pypi: matplotlib | Projects | Ecosyste.ms: Papers

10.3389/fgene.2020.616743

Identification of a Goat Intersexuality-Associated Novel Variant Through Genome-Wide Resequencing and Hi-C
Cited by: 2
Author(s): E Guang‐Xin, Dong‐Ke Zhou, Zhuqing Zheng, Bo Yang, Xianglong Li, Lanhui Li, Rongyan Zhou, Wen-Hui Nai, Xunping Jiang, Jiahua Zhang, Qionghua Hong, Yue Ma, Mingxing Chu, Huijiang Gao, Yongju Zhao, Xinghai Duan, Yanan He, Risu Na, Yilin Han, Yan Zeng, Yu Jiang, Yongfu Huang
Software Mentions: 1
Published: almost 4 years ago

10.1186/1471-2105-11-S12-S13

IPRStats: visualization of the functional potential of an InterProScan run
Cited by: 12
Author(s): Ryan J Kelly, David E. Vincent, Iddo Friedberg
Software Mentions: 1
Published: almost 14 years ago

10.1016/j.str.2018.01.007

Saposin Lipid Nanoparticles: A Highly Versatile and Modular Tool for Membrane Protein Research
Cited by: 63
Author(s): Ali Flayhan, Haydyn D. T. Mertens, Yonca Ural-Blimke, Maria Martinez Molledo, Dmitri I. Svergun, Christian Löw
Software Mentions: 1
Published: almost 7 years ago

10.1016/j.str.2019.05.004

Membrane Recognition and Binding by the Phosphatidylinositol Phosphate Kinase PIP5K1A: A Multiscale Simulation Study
Cited by: 20
Author(s): Sarah-Beth T. A. Amos, Antreas C. Kalli, Jiye Shi, Mark S.P. Sansom
Software Mentions: 1
Published: over 5 years ago

10.7554/eLife.06394

Genome-wide errant targeting by Hairy
Cited by: 13
Author(s): Kurtulus Kok, Ahmet Ay, Li Min Li, David N. Arnosti
Software Mentions: 1
Published: about 9 years ago

10.1371/journal.pone.0031690

iCanPlot: Visual Exploration of High-Throughput Omics Data Using Interactive Canvas Plotting
Cited by: 9
Author(s): Amit Sinha, Scott A. Armstrong
Software Mentions: 1
Published: over 12 years ago

10.7717/peerj.9470

Predicting the effect of variants on splicing using Convolutional Neural Networks
Cited by: 2
Author(s): Thanyathorn Thanapattheerakul, Worrawat Engchuan, Jonathan H. Chan
Software Mentions: 1
Published: over 4 years ago

10.7717/peerj.11140

Understanding experiments and research practices for reproducibility: an exploratory study
Cited by: 15
Author(s): Sheeba Samuel, Birgitta König‐Ries
Software Mentions: 1
Published: over 3 years ago

10.1186/s13059-020-02178-x

SVFX: a machine learning framework to quantify the pathogenicity of structural variants
Cited by: 21
Author(s): Sushant Kumar, Arif Harmanci, Jagath Vytheeswaran, Mark Gerstein
Software Mentions: 1
Published: about 4 years ago

10.1186/s12909-021-02870-x

The impact of artificial intelligence on clinical education: perceptions of postgraduate trainee doctors in London (UK) and recommendations for trainers
Cited by: 23
Author(s): Maya Banerjee, Daphne Chiew, Keval Tushar Patel, Ieuan Johns, Digby Chappell, N Linton, Graham Cole, Dárrel P. Francis, Jo Szram, Jack Ross, Sameer Zaman
Software Mentions: 1
Published: over 3 years ago

10.1038/tp.2016.153

Loss of promoter IV-driven BDNF expression impacts oscillatory activity during sleep, sensory information processing and fear regulation
Cited by: 42
Author(s): Joanne M. Hill, Nicholas F. Hardy, Dennisse V. Jimenez, Kristen R. Maynard, Alisha Kardian, C J Pollock, Robert J. Schloesser, Keri Martinowich
Software Mentions: 1
Published: about 8 years ago

