure
Cited by: 2
Author(s): Devlin C Moyer, Alan R. Pacheco, David B Bernstein, Daniel Segrè
Software Mentions: 1
Published: over 3 years ago

10.3389/fphys.2020.588012

The Large Scale Structure of Human Metabolism Reveals Resilience via Extensive Signaling Crosstalk
Cited by: 9
Author(s): Laura Gómez-Romero, Karina López-Reyes, Enrique Hernández‐Lemus
Software Mentions: 1
Published: almost 4 years ago

10.1186/s12915-021-01013-4

A comprehensive survey of developmental programs reveals a dearth of tree-like lineage graphs and ubiquitous regeneration
Cited by: 5
Author(s): Somya Mani, Tsvi Tlusty
Software Mentions: 1
Published: over 3 years ago

10.3389/fimmu.2021.693142

Unravelling the Shared Genetic Mechanisms Underlying 18 Autoimmune Diseases Using a Systems Approach
Cited by: 13
Author(s): Sreemol Gokuladhas, William Schierding, Evgeniia Golovina, Tayaza Fadason, Justin M. O’Sullivan
Software Mentions: 1
Published: over 3 years ago

10.1186/s12859-018-2102-9

Measuring phenotype-phenotype similarity through the interactome
Cited by: 28
Author(s): Jiajie Peng, Weiwei Hui, Xuequn Shang
Software Mentions: 1
Published: over 6 years ago

10.1038/srep17581

Incorporating Contact Network Structure in Cluster Randomized Trials
Cited by: 25
Author(s): Patrick Staples, Elizabeth L. Ogburn, Jukka Pekka Onnela
Software Mentions: 1
Published: about 9 years ago