Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: pypi: matplotlib

https://packages.ecosyste.ms/registries/pypi.org/packages/matplotlib

Python plotting package
117 versions
Latest release: about 1 year ago
11,562 dependent packages
42,928,923 downloads last month

Papers Mentioning matplotlib 1,045

10.14336/AD.2020.0224
The Mechanism of Downregulated Interstitial Fluid Drainage Following Neuronal Excitation
Cited by: 10
Author(s): Yuanyuan Li, Hongbin Han, Kuangyu Shi, Dehua Cui, Jun Yang, Ian Alberts, Lan Yuan, Guomei Zhao, Rui Wang, Xiao Jiang Cai, Ze Teng
Software Mentions: 2
Published: almost 5 years ago
10.3389/fgene.2021.617915
The Shared Use of Extended Phenotypes Increases the Fitness of Simulated Populations
Cited by: 0
Author(s): G. Araujo, Renan Cipriano Moioli, Sandro J. de Souza
Software Mentions: 2
Published: almost 4 years ago
10.3389/fgene.2020.00675
rboAnalyzer: A Software to Improve Characterization of Non-coding RNAs From Sequence Database Search Output
Cited by: 1
Author(s): Marek Schwarz, Jiřı́ Vohradský, Martin Modrák, Josef Pánek
Software Mentions: 2
Published: over 4 years ago
10.3389/fgene.2020.00608
Genetic Diversity and Low Stratification of the Population of the United Arab Emirates
Cited by: 16
Author(s): Guan K. Tay, Andreas Henschel, Gihan Daw Elbait, Habiba S. Al Safar
Software Mentions: 2
Published: over 4 years ago
10.1371/journal.pone.0249447
MR. Estimator, a toolbox to determine intrinsic timescales from subsampled spiking activity
Cited by: 10
Author(s): F. Paul Spitzner, Jonas Dehning, Jens Wilting, Annika Hagemann, João Pinheiro Neto, Johannes Zierenberg, Viola Priesemann
Software Mentions: 2
Published: over 3 years ago
10.1371/journal.pone.0067302
Assessment and Challenges of Ligand Docking into Comparative Models of G-Protein Coupled Receptors
Cited by: 33
Author(s): Elizabeth Dong Nguyen, Christoffer Norn, Thomas M. Frimurer, Jens Meiler
Software Mentions: 2
Published: over 11 years ago
10.3389/fgene.2019.00224
Polymorphism in Cytochrome P450 3A4 Is Ethnicity Related
Cited by: 26
Author(s): Yelena Guttman, Adi Nudel, Zohar Kerem
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pone.0228983
Using experimental gaming simulations to elicit risk mitigation behavioral strategies for agricultural disease management
Cited by: 19
Author(s): Eric M. Clark, Scott C. Merrill, Luke Trinity, Gabriela Bucini, Nicholas Cheney, Ollin Langle-Chimal, Trisha R. Shrum, Christopher Koliba, Asim Zia, J. J. B. Smith
Software Mentions: 2
Published: over 4 years ago
10.3389/fimmu.2020.620707
Bioinformatic Analysis of the Wound Peptidome Reveals Potential Biomarkers and Antimicrobial Peptides
Cited by: 9
Author(s): Erik Hartman, Karl Wallblom, Mariena J. A. van der Plas, Jitka Petrlová, Jin Cai, Karim Saleh, Sven Kjellström, Artur Schmidtchen
Software Mentions: 2
Published: almost 4 years ago
10.1371/journal.pone.0236378
A promising approach for screening pulmonary hypertension based on frontal chest radiographs using deep learning: A retrospective study
Cited by: 16
Author(s): Xiaoling Zou, Yong Ren, Ding-Yun Feng, Xiaofeng He, Yi Guo, Hailing Yang, Xian Li, Jia Bin Fang, Quan Li, Junjie Ye, Lanqing Han, Tiantuo Zhang
Software Mentions: 2
Published: over 4 years ago
10.1186/s12859-019-2816-3
Time-dependent antagonist-agonist switching in receptor tyrosine kinase-mediated signaling
Cited by: 5
Author(s): Alokendra Ghosh, Ravi Radhakrishnan
Software Mentions: 2
Published: over 5 years ago
10.3389/fmicb.2021.711545
The Differential Growth Inhibition of Phytophthora spp. Caused by the Rare Sugar Tagatose Is Associated With Species-Specific Metabolic and Transcriptional Changes
Cited by: 9
Author(s): Abdessalem Chahed, Valentina Lazazzara, Marco Moretto, Andrea Nesler, Paola E. Corneo, Essaïd Ait Barka, I. Pertot, Gerardo Puopolo, Michele Perazzolli