10.1038/s41398-018-0334-0

A signature-based machine learning model for distinguishing bipolar disorder and borderline personality disorder
Cited by: 57
Author(s): Imanol Pérez Arribas, Guy M. Goodwin, John Geddes, Terry Lyons, Kate Saunders
Software Mentions: 1
Published: almost 6 years ago

10.3389/fmicb.2018.01629

Superficieibacter electus gen. nov., sp. nov., an Extended-Spectrum β-Lactamase Possessing Member of the Enterobacteriaceae Family, Isolated From Intensive Care Unit Surfaces
Cited by: 7
Author(s): Robert F. Potter, Alaric W. D’Souza, Meghan A. Wallace, Angela Shupe, Sanket Patel, Danish Gul, Jennie H. Kwon, Wandy L. Beatty, Saadia Andleeb, Carey-Ann D. Burnham, Gautam Dantas
Software Mentions: 1
Published: over 6 years ago

10.1167/tvst.10.6.32

Assessing the Clinical Utility of Expanded Macular OCTs Using Machine Learning
Cited by: 9
Author(s): Alex T.L. Lin, Cecilia S. Lee, Marian Blazes, Aaron Lee, Michael B. Gorin
Software Mentions: 1
Published: over 3 years ago

10.1371/journal.pone.0158894

Distinctive Recognition of Flagellin by Human and Mouse Toll-Like Receptor 5
Cited by: 19
Author(s): Vida Forstnerič, Karolina Ivičak-Kocjan, Ajasja Ljubetič, Roman Jerala, Mojca Benčina
Software Mentions: 1
Published: over 8 years ago

10.1186/1471-2334-11-207

Mitigating effects of vaccination on influenza outbreaks given constraints in stockpile size and daily administration capacity
Cited by: 6
Author(s): Mayteé Cruz-Aponte, Erin C. McKiernan, Marco Arieli Herrera-Valdez
Software Mentions: 1
Published: over 13 years ago

10.1371/journal.pone.0119656

Biotransformation of the Mycotoxin Deoxynivalenol in Fusarium Resistant and Susceptible Near Isogenic Wheat Lines
Cited by: 79
Author(s): Bernhard Kluger, Christoph Bueschl, Marc Lemmens, Herbert Michlmayr, Alexandra Malachová, Andrea Koutnik, Imer Maloku, Franz Berthiller, Gerhard Adam, Rudolf Krska, Rainer Schuhmacher
Software Mentions: 1
Published: over 9 years ago

10.12688/f1000research.6209.2

Tourette Syndrome research highlights 2014
Cited by: 15
Author(s): Cheryl Richards, Kevin J. Black
Software Mentions: 1
Published: over 9 years ago

10.1098/rsif.2013.0288

Visualization of system dynamics using phasegrams
Cited by: 31
Author(s): Christian T. Herbst, Hanspeter Herzel, Jan G. Švec, Megan T. Wyman, W. Tecumseh Fitch
Software Mentions: 1
Published: over 11 years ago

10.1371/journal.pone.0008201

Whole Genome Duplications and a ‘Function’ for Junk DNA? Facts and Hypotheses
Cited by: 10
Author(s): Reiner A. Veitia, Samuel Bottani
Software Mentions: 1
Published: almost 15 years ago

10.7717/peerj-cs.495

AI-driven deep CNN approach for multi-label pathology classification using chest X-Rays
Cited by: 39
Author(s): Saleh Albahli, Hafiz Tayyab Rauf, Abdulelah Algosaibi, Valentina E. Balas
Software Mentions: 1
Published: over 3 years ago

10.3390/genes9100482

Conservation of k-mer Composition and Correlation Contribution between Introns and Intergenic Regions of Animalia Genomes
Cited by: 11
Author(s): Aaron Sievers, Frederik Wenz, Michael Hausmann, Georg Hildenbrand
Software Mentions: 1
Published: about 6 years ago

