pypi: matplotlib | Projects | Ecosyste.ms: Papers

10.1371/journal.pcbi.1005665

Automatic analysis and 3D-modelling of Hi-C data using TADbit reveals structural features of the fly chromatin colors
Cited by: 226
Author(s): François Serra, Davide Baù, Mike Goodstadt, David Castillo, Guillaume J. Filion, Marc A. Martí‐Renom
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-021-88115-9

VEHiCLE: a Variationally Encoded Hi-C Loss Enhancement algorithm for improving and generating Hi-C data
Cited by: 11
Author(s): Max Highsmith, Jianlin Cheng
Software Mentions: 1
Published: over 3 years ago

10.1371/journal.pone.0236366

Dissecting efficiency of a 5’ rapid amplification of cDNA ends (5’-RACE) approach for profiling T-cell receptor beta repertoire
Cited by: 7
Author(s): Yu Hung Lin, Sheng Jou Hung, Yi Lin Chen, Chunru Lin, Te Fang Kung, Y. Yeh, Joseph T. Tseng, Tsunglin Liu
Software Mentions: 1
Published: over 4 years ago

10.1038/s41598-019-42479-1

An in vivo wound healing model for the characterization of the angiogenic process and its modulation by pharmacological interventions
Cited by: 7
Author(s): Marcel Schneider, Horea-Ioan Ioanas, Jael Xandry, Markus Rudin
Software Mentions: 1
Published: over 5 years ago

10.1007/s00018-021-03858-y

Integrin-dependent migratory switches regulate the translocation of Toxoplasma-infected dendritic cells across brain endothelial monolayers
Cited by: 8
Author(s): Emily C. Ross, Arne L. ten Hoeve, Antonio Barragán
Software Mentions: 1
Published: over 3 years ago

10.7759/cureus.15695

Easily Created Prediction Model Using Automated Artificial Intelligence Framework (Prediction One, Sony Network Communications Inc., Tokyo, Japan) for Subarachnoid Hemorrhage Outcomes Treated by Coiling and Delayed Cerebral Ischemia
Cited by: 7
Author(s): Masahito Katsuki, Shin Kawamura, Akihito Koh
Software Mentions: 1
Published: over 3 years ago

10.1038/s41598-018-32071-4

Strike-slip 23 January 2018 MW 7.9 Gulf of Alaska rare intraplate earthquake: Complex rupture of a fracture zone system
Cited by: 30
Author(s): Anne Krabbenhoeft, Roland von Huene, John J. Miller, Dietrich Lange, Felipe Vera
Software Mentions: 1
Published: about 6 years ago

10.1371/journal.pcbi.1003063

Biases in the Experimental Annotations of Protein Function and Their Effect on Our Understanding of Protein Function Space
Cited by: 101
Author(s): Alexandra M. Schnoes, David C. Ream, Alexander W. Thorman, Patricia C. Babbitt, Iddo Friedberg
Software Mentions: 1
Published: over 11 years ago

10.1016/j.cell.2021.02.017

Rigidity percolation uncovers a structural basis for embryonic tissue phase transitions
Cited by: 83
Author(s): Nicoletta I. Petridou, Bernat Corominas-Murtra, Carl‐Philipp Heisenberg, Édouard Hannezo
Software Mentions: 1
Published: over 3 years ago

10.1038/s41598-018-29529-w

Zn2+-triggered self-assembly of Gonadorelin [6-D-Phe] to produce nanostructures and fibrils
Cited by: 6
Author(s): Yordanka Yordanova, Willem Vanderlinden, Raphael Stoll, Daniel Rüdiger, Andreas Tosstorff, W Zaremba, Gerhard Winter, Stefan Zahler, Wolfgang Frieß
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pcbi.1000956

Bistability in Apoptosis by Receptor Clustering
Cited by: 38
Author(s): Kenneth L. Ho, Heather A. Harrington
Software Mentions: 1
Published: about 14 years ago

10.1038/s41598-018-27149-y

Year-to-year Variability in Arctic Minimum Sea Ice Extent and its Preconditions in Observations and the CESM Large Ensemble Simulations
Cited by: 12
Author(s): Wenchang Yang, Guðrún Magnúsdóttir
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-021-94960-5

Examining the interplay between face mask usage, asymptomatic transmission, and social distancing on the spread of COVID-19
Cited by: 45
Author(s): Adam Catching, Sara Capponi, Ming Te Yeh, Simone Bianco, Raul Andino
Software Mentions: 1
Published: over 3 years ago

10.1038/s41598-021-96108-x

Separation of surface oxide from bulk Ni by selective Ni 3p photoelectron spectroscopy for chemical analysis in coincidence with Ni M-edge Auger electrons
Cited by: 0
Author(s): Artur Born, Fredrik Johansson, Torsten Leitner, Danilo Kühn, Andreas Lindblad, Nils Mårtensson, Alexander Föhlisch
Software Mentions: 1
Published: over 3 years ago