Software Mentions: 2
Published: over 3 years ago
10.1371/journal.pone.0117619
Researcher Perspectives on Publication and Peer Review of Data
Cited by: 75
Author(s): John Ernest Kratz, Carly Strasser
Software Mentions: 2
Published: over 9 years ago
10.1371/journal.pone.0169931
Non-Homologous End Joining and Homology Directed DNA Repair Frequency of Double-Stranded Breaks Introduced by Genome Editing Reagents
Cited by: 44
Author(s): Michail Zaboikin, Tatiana Zaboikina, Carl E. Freter, Narasimhachar Srinivasakumar
Software Mentions: 2
Published: almost 8 years ago
10.1371/journal.pone.0201353
PSoC-Stat: A single chip open source potentiostat based on a Programmable System on a Chip
Cited by: 40
Author(s): Prattana Lopin, Kyle V. Lopin
Software Mentions: 2
Published: over 6 years ago
10.1186/s12859-017-1927-y
Norgal: extraction and de novo assembly of mitochondrial DNA from whole-genome sequencing data
Cited by: 50
Author(s): Kosai Al-Nakeeb, Thomas Nordahl Petersen, Thomas Sicheritz-Pontén
Software Mentions: 2
Published: about 7 years ago
10.1371/journal.pone.0200280
HappyTools: A software for high-throughput HPLC data processing and quantitation
Cited by: 23
Author(s): Bas C. Jansen, Lise Hafkenscheid, Albert Bondt, Richard A. Gardner, Jenifer L. Hendel, Manfred Wuhrer, Daniel I. R. Spencer
Software Mentions: 2
Published: over 6 years ago
10.1371/journal.pone.0171744
A multi-objective constraint-based approach for modeling genome-scale microbial ecosystems
Cited by: 45
Author(s): Marko Budinich, Jérémie Bourdon, Abdelhalim Larhlimi, Damien Eveillard
Software Mentions: 2
Published: almost 8 years ago
10.3389/fninf.2018.00012
A Density-Driven Method for the Placement of Biological Cells Over Two-Dimensional Manifolds
Cited by: 4
Author(s): Nicolas P. Rougier
Software Mentions: 2
Published: over 6 years ago
10.1371/journal.pgen.1007449
An intronic enhancer of Bmp6 underlies evolved tooth gain in sticklebacks
Cited by: 26
Author(s): Phillip A. Cleves, James C. Hart, Rachel M. Agoglia, Monica T. Jimenez, Priscilla A. Erickson, Linda Gai, Craig T. Miller
Software Mentions: 2
Published: over 6 years ago
10.1371/journal.pcbi.1002567
ProteinHistorian: Tools for the Comparative Analysis of Eukaryote Protein Origin
Cited by: 79
Author(s): John A. Capra, Ann B. Williams, Katherine S. Pollard
Software Mentions: 2
Published: over 12 years ago
10.1371/journal.pcbi.1007741
ProteoClade: A taxonomic toolkit for multi-species and metaproteomic analysis
Cited by: 12
Author(s): Arshag D. Mooradian, Sjoerd van der Post, Kristen M. Naegle, Jason M. Held
Software Mentions: 2
Published: over 4 years ago
10.1371/journal.pcbi.1003833
Ten Simple Rules for Better Figures
Cited by: 85
Author(s): Nicolas P. Rougier, Michael Droettboom, Philip E. Bourne
Software Mentions: 2
Published: about 10 years ago
10.1186/1471-2105-11-9
PyMix - The Python mixture package - a tool for clustering of heterogeneous biological data
Cited by: 19
Author(s): Benjamin Georgi, Ivan G. Costa, Alexander Schliep
Software Mentions: 2
Published: almost 15 years ago
10.3389/fnins.2019.00688
LAB–QA2GO: A Free, Easy-to-Use Toolbox for the Quality Assessment of Magnetic Resonance Imaging Data
Cited by: 10
Author(s): Christoph Vogelbacher, Miriam Bopp, Verena Schuster, Peer Herholz, Andreas Jansen, Jens Sommer
Software Mentions: 2
Published: over 5 years ago
10.3389/fnins.2013.00267
MEG and EEG data analysis with MNE-Python
Cited by: 1,570
Author(s): Alexandre Gramfort
Software Mentions: 2
Published: almost 12 years ago
10.3389/fonc.2021.654685
Deep Learning on Enhanced CT Images Can Predict the Muscular Invasiveness of Bladder Cancer
Cited by: 12
Author(s): Gumuyang Zhang, Zhe Wu, Lili Xu, Xiaoxiao Zhang, Daming Zhang, Li Mao, Xiuli Li, Yu Xiao, Jun Guo, Zhigang Ji, Hao Sun, Zhengyu Jin