10.3390/genes8040122

K-mer Content, Correlation, and Position Analysis of Genome DNA Sequences for the Identification of Function and Evolutionary Features
Cited by: 34
Author(s): Aaron Sievers, Katharina Bosiek, Marc Bisch, Chris Dreeßen, Jascha Riedel, Patrick Froß, Michael Hausmann, Georg Hildenbrand
Software Mentions: 1
Published: over 7 years ago

10.1093/g3journal/jkab243

Insights from the first genome assembly of Onion (<i>Allium cepa</i>)
Cited by: 24
Author(s): Richard Finkers, Martijn van Kaauwen, Kai Ament, Karin Burger-Meijer, Raymond Egging, Henk Huits, Linda Kodde, L.P.N.M. Kroon, Masayoshi Shigyo, Shusei Sato, Ben Vosman, Wilbert van Workum, O.E. Scholten
Software Mentions: 1
Published: over 3 years ago

10.1523/ENEURO.0461-20.2020

Suboptimal Discontinuous Current-Clamp Switching Rates Lead to Deceptive Mouse Neuronal Firing
Cited by: 6
Author(s): Marin Manuel
Software Mentions: 1
Published: almost 4 years ago

10.1371/journal.pbio.3000553

Image-based analysis of living mammalian cells using label-free 3D refractive index maps reveals new organelle dynamics and dry mass flux
Cited by: 58
Author(s): Patrick A. Sandoz, Christopher Claude Giuseppe Tremblay, F. Gisou van der Goot, Mathieu Fréchin
Software Mentions: 1
Published: almost 5 years ago

10.1534/g3.113.007062

Genetic Determinants of Cell Size at Birth and Their Impact on Cell Cycle Progression in Saccharomyces cerevisiae
Cited by: 15
Author(s): Sandra K. Truong, Ryan F. McCormick, Michael Polymenis
Software Mentions: 1
Published: about 11 years ago

10.3389/fnsys.2013.00124

The effect of theta-burst TMS on cognitive control networks measured with resting state fMRI
Cited by: 98
Author(s): Caterina Gratton, Taraz G. Lee, Emi Nomura, Mark D’Esposito
Software Mentions: 1
Published: almost 12 years ago

10.1186/s12859-017-1469-3

AfterQC: automatic filtering, trimming, error removing and quality control for fastq data
Cited by: 245
Author(s): Shifu Chen, Tanxiao Huang, Yanqing Zhou, Yue Han, Mingyan Xu, Jia Gu
Software Mentions: 1
Published: over 7 years ago

10.3389/fpsyg.2017.02029

Computational Psychometrics for the Measurement of Collaborative Problem Solving Skills
Cited by: 23
Author(s): Stephen T. Polyak, Alina A. von Davier, Kurt Peterschmidt
Software Mentions: 1
Published: almost 7 years ago

10.3389/fnagi.2020.585873

Early Long-Term Memory Impairment and Changes in the Expression of Synaptic Plasticity-Associated Genes, in the McGill-R-Thy1-APP Rat Model of Alzheimer's-Like Brain Amyloidosis
Cited by: 7
Author(s): Martín Habif, Sonia Do Carmo, María Verónica Báez, Natalia Claudia Colettis, Magalí Cecilia Cercato, Daniela Alejandra Salas, María Florencia Acutain, Caterina Laura Sister, Valeria Laura Berkowicz, María Pilar Canal, Tomás González Garello, A. Claudio Cuello, Diana Jerusalinsky
Software Mentions: 1
Published: almost 4 years ago

10.3389/fpsyg.2020.01055

The “Sound of Silence” in a Neonatal Intensive Care Unit—Listening to Speech and Music Inside an Incubator
Cited by: 12
Author(s): Matthias Bertsch, Christoph Reuter, Isabella Czedik-Eysenberg, Angelika Berger, Monika Olischar, Lisa Bartha‐Doering, Vito Giordano
Software Mentions: 1
Published: over 4 years ago