10.1371/journal.pone.0167357

Stable Host Gene Expression in the Gut of Adult Drosophila melanogaster with Different Bacterial Mono-Associations
Cited by: 22
Author(s): Carolyn Elya, Vivian Zhang, William B. Ludington, Michael B. Eisen
Software Mentions: 1
Published: almost 8 years ago

10.1038/s41598-021-98525-4

Modeling seasonal emergence of Poa annua in urban greenspace
Cited by: 2
Author(s): Dallas R. Taylor, Michael Prorock, Brandon J. Horvath, James T. Brosnan
Software Mentions: 1
Published: about 3 years ago

10.1038/s41598-018-23028-8

Lagrangian coherent structure assisted path planning for transoceanic autonomous underwater vehicle missions
Cited by: 34
Author(s): Antonio G. Ramos, Víctor J. García-Garrido, Ana M. Mancho, Stephen Wiggins, Josep Coca, Scott Glenn, Oscar Schofield, J. Kohút, David Aragon, John Kerfoot, Tina Haskins, Travis Miles, Chip Haldeman, Nilsen Strandskov, Ben Allsup, Clayton Jones, Jacob Shapiro
Software Mentions: 1
Published: over 6 years ago

10.1016/j.dib.2019.104513

Simulated vertical electric field data: An estimation from an improved coupling model for the lithosphere-atmosphere-ionosphere system
Cited by: 1
Author(s): B. E. Prokhorov, О. В. Золотов, Marina Knyazeva, Yulia V. Romanovskaya
Software Mentions: 1
Published: about 5 years ago

10.1186/s13229-021-00425-x

Increased aperiodic gamma power in young boys with Fragile X Syndrome is associated with better language ability
Cited by: 37
Author(s): Carol L. Wilkinson, Charles A. Nelson
Software Mentions: 1
Published: over 3 years ago

10.3390/s17010020

Simultaneous Moisture Content and Mass Flow Measurements in Wood Chip Flows Using Coupled Dielectric and Impact Sensors
Cited by: 4
Author(s): Pengmin Pan, Timothy P. McDonald, John P. Fulton, Brian K. Via, John Y. Hung
Software Mentions: 1
Published: almost 8 years ago

10.3390/s17051172

Characterizing Dynamic Walking Patterns and Detecting Falls with Wearable Sensors Using Gaussian Process Methods
Cited by: 15
Author(s): Tae‐Hwan Kim, Jeong-Ho Park, Seongman Heo, Keehoon Sung, Jooyoung Park
Software Mentions: 1
Published: over 7 years ago

10.1016/j.dib.2020.106152

Data on post bank customer reviews from web
Cited by: 2
Author(s): Andrei Plotnikov, Alexey Shcheludyakov, V. P. Cherdantsev, Alexey Bochkarev, Igor Zagoruiko
Software Mentions: 1
Published: about 4 years ago

10.3390/s18082445

Intrusion Detection and Prevention in CoAP Wireless Sensor Networks Using Anomaly Detection
Cited by: 27
Author(s): Jorge Granjal, João M. Silva, Nuno Lourenço
Software Mentions: 1
Published: over 6 years ago

10.12688/f1000research.16169.3

A thermodynamic description for physiological transmembrane transport
Cited by: 0
Author(s): Marco Arieli Herrera-Valdez
Software Mentions: 1
Published: over 3 years ago

10.3390/s19071602

Alpha Radiation-Induced Luminescence by Am-241 in Aqueous Nitric Acid Solution
Cited by: 4
Author(s): Thomas Kerst, Rikard Malmbeck, Nidhu lal Banik, Juha Toivonen
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pgen.1006641

Analysis of the human monocyte-derived macrophage transcriptome and response to lipopolysaccharide provides new insights into genetic aetiology of inflammatory bowel disease
Cited by: 94
Author(s): J Kenneth Baillie, Erik Arner, Carsten O. Daub, Michiel de Hoon, Masayoshi Itoh, Hideya Kawaji, Timo Lassmann, Piero Carninci, Alistair R.R. Forrest, Yoshihide Hayashizaki, Geoffrey J. Faulkner, Christine A. Wells, Michael Rehli, Paul Pavli, Kim M. Summers, David Hume
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pgen.1005762

Base J and H3.V Regulate Transcriptional Termination in Trypanosoma brucei
Cited by: 50
Author(s): Danae Schulz, Maryam Zaringhalam, F. Nina Papavasiliou, Hee-Sook Kim
Software Mentions: 1
Published: almost 9 years ago

10.1038/srep45096

Evaluation of Different Oligonucleotide Base Substitutions at CpG Binding sites in Multiplex Bisulfite-PCR sequencing
Cited by: 0
Author(s): Jennifer Lu, Kelin Ru, Ida Candiloro, Alexander Dobrovic, Darren Korbie, Matt Trau
Software Mentions: 1
Published: over 7 years ago

10.1038/srep44560

Both Drosophila matrix metalloproteinases have released and membrane-tethered forms but have different substrates
Cited by: 33
Author(s): Kimberly S. LaFever, Xiaoxi Wang, Patrick Page-McCaw, Gautam Bhave, Andrea Page-McCaw
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pone.0247236