Software Mentions: 2
Published: over 3 years ago
10.3389/fonc.2021.570747
Machine Learning Based on Multi-Parametric MRI to Predict Risk of Breast Cancer
Cited by: 10
Author(s): Weijing Tao, Mengjie Lu, Xiaoyu Zhou, Stefania Montemezzi, Genji Bai, Yangming Yue, Xiuli Li, Lun Zhao, Changsheng Zhou, Guangming Lu
Software Mentions: 2
Published: over 3 years ago
10.1371/journal.pcbi.1004389
A Diffusive Homeostatic Signal Maintains Neural Heterogeneity and Responsiveness in Cortical Networks
Cited by: 24
Author(s): Yann Sweeney, Jeanette Hellgren Kotaleski, Matthias H. Hennig
Software Mentions: 2
Published: over 9 years ago
10.1371/journal.pcbi.1002204
Transmembrane Helix Dynamics of Bacterial Chemoreceptors Supports a Piston Model of Signalling
Cited by: 39
Author(s): Benjamin A. Hall, Judith P. Armitage, Mark S. P. Sansom
Software Mentions: 2
Published: about 13 years ago
10.3389/fpls.2021.721558
Genome-Wide Comparative Analysis of R2R3 MYB Gene Family in Populus and Salix and Identification of Male Flower Bud Development-Related Genes
Cited by: 16
Author(s): Fangwei Zhou, Ying-Nan Chen, Huaitong Wu, Tongming Yin
Software Mentions: 2
Published: about 3 years ago
10.3389/fpls.2020.582267
Humic Acid Enhances the Growth of Tomato Promoted by Endophytic Bacterial Strains Through the Activation of Hormone-, Growth-, and Transcription-Related Processes
Cited by: 19
Author(s): Nikoletta Galambos, Stéphane Compant, Marco Moretto, C. Sicher, Gerardo Puopolo, Félix Wäckers, Angela Sessitsch, I. Pertot, Michele Perazzolli
Software Mentions: 2
Published: about 4 years ago
10.3389/fpls.2019.00413
Eco-Friendly Iron-Humic Nanofertilizers Synthesis for the Prevention of Iron Chlorosis in Soybean (Glycine max) Grown in Calcareous Soil
Cited by: 44
Author(s): María Teresa Cieschi, Alexander Yu. Polyakov, В. А. Лебедев, Dmitry S. Volkov, D. А. Pankratov, А. А. Велигжанин, Irina V. Perminova, Juan J. Lucena
Software Mentions: 2
Published: over 5 years ago
10.3389/fpls.2018.00780
High-Throughput Analysis of Arabidopsis Stem Vibrations to Identify Mutants With Altered Mechanical Properties
Cited by: 13
Author(s): Miyuki T Nakata, Masahiro Takahara, Shingo Sakamoto, Kouki Yoshida, Nobutaka Mitsuda
Software Mentions: 2
Published: over 6 years ago
10.3389/fpsyg.2015.01678
Processing of pitch and location in human auditory cortex during visual and auditory tasks
Cited by: 10
Author(s): Suvi Häkkinen, Noora Ovaska, Teemu Rinne
Software Mentions: 2
Published: about 9 years ago
10.1186/s12859-017-1786-6
C-State: an interactive web app for simultaneous multi-gene visualization and comparative epigenetic pattern search
Cited by: 2
Author(s): Divya Tej Sowpati, Surabhi Srivastava, Jyotsna Dhawan, Rakesh Mishra
Software Mentions: 2
Published: about 7 years ago
10.3389/fnsyn.2015.00017
Computational reconstitution of spine calcium transients from individual proteins
Cited by: 48
Author(s): Thomas M. Bartol, Daniel Keller, Justin P. Kinney, Chandrajit L. Bajaj, Kristen M. Harris, Terrence J. Sejnowski, Mary B. Kennedy
Software Mentions: 2
Published: about 9 years ago
10.1371/journal.pbio.1002316
Bromodomain Proteins Contribute to Maintenance of Bloodstream Form Stage Identity in the African Trypanosome
Cited by: 53
Author(s): Danae Schulz, Monica R. Mugnier, Eda Margaret Paulsen, Hee Sook Kim, Chun Wa Chung, David F. Tough, Inmaculada Rioja, Rab K. Prinjha, F. Nina Papavasiliou, Erik Debler
Software Mentions: 2
Published: almost 9 years ago
10.1534/g3.112.003640
Extensive Transcript Diversity and Novel Upstream Open Reading Frame Regulation in Yeast
Cited by: 58
Author(s): Karl Waern, M Snyder
Software Mentions: 2
Published: almost 12 years ago
10.3390/plants9121665
Genome Survey Sequencing of In Vivo Mother Plant and In Vitro Plantlets of Mikania cordata
Cited by: 1