10.3389/fimmu.2021.666742

Designing Multi-Antigen Vaccines Against Acinetobacter baumannii Using Systemic Approaches
Cited by: 23
Author(s): Michael J. McConnell, Antonio J. Martín-Galiano
Software Mentions: 1
Published: over 3 years ago

10.1186/s12862-016-0715-z

Deciphering the recent phylogenetic expansion of the originally deeply rooted Mycobacterium tuberculosis lineage 7
Cited by: 13
Author(s): Solomon Abebe Yimer, Amine Namouchi, Ephrem Debebe Zegeye, Carol Holm‐Hansen, Gunnstein Norheim, Meseret Abebe, Abraham Aseffa, Tone Tønjum
Software Mentions: 1
Published: over 8 years ago

10.1371/journal.pbio.3000346

Fully automated leg tracking of Drosophila neurodegeneration models reveals distinct conserved movement signatures
Cited by: 14
Author(s): Shuang Wu, Kah Junn Tan, Lakshmi Narasimhan Govindarajan, James Stewart, Lin Gu, Joses Ho, Malvika Katarya, Boon Hui Wong, Eng‐King Tan, Daiqin Li, Adam Claridge‐Chang, Camilo Libedinsky, Li Cheng, Sherry Aw
Software Mentions: 1
Published: over 5 years ago

10.16910/jemr.12.3.1

Effects of an active visuomotor steering task on covert attention
Cited by: 2
Author(s): Samuel Tuhkanen, Jami Pekkanen, Esko Lehtonen, Otto Lappi
Software Mentions: 1
Published: over 5 years ago

10.3389/fgene.2016.00118

Design Space Toolbox V2: Automated Software Enabling a Novel Phenotype-Centric Modeling Strategy for Natural and Synthetic Biological Systems
Cited by: 12
Author(s): Jason G. Lomnitz, Michael A. Savageau
Software Mentions: 1
Published: over 8 years ago

10.7554/eLife.68548

Structural intermediates observed only in intact Escherichia coli indicate a mechanism for TonB-dependent transport
Cited by: 16
Author(s): Thushani D. Nilaweera, David A. Nyenhuis, David S. Cafiso
Software Mentions: 1
Published: over 3 years ago

10.3389/fimmu.2018.00126

Mouse Models of Influenza Infection with Circulating Strains to Test Seasonal Vaccine Efficacy
Cited by: 37
Author(s): Helen Groves, Jacqueline U. McDonald, Pinky Langat, Ekaterina Kinnear, Paul Kellam, John W. McCauley, Joanna Ellis, Catherine Thompson, Ruth A. Elderfield, Luke Parker, William Barclay, John S. Tregoning
Software Mentions: 1
Published: almost 7 years ago

10.3389/fimmu.2021.609884

Utilizing Computational Machine Learning Tools to Understand Immunogenic Breadth in the Context of a CD8 T-Cell Mediated HIV Response
Cited by: 5
Author(s): Ed McGowan, Rachel Rosenthal, Andrew Fioré-Gartland, Gladys Macharia, Sheila N. Balinda, Anne Kapaata, Gisele Umviligihozo, Erick M. O. Muok, Jama Dalel, Claire Streatfield, Helen Coutinho, Darío Dilernia, Daniela C. Mónaco, David R. Morrison, Ling Yue, Eric Hunter, Morten Nielsen, Jill Gilmour, Jonathan Hare
Software Mentions: 1
Published: almost 4 years ago

10.1186/s13045-018-0692-3

Long non-coding RNAs defining major subtypes of B cell precursor acute lymphoblastic leukemia
Cited by: 35
Author(s): Alva Rani James, M. Schroêder, Martin Neumann, Lorenz Bastian, Cornelia Eckert, Nicola Gökbuget, Jutta Ortiz Tanchez, Cornelia Schlee, Konstandina Isaakidis, Stefan Schwartz, Thomas Burmeister, Arend von Stackelberg, Michael A. Rieger, Stefanie Göllner, Martin Horstman, Martin Schrappe, Renate Kirschner-Schwabe, Monika Brüggemann, Carsten Müller‐Tidow, Hubert Serve, Altuna Akalin, Claudia D. Baldus
Software Mentions: 1
Published: almost 6 years ago