Molecular dynamics investigation of the interaction between Colletotrichum capsici cutinase and berberine suggested a mechanism for reduced enzyme activity
Cited by: 5
Author(s): Ying Liu, Jinqing Wei, Huizhen Yang, Jindong Dai, Xizhen Ge
Software Mentions: 1
Published: almost 4 years ago

10.1038/srep41489

A deforestation-induced tipping point for the South American monsoon system
Cited by: 94
Author(s): Niklas Boers, Norbert Marwan, Henrique de Melo Jorge Barbosa, Jürgen Kurths
Software Mentions: 1
Published: almost 8 years ago

10.1038/srep37639

Antimicrobial Peptide Potency is Facilitated by Greater Conformational Flexibility when Binding to Gram-negative Bacterial Inner Membranes
Cited by: 60
Author(s): Sarah-Beth T. A. Amos, Louic S. Vermeer, Philip M. Ferguson, Justyna Kozłowska, Matthew Davy, Tam T. Bui, Alex F. Drake, Christian D. Lorenz, A. James Mason
Software Mentions: 1
Published: almost 8 years ago

10.3390/s20123366

A “Global–Local” Visual Servo System for Picking Manipulators
Cited by: 2
Author(s): Yinggang Shi, Wei Zhang, Zhiwen Li, Yong Wang, Li Liu, Yongjie Cui
Software Mentions: 1
Published: over 4 years ago

10.1093/database/bax097

GRONS: a comprehensive genetic resource of nicotine and smoking
Cited by: 2
Author(s): Zhonghai Fang, Yichen Yang, Yanshi Hu, Ming D. Li, Ju Wang
Software Mentions: 1
Published: almost 8 years ago

10.1371/journal.pone.0157942

RNA-Seq Based Analysis of Population Structure within the Maize Inbred B73
Cited by: 25
Author(s): Zhikai Liang, James C. Schnable
Software Mentions: 1
Published: over 8 years ago

10.1093/bioinformatics/btx148

ConKit: a python interface to contact predictions
Cited by: 17
Author(s): Felix Šimkovic, Jens M. H. Thomas, Daniel J. Rigden
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pone.0239403

Disentangling primer interactions improves SARS-CoV-2 genome sequencing by multiplex tiling PCR
Cited by: 147
Author(s): Kentaro Itokawa, Tsuyoshi Sekizuka, Masanori Hashino, Rina Tanaka, Makoto Kuroda
Software Mentions: 1
Published: about 4 years ago

10.3390/s20247124

Deep Learning-Based Cell-Level and Beam-Level Mobility Management System
Cited by: 5
Author(s): Roman Klus, Lucie Klus, Dmitrii Solomitckii, Jukka Talvitie, Mikko Valkama
Software Mentions: 1
Published: almost 4 years ago

10.1186/s12859-017-1626-8

Segmentum: a tool for copy number analysis of cancer genomes
Cited by: 7
Author(s): Ebrahim Afyounian, Matti Annala, Matti Nykter
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pone.0076909

Development of Scoring Functions for Antibody Sequence Assessment and Optimization
Cited by: 19
Author(s): Daniel Seeliger
Software Mentions: 1
Published: about 11 years ago

10.1038/s41597-020-0434-6

A synthetic energy dataset for non-intrusive load monitoring in households
Cited by: 48
Author(s): Christoph Klemenjak, Christoph Kovatsch, Manuel Herold, Wilfried Elmenreich
Software Mentions: 1
Published: over 4 years ago

10.3390/s21062153

C-UNet: Complement UNet for Remote Sensing Road Extraction
Cited by: 29
Author(s): Yuewu Hou, Zhaoying Liu, Ting Zhang, Yujian Li
Software Mentions: 1
Published: over 3 years ago

10.1371/journal.pone.0230901

PET segmentation of bulky tumors: Strategies and workflows to improve inter-observer variability
Cited by: 16
Author(s): Elisabeth Pfaehler, Coreline N. Burggraaff, Gem Kramer, Josée M. Zijlstra, Otto S. Hoekstra, Mathilde Jalving, Walter Noordzij, Adrienne H. Brouwers, Marc G. Stevenson, Johan de Jong, Ronald Boellaard
Software Mentions: 1
Published: over 4 years ago

10.14336/AD.2018.1206

The Drainage of Interstitial Fluid in the Deep Brain is Controlled by the Integrity of Myelination
Cited by: 26
Author(s): Aibo Wang, Rui Wang, Dehua Cui, Xinrui Huang, Lan Yuan, Huipo Liu, Yu Fu, Liang Liu, Wei Wang, Qichun He, Ce Shi, Xiangping Guan, Ze Teng, Guomei Zhao, Yuanyuan Li, Yajuan Gao, Hongbin Han
Software Mentions: 1
Published: almost 6 years ago

Projects: pypi: matplotlib

Papers Mentioning matplotlib 1,045