Author(s): Yongfeng Hong, Xia Huang, Chunmei Li, Xiaoxian Ruan, Zhen Wang, Yingjuan Su, Ting Wang
Software Mentions: 2
Published: almost 4 years ago
10.3390/genes10080578
Offline Next Generation Metagenomics Sequence Analysis Using MinION Detection Software (MINDS)
Cited by: 17
Author(s): Samir V. Deshpande, Timothy M Reed, Raymond F. Sullivan, Lee J. Kerkhof, Keith M Beigel, Mary Margaret Wade
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pone.0032776
Ribosomal History Reveals Origins of Modern Protein Synthesis
Cited by: 132
Author(s): Ajith Harish, Gustavo Caetano‐Anollés
Software Mentions: 2
Published: over 12 years ago
10.3390/plants10020341
Rapid Quantification of Microalgae Growth with Hyperspectral Camera and Vegetation Indices
Cited by: 6
Author(s): Pauliina Salmi, Matti A. Eskelinen, Matti T. Leppänen, Ilkka Pölönen
Software Mentions: 2
Published: almost 4 years ago
10.1534/genetics.116.195214
Detecting High-Order Epistasis in Nonlinear Genotype-Phenotype Maps
Cited by: 114
Author(s): Zachary Sailer, Michael J. Harms
Software Mentions: 2
Published: over 7 years ago
10.34133/2021/9842178
Impact of Varying Light and Dew on Ground Cover Estimates from Active NDVI, RGB, and LiDAR
Cited by: 3
Author(s): David M. Deery, D. J. Smith, Robert J. Davy, J.A.J. Berni, G. J. Rebetzke, Richard A. James
Software Mentions: 2
Published: almost 4 years ago
10.3390/pharmaceutics12111071
Antimicrobial Peptide against Mycobacterium Tuberculosis That Activates Autophagy Is an Effective Treatment for Tuberculosis
Cited by: 15
Author(s): Erika A Peláez Coyotl, Jacqueline Barrios Palacios, Gabriel Muciño, Daniel Moreno-Blas, Miguel Costas, Teresa Montiel Montes, Christian Diener, Salvador Uribe‐Carvajal, Lourdes Massieu, Susana Castro-Obregón, Octavio Ramos‐Espinosa, Dulce Mata Espinosa, Jorge Barrios-Payán, Juan Carlos León Contreras, Gerardo Corzo, Rogelio Hernández-Pando, Gabriel del Río
Software Mentions: 2
Published: about 4 years ago
10.3390/pharmaceutics13020284
In Silico Simulation of the Systemic Drug Exposure Following the Topical Application of Opioid Analgesics in Patients with Cutaneous Lesions
Cited by: 5
Author(s): Maksim Khotimchenko, Victor Antontsev, Kaushik Chakravarty, Hypatia Hou, Jyotika Varshney
Software Mentions: 2
Published: over 3 years ago
10.7717/peerj-cs.270
A comparative study of machine learning and deep learning algorithms to classify cancer types based on microarray gene expression data
Cited by: 44
Author(s): Reinel Tabares-Soto, Simón Orozco-Arias, Víctor Romero-Cano, Vanesa Segovia Bucheli, José Luis Rodríguez-Sotelo, Cristian Felipe Jiménez Varón
Software Mentions: 2
Published: over 4 years ago
10.7717/peerj.5862
PromoterPredict: sequence-based modelling of<i>Escherichia coli</i>σ<sup>70</sup>promoter strength yields logarithmic dependence between promoter strength and sequence
Cited by: 18
Author(s): Ramit Bharanikumar, Keshav Aditya R Premkumar, Ashok Palaniappan
Software Mentions: 2
Published: about 6 years ago
10.1093/gbe/evaa086
The Simons Genome Diversity Project: A Global Analysis of Mobile Element Diversity
Cited by: 20
Author(s): W. Scott Watkins, Julie E. Feusier, Jainy Thomas, Clément Goubert, Swapon Mallick, Lynn B. Jorde
Software Mentions: 2
Published: over 4 years ago
10.7717/peerj.918
An elaborate data set on human gait and the effect of mechanical perturbations
Cited by: 59
Author(s): Jason K. Moore, Sandra K. Hnat, Antonie J. van den Bogert
Software Mentions: 2
Published: over 9 years ago
10.7717/peerj.7545
Expansion of sandhill cranes (Grus canadensis) in east Asia during the non-breeding period
Cited by: 2
Author(s): Linqiang Gao, Chunrong Mi, Yumin Guo
Software Mentions: 2
Published: about 5 years ago
10.1074/jbc.RA119.009437
Human leukocyte antigen (HLA) class II peptide flanking residues tune the immunogenicity of a human tumor-derived epitope