10.1038/s10038-020-00874-x

Genome-wide association study of individual differences of human lymphocyte profiles using large-scale cytometry data
Cited by: 9
Author(s): Daigo Okada, Norimasa Nakamura, Kazuya Setoh, Takahisa Kawaguchi, Koichiro Higasa, Yasuharu Tabara, Fumihiko Matsuda, Ryūji Yamada
Software Mentions: 1
Published: almost 4 years ago

10.1007/s00405-021-06682-z

An objective, markerless videosystem for staging facial palsy
Cited by: 3
Author(s): Simonetta Monini, S. Ripoli, Chiara Filippi, Irene Fatuzzo, Gerardo Salerno, Edoardo Covelli, Fabiano Bini, Franco Marinozzi, Silvia Marchelletta, Gianluca Manni, Maurizio Barbara
Software Mentions: 1
Published: over 3 years ago

10.1371/journal.pbio.1001625

MYRF Is a Membrane-Associated Transcription Factor That Autoproteolytically Cleaves to Directly Activate Myelin Genes
Cited by: 194
Author(s): Helena Bujalka, Matthias Koenning, Stacey Jackson, Victoria M. Perreau, Bernard J. Pope, Curtis M. Hay, Stanislaw Mitew, Andrew F. Hill, Qiumin Lu, Michael Wegner, Rajini Srinivasan, John Svaren, Melanie Willingham, Ben A. Barres, Ben Emery
Software Mentions: 1
Published: over 11 years ago

10.1007/s10654-020-00649-w

Dynamic interventions to control COVID-19 pandemic: a multivariate prediction modelling study comparing 16 worldwide countries
Cited by: 201
Author(s): Rajiv Chowdhury, Kevin Heng, Md Shajedur Rahman Shawon, Gabriel Goh, Daisy Okonofua, Carolina Ochoa‐Rosales, Valentina González-Jaramillo, Abbas Bhuiya, Daniel D. Reidpath, Shamini Prathapan, Sara Shahzad, Christian L. Althaus, Nathalia González-Jaramillo, Oscar H. Franco
Software Mentions: 1
Published: over 4 years ago

10.3389/fcell.2021.696428

DNA Methylation of PGC-1α Is Associated With Elevated mtDNA Copy Number and Altered Urinary Metabolites in Autism Spectrum Disorder
Cited by: 14
Author(s): Sophia Bam, Erin Michelle Buchanan, Caitlyn Mahony, Colleen O’Ryan
Software Mentions: 1
Published: over 3 years ago

10.1186/s12872-021-02239-4

Takotsubo syndrome as an overlooked and elusive cause of a single episode of dyspnea in young women: a case report
Cited by: 0
Author(s): Sung Eun Lee, Yoon Sh, Hyo Jung Kang, Jung Hwan Ahn
Software Mentions: 1
Published: about 3 years ago

10.2196/25859

App Use and Usability of a Barcode-Based Digital Platform to Augment COVID-19 Contact Tracing: Postpilot Survey and Paradata Analysis
Cited by: 14
Author(s): Thomas Scherr, Jenna Maria DeSousa, Carson Paige Moore, Austin N. Hardcastle, David W. Wright
Software Mentions: 1
Published: over 3 years ago

10.1371/journal.pone.0068326

Pursuit Eye-Movements in Curve Driving Differentiate between Future Path and Tangent Point Models
Cited by: 45
Author(s): Otto Lappi, Jami Pekkanen, Teemu Itkonen
Software Mentions: 1
Published: over 11 years ago

10.3390/ijerph17020453

Forecast of Dengue Cases in 20 Chinese Cities Based on the Deep Learning Method
Cited by: 47
Author(s): Jiucheng Xu, Kai Xu, Zhichao Li, Fanliang Meng, Taotian Tu, Lei Xu, Qiyong Liu
Software Mentions: 1
Published: almost 5 years ago

10.1371/journal.pone.0172101

Ultra-deep sequencing reveals high prevalence and broad structural diversity of hepatitis B surface antigen mutations in a global population
Cited by: 23
Author(s): Mikael Gencay, Kirsten Hübner, Peter Gohl, Anja Seffner, Michael Weizenegger, Dionysios Neofytos, Richard Batrla, A. Woeste, Hyun Sook Kim, Gastón Westergaard, Christine Reinsch, Eva Brill, Phạm Thị Thu Thúy, Bùi Hữu Hoàng, Mark Sonderup, Wendy Spearman, Stephan Pabinger, Jérémie Gautier, Giuseppina Brancaccio, M. Fasano, T. Santantonio, Giovanni Battista Gaeta, Markus Nauck, Wolfgang E. Kaminski
Software Mentions: 1
Published: over 7 years ago

10.1021/acsnano.1c03626

Porous Honeycomb Self-Assembled Monolayers: Tripodal Adsorption and Hidden Chirality of Carboxylate Anchored Triptycenes on Ag
Cited by: 21
Author(s): Saunak Das, Giulia Nascimbeni, Rodrigo Ortiz de la Morena, Fumitaka Ishiwari, Yoshiaki Shoji, Takanori Fukushima, Manfred Buck, Egbert Zojer, Michael Zharnikov
Software Mentions: 1
Published: over 3 years ago

10.1155/2017/7618419

Understanding Mind-Body Interaction from the Perspective of East Asian Medicine
Cited by: 8
Author(s): Ye-Seul Lee, Yeonhee Ryu, Won-Mo Jung, Jung-Joo Kim, Taehyung Lee, Younbyoung Chae
Software Mentions: 1
Published: almost 8 years ago

10.7554/eLife.65304

The corticospinal tract primarily modulates sensory inputs in the mouse lumbar cord
Cited by: 15
Author(s): Yunuen Moreno-López, Charlotte Bichara, Gilles Delbecq, Philippe Isope, Matilde Cordero-Erausquin
Software Mentions: 1
Published: about 3 years ago

10.1371/journal.pone.0170395

Clinical practice of analysis of anti-drug antibodies against interferon beta and natalizumab in multiple sclerosis patients in Europe: A descriptive study of test results
Cited by: 32
Author(s): Jenny Link, Ryan Ramanujam, Michael Auer, Malin Ryner, Signe Hässler, Delphine Bachelet, Cyprien Mbogning, Clemens Warnke, Dorothea Buck, Poul Erik Jensen, Claudia Sievers, Kathleen Ingenhoven, Nicolás Fissolo, Raija L. P. Lindberg, Verena Grummel, Naoimnh Donnellan, M. Comabella, Xavier Montalbán, Bernd C. Kieseier, Per Soelberg Sørensen, Hans‐Peter Hartung, Tobias Derfuss, Andy Lawton, Daniel J. Sikkema, Marc Pallardy, Bernhard Hemmer, Florian Deisenhammer, Philippe Broet, Pierre Dönnes, Julie Davidson, Anna Fogdell‐Hahn
Software Mentions: 1
Published: almost 8 years ago

10.1371/journal.pone.0134263

Inactivation of ca10a and ca10b Genes Leads to Abnormal Embryonic Development and Alters Movement Pattern in Zebrafish
Cited by: 15
Author(s): Ashok Aspatwar, Martti Tolvanen, Markus Ojanen, Harlan Barker, Anni Saralahti, Carina A. Bäuerlein, Csaba Ortutay, Pei Pan, Marianne Kuuslahti, Mataleena Parikka, Mika Rämet, Seppo Parkkila
Software Mentions: 1
Published: over 9 years ago