Cited by: 7
Author(s): Bruce J. MacLachlan, Garry Dolton, Athanasios Papakyriakou, Alexander Greenshields‐Watson, Georgina H Mason, Andrea J. A. Schauenburg, Matthieu Besneux, Barbara Szomolay, Tim Elliott, Andrew K. Sewell, Awen Gallimore, P.J. Rizkallah, David K. Cole, Andrew Godkin
Software Mentions: 2
Published: almost 5 years ago
10.1117/1.JBO.26.3.038002
Potential of subdermal solar energy harvesting for medical device applications based on worldwide meteorological data
Cited by: 2
Author(s): Maximilien Tholl, Adrian Zurbuchen, Hildegard Tanner, Andreas Haeberlin
Software Mentions: 2
Published: over 3 years ago
10.1007/s10858-012-9669-7
CING: an integrated residue-based structure validation program suite
Cited by: 106
Author(s): Jurgen F. Doreleijers, Alan Wilter Sousa da Silva, Elmar Krieger, Sander B. Nabuurs, Chris A. E. M. Spronk, Tim J. Stevens, Wim Vranken, Gert Vriend, Geerten W. Vuister
Software Mentions: 2
Published: about 12 years ago
10.1007/s10858-019-00247-3
Characterization of H/D exchange in type 1 pili by proton-detected solid-state NMR and molecular dynamics simulations
Cited by: 4
Author(s): Songhwan Hwang, Carl Öster, Veniamin Chevelkov, Karin Giller, Adam Lange, Stefan Becker, Adam Lange
Software Mentions: 2
Published: over 5 years ago
10.1186/1758-2946-3-10
Review of "Data Analysis with Open Source Tools" by Philipp K Janert
Cited by: 3
Author(s): Noel M. O’Boyle
Software Mentions: 2
Published: over 13 years ago
10.1186/1758-2946-5-43
Similarity maps - a visualization strategy for molecular fingerprints and machine-learning methods
Cited by: 110
Author(s): Sereina Riniker, Gregory A. Landrum
Software Mentions: 2
Published: about 11 years ago
10.1186/s13321-015-0090-6
Synergy Maps: exploring compound combinations using network-based visualization
Cited by: 34
Author(s): Richard P. Lewis, Rajarshi Guha, Tamás Korcsmáros, Andreas Bender
Software Mentions: 2
Published: over 9 years ago
10.1186/s13321-016-0121-y
Selectivity profiling of BCRP versus P-gp inhibition: from automated collection of polypharmacology data to multi-label learning
Cited by: 25
Author(s): Floriane Montanari, Barbara Zdrazil, Daniela Digles, Gerhard Ecker
Software Mentions: 2
Published: almost 9 years ago
10.1002/xrs.2727
Increased zinc accumulation in mineralized osteosarcoma tissue measured by confocal synchrotron radiation micro X-ray fluorescence analysis
Cited by: 13
Author(s): Mirjam Rauwolf, Bernhard Pemmer, Andreas Roschger, Anna Turyanskaya, S. Smolek, A. Maderitsch, Peter Hischenhuber, Martin Foelser, R. Simon, Susanna Lang, Stefan Puchner, Reinhard Windhager, Klaus Klaushofer, P. Wobrauschek, Jochen G. Hofstaetter, Paul Roschger, Christina Streli
Software Mentions: 2
Published: almost 8 years ago
10.5811/westjem.2016.11.31262
Differences in Self-expression Re ect Formal Evaluation in a Fourth-year Emergency Medicine Clerkship
Cited by: 2
Author(s): Michael Chary, Amy Leuthauser, Kevin Hu, Braden Hexom
Software Mentions: 2
Published: almost 8 years ago
10.1186/s13321-019-0393-0
Randomized SMILES strings improve the quality of molecular generative models
Cited by: 151
Author(s): Josep Arús‐Pous, Stina Johansson, Oleksii Prykhodko, Esben Jannik Bjerrum, Christian Tyrchan, Jean‐Louis Reymond, Hongming Chen, Ola Engkvist
Software Mentions: 2
Published: about 5 years ago
10.1186/s13321-020-0416-x
Visualization of very large high-dimensional data sets as minimum spanning trees
Cited by: 132
Author(s): Daniel Probst, Jean‐Louis Reymond
Software Mentions: 2
Published: almost 5 years ago
10.12688/wellcomeopenres.9945.2
Hierarchical Bayesian inference for ion channel screening dose-response data
Cited by: 8
Author(s): Ross H. Johnstone, Rémi Bardenet, David Gavaghan, Gary R. Mirams
Software Mentions: 2