10.1371/journal.pone.0249285

Machine learning methods to predict mechanical ventilation and mortality in patients with COVID-19
Cited by: 37
Author(s): Limin Yu, Alexandra Halalau, Bhavinkumar Dalal, Amr E. Abbas, Felicia A. Ivascu, Mitual Amin, Girish B. Nair
Software Mentions: 1
Published: over 3 years ago

10.1371/journal.pone.0229144

Systematic analysis of the binding behaviour of UHRF1 towards different methyl- and carboxylcytosine modification patterns at CpG dyads
Cited by: 11
Author(s): Markus Schneider, Carina Trummer, Andreas Stengl, Peng Zhang, Aleksandra Szwagierczak, M. Cristina Cardoso, Heinrich Leonhardt, Christina Bauer, Iris Antes
Software Mentions: 1
Published: over 4 years ago

10.3389/fphys.2019.00925

Mapping the Tooth Enamel Proteome and Amelogenin Phosphorylation Onto Mineralizing Porcine Tooth Crowns
Cited by: 21
Author(s): Daniel R. Green, Fabian Schulte, Kyu-Ha Lee, Megan K. Pugach, Markus Hardt, Felicitas B. Bidlack
Software Mentions: 1
Published: over 5 years ago

10.3389/fphys.2020.00452

Practical Use of Regularization in Individualizing a Mathematical Model of Cardiovascular Hemodynamics Using Scarce Data
Cited by: 11
Author(s): Ali Tivay, Xin Jin, Alex Kai-Yuan Lo, Christopher G. Scully, Jin-Oh Hahn
Software Mentions: 1
Published: over 4 years ago

10.1186/s12859-019-2859-5

Soybean-VCF2Genomes: a database to identify the closest accession in soybean germplasm collection
Cited by: 3
Author(s): Jung Min Ha, Ho Hwi Jeon, Dong U Woo, Yejin Lee, Halim Park, Joohyeong Lee, Yang Jae Kang
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-020-67620-3

Uncovering transport, deposition and impact of radionuclides released after the early spring 2020 wildfires in the Chernobyl Exclusion Zone
Cited by: 14
Author(s): Nikolaos Evangeliou, Sabine Eckhardt
Software Mentions: 1
Published: over 4 years ago

10.3390/brainsci11091167

Extensions of Granger Causality Calculations on Brain Networks for Efficient and Accurate Seizure Focus Identification via iEEGs
Cited by: 2
Author(s): Victor Yang, Joseph R. Madsen
Software Mentions: 1
Published: about 3 years ago

10.3389/fphar.2019.00925

In Silico Study of Anti-Insomnia Mechanism for Suanzaoren Prescription
Cited by: 9
Author(s): Jian Gao, Qiming Wang, Yuwei Huang, Kailin Tang, Xue Yang, Zhiwei Cao
Software Mentions: 1
Published: over 5 years ago

10.1093/aobpla/plx042

The phyllochron of well-watered and water deficit mature peach trees varies with shoot type and vigour
Cited by: 7
Author(s): Anna Davidson, David Da Silva, Theodore M. DeJong
Software Mentions: 1
Published: about 7 years ago

10.3389/fphar.2019.00549

Computational Identification of Novel Kir6 Channel Inhibitors
Cited by: 5
Author(s): Xingyu Chen, Arthur Garon, Marcus Wieder, Marien J C Houtman, Eva-Maria Zangerl-Plessl, Thierry Langer, Marcel A G van der Heyden, Anna Stary-Weinzinger
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-020-71916-9

The SDGs and human well-being: a global analysis of synergies, trade-offs, and regional differences
Cited by: 49
Author(s): Jan‐Emmanuel De Neve, Jeffrey D. Sachs
Software Mentions: 1
Published: about 4 years ago

10.3390/antibiotics9110834

Antimicrobial Resistance Patterns in Organic and Conventional Dairy Herds in Sweden
Cited by: 8
Author(s): Karin Sjöström, Rachel A. Hickman, Viktoria Tepper, Gabriela Olmos Antillón, Josef D. Järhult