Published: over 7 years ago
10.3390/v13081574
A Genome-Wide CRISPR/Cas9 Screen Reveals the Requirement of Host Sphingomyelin Synthase 1 for Infection with Pseudorabies Virus Mutant gD–Pass
Cited by: 6
Author(s): Julia E. Hölper, Finn Grey, J Kenneth Baillie, Tim Regan, Nick Parkinson, Dirk W. Höper, Thiprampai Thamamongood, Martin Schwemmle, Katrin Pannhorst, Lisa Wendt, Thomas C. Mettenleiter, Barbara G. Klupp
Software Mentions: 2
Published: over 3 years ago
10.3390/v10090496
Degenerate PCR Primers to Reveal the Diversity of Giant Viruses in Coastal Waters
Cited by: 22
Author(s): Yanze Li, Pascal Hingamp, Hiroyasu Watai, Hisashi Endo, Takashi Yoshida, Hiroyuki Ogata
Software Mentions: 2
Published: about 6 years ago
10.15252/msb.20188719
Absolute quantification of translational regulation and burden using combined sequencing approaches
Cited by: 53
Author(s): Thomas E. Gorochowski, Irina Chelysheva, Mette Eriksen, Priyanka Nair, Steen Pedersen, Zoya Ignatova
Software Mentions: 2
Published: over 5 years ago
10.3390/polym12081652
Viscoelastic Effects on Drop Deformation Using a Machine Learning-Enhanced, Finite Element method
Cited by: 2
Author(s): Juan Luis Ravé Prieto
Software Mentions: 2
Published: over 4 years ago
10.3390/polym12112547
General-Purpose Coarse-Grained Toughened Thermoset Model for 44DDS/DGEBA/PES
Cited by: 3
Author(s): Michael M. Henry, Stephen Thomas, M Alberts, Carla E. Estridge, Brittan Farmer, Olivia McNair
Software Mentions: 2
Published: about 4 years ago
10.1073/pnas.2100466118
Comprehensive pregnancy monitoring with a network of wireless, soft, and flexible sensors in high- and low-resource health settings
Cited by: 32
Author(s): Dennis Ryu, Dong Hyun Kim, Joan T. Price, Jong Yoon Lee, Ha Uk Chung, E. D. Allen, Jessica Walter, Hyoyoung Jeong, Jingyue Cao, Е. В. Куликова, H. Abu-Zayed, Rachel Lee, Knute L. Martell, Michael Zhang, Brianna R. Kampmeier, Marc Hill, Joo Hee Lee, Edward Kim, Yerim Park, Hokyung Jang, Hany Arafa, Claire Liu, Maureen Chisembele, Bellington Vwalika, Ntazana Sindano, Bridget Spelke, Amy S. Paller, Ashish Premkumar, William A. Grobman, Jeffrey S. A. Stringer, John A. Rogers, Shuai Xu
Software Mentions: 2
Published: over 3 years ago
10.3390/ijms14010684
A Molecular-Modeling Toolbox Aimed at Bridging the Gap between Medicinal Chemistry and Computational Sciences
Cited by: 12
Author(s): Sameh Eid, Adam Zalewski, Martin Smieško, Beat Ernst, Angelo Vedani
Software Mentions: 2
Published: almost 12 years ago
10.1098/rsos.160494
Sensitivity of marine protected area network connectivity to atmospheric variability
Cited by: 51
Author(s): Alan Fox, Lea‐Anne Henry, David Corne, J. Murray Roberts
Software Mentions: 2
Published: about 8 years ago
10.3390/molecules24050890
Machine Learning Analyses on Data including Essential Oil Chemical Composition and In Vitro Experimental Antibiofilm Activities against Staphylococcus Species
Cited by: 37
Author(s): Alexandros Patsilinakos, Marco Artini, Rosanna Papa, Manuela Sabatino, Mijat Božović, Stefania Garzoli, Gianluca Vrenna, Raissa Buzzi, Stefano Manfredini, Laura Selan, Rino Ragno
Software Mentions: 2
Published: over 5 years ago
10.3390/molecules25010154
Photochromic and Photocatalytic Properties of Ultra-Small PVP-Stabilized WO3 Nanoparticles
Cited by: 9
Author(s): Д. А. Козлов, A. B. Shcherbakov, T. O. Kozlova, Borislav Angelov, G. P. Kopitsa, А.В. Гаршев, А. Е. Baranchikov, О. С. Иванова, В. К. Иванов
Software Mentions: 2
Published: almost 5 years ago
10.1038/s41597-019-0235-y
A cone-beam X-ray computed tomography data collection designed for machine learning
Cited by: 21
Author(s): Henri Der Sarkissian, Felix Lucka, Maureen van Eijnatten, Giulia Colacicco, Sophia Bethany Coban, Kees Joost Batenburg
Software Mentions: 2
Published: about 5 years ago
10.3390/molecules26071912
Accelerated Repurposing and Drug Development of Pulmonary Hypertension Therapies for COVID-19 Treatment Using an AI-Integrated Biosimulation Platform
Cited by: 13
Author(s): Kaushik Chakravarty, Victor Antontsev, Maksim Khotimchenko, Nilesh Gupta, Aditya Jagarapu, Yogesh Bundey, Hypatia Hou, Neha Maharao, Jyotika Varshney
Software Mentions: 2
Published: over 3 years ago
10.3390/molecules26082148
Effect of the Hydration Shell on the Carbonyl Vibration in the Ala-Leu-Ala-Leu Peptide
Cited by: 2
Author(s): Irtaza Hassan, Federica Ferraro, Petra Imhof
Software Mentions: 2
Published: over 3 years ago
10.3390/ijms21165814
DispHred: A Server to Predict pH-Dependent Order–Disorder Transitions in Intrinsically Disordered Proteins
Cited by: 14
Author(s): Jaime Santos, Valentín Iglesias, Carlos Pintado, Juan Santos-Suárez, Salvador Ventura
Software Mentions: 2
Published: over 4 years ago
10.1038/srep15084
Distinct roles of the RasGAP family proteins in C. elegans associative learning and memory
Cited by: 18
Author(s): Marton David Gyurko, Péter Csermely, Csaba Söti, Attila Steták
Software Mentions: 2
Published: about 9 years ago
10.1038/srep22376
Microfluidic colloid filtration
Cited by: 48
Author(s): John Linkhorst, Torsten Beckmann, Dennis Go, Alexander J. C. Kuehne, Matthias Weßling
Software Mentions: 2
Published: over 8 years ago
10.3390/molecules26092454
Group Contribution Estimation of Ionic Liquid Melting Points: Critical Evaluation and Refinement of Existing Models
Cited by: 7
Author(s): Dhruve Kumar Mital, Paul Nancarrow, Samira Zeinab, Nabil Abdel Jabbar, Taleb H. Ibrahim, Mustafa Khamis, Alnoman Taha
Software Mentions: 2
Published: over 3 years ago
10.1038/srep09467
Strong influence of behavioral dynamics on the ability of testing and treating HIV to stop transmission
Cited by: 18
Author(s): Christopher J. Henry, James S. Koopman
Software Mentions: 2
Published: over 9 years ago
10.1038/s41598-017-07599-6
Automated Training of Deep Convolutional Neural Networks for Cell Segmentation
Cited by: 109
Author(s): Sajith Kecheril Sadanandan, Petter Ranefall, Sylvie Le Guyader, Carolina Wählby
Software Mentions: 2
Published: over 7 years ago
10.3390/ijms21249728
Biased Ligands Differentially Shape the Conformation of the Extracellular Loop Region in 5-HT2B Receptors
Cited by: 8
Author(s): Katrin Denzinger, Trung Ngoc Nguyen, Theresa Noonan, Gerhard Wolber, Marcel Bermudez
Software Mentions: 2
Published: almost 4 years ago
10.1038/s41598-017-17752-w
Immune microenvironment of experimental rat C6 gliomas resembles human glioblastomas
Cited by: 62
Author(s): Anna Gieryng, Dominika Pszczolkowska, Katarzyna Bocian, Michał Dąbrowski, Wenson D. Rajan, Michal Kloss, Jakub Mieczkowski, Bożena Kamińska
Software Mentions: 2
Published: almost 7 years ago
10.1038/s41598-018-28016-6
The Biological Object Notation (BON): a structured file format for biological data
Cited by: 1
Author(s): Jan P. Buchmann, Mathieu Fourment, Edward C. Holmes
Software Mentions: 2
Published: over 6 years ago
10.1038/s41598-018-29575-4
Ocean sprawl facilitates dispersal and connectivity of protected species
Cited by: 44
Author(s): Lea‐Anne Henry, C. Gabriela Mayorga Adame, Alan Fox, Jeff A. Polton, Joseph Ferris, Faron McLellan, Chris McCabe, Tina Kutti, J. Murray Roberts
Software Mentions: 2
Published: over 6 years ago
10.1264/jsme2.ME19037
The Earth Is Small for “Leviathans”: Long Distance Dispersal of Giant Viruses across Aquatic Environments
Cited by: 11
Author(s): Yanze Li, Hisashi Endo, Yasuhiro Gotoh, Hiroyasu Watai, Nana Ogawa, Romain Blanc-Mathieu, Takashi Yoshida, Hiroyuki Ogata
Software Mentions: 2
Published: almost 6 years ago
10.1038/s41598-018-32476-1
In silico proteomic and phylogenetic analysis of the outer membrane protein repertoire of gastric Helicobacter species
Cited by: 21
Author(s): E Bauwens, Myrthe Joosten, Joemar Taganna, Mirko Rossi, Ayla Debraekeleer, Chin Yen Tay, Fanny Peters, Steffen Backert, James G. Fox, Richard Ducatelle, Han Remaut, Freddy Haesebrouck, Annemieke Smet
Software Mentions: 2
Published: about 6 years ago
10.1111/acel.13100
The lipid elongation enzyme ELOVL2 is a molecular regulator of aging in the retina
Cited by: 58
Author(s): Daniel Chen, Daniel L. Chao, Lorena Rocha, Matthew J. Kolar, Viet Anh Nguyen Huu, Michał Krawczyk, Manish Dasyani, Tina Wang, Maryam Jafari, Mary Jabari, Kevin D. Ross, Alan Saghatelian, Bruce A. Hamilton, Kang Zhang, Dorota Skowronska‐Krawczyk
Software Mentions: 2
Published: almost 5 years ago
10.1016/j.ymeth.2021.01.008
TopoStats – A program for automated tracing of biomolecules from AFM images
Cited by: 16
Author(s): Joseph G. Beton, Robert Moorehead, Luzie Helfmann, Robert Gray, Bart W. Hoogenboom, Agnel Praveen Joseph, Maya Topf, Alice L. B. Pyne
Software Mentions: 2
Published: about 3 years ago
10.3390/metabo11020107
Chemical Elicitors Induce Rare Bioactive Secondary Metabolites in Deep-Sea Bacteria under Laboratory Conditions
Cited by: 5
Author(s): Rafael de Felício, Patricia Ballone, C. Bazzano, Luiz Fernando Giolo Alves, Renata Sigrist, Gina Polo, Henrique Niero, Fernanda Rodrigues-Costa, Arthur Zanetti Nunes Fernandes, Luciane A. Chimetto Tonon, Luciana S. Paradela, Renna Karoline Eloi Costa, Sandra Martha Gomes Dias, Andréa Dessen, Guilherme P. Telles, Marcus Adonai Castro da Silva, André Oliveira de Souza Lima, Daniela Barretto Barbosa Trivella
Software Mentions: 2
Published: almost 4 years ago
10.3390/ijms22063129
Functional Characterisation of Three Glycine N-Acyltransferase Variants and the Effect on Glycine Conjugation to Benzoyl–CoA
Cited by: 3
Author(s): Johann M. Rohwer, Chantelle Schutte, Rencia van der Sluis
Software Mentions: 2
Published: over 3 years ago
10.1038/s41598-019-43005-z
Discovery of selective activators of PRC2 mutant EED-I363M
Cited by: 11
Author(s): Junghyun L. Suh, Kimberly D. Barnash, Tigran M. Abramyan, Fengling Li, Juliana The, Isabelle A. Engelberg, Masoud Vedadi, Peter J. Brown, Dmitri Kireev, C.H. Arrowsmith, Lindsey I. James, Stephen V. Frye
Software Mentions: 2
Published: over 5 years ago
10.1186/s12936-021-03788-x
Using deep learning to identify recent positive selection in malaria parasite sequence data
Cited by: 10
Author(s): Wouter Deelder, Ernest Diez Benavente, Jody Phelan, Emilia Mańko, Susana Campino, Luigi Palla, Taane G. Clark
Software Mentions: 2
Published: over 3 years ago
10.3390/ijms22073585
Gene Expression Analysis of Induced Plum pox virus (Sharka) Resistance in Peach (Prunus persica) by Almond (P. dulcis) Grafting
Cited by: 5
Author(s): M. Rubio, Pedro J. Martínez-García, Azam Nikbakht Dehkordi, Ángela S. Prudencio, E. Gómez, Bernardo Rodamilans, F. Dicenta, Juan Antonio Garcı́a, Pedro Martínez‐Gómez
Software Mentions: 2
Published: over 3 years ago
10.1038/s41598-019-48913-8
Accurate Classification of Biological and non-Biological Interfaces in Protein Crystal Structures using Subtle Covariation Signals
Cited by: 6
Author(s): Yoshinori Fukasawa, Kentaro Tomii
Software Mentions: 2
Published: about 5 years ago
10.1038/s41598-019-53682-5
The Role of Parvalbumin-positive Interneurons in Auditory Steady-State Response Deficits in Schizophrenia
Cited by: 11
Author(s): Christoph Metzner, Bartosz Zurowski, Volker Steuber
Software Mentions: 2
Published: almost 5 years ago
10.1038/s41598-019-55573-1
Computational discovery of hidden breaks in 28S ribosomal RNAs across eukaryotes and consequences for RNA Integrity Numbers
Cited by: 25
Author(s): Paschalis Natsidis, Philipp H. Schiffer, Irepan Salvador-Martínez, Maximilian J. Telford
Software Mentions: 2
Published: almost 5 years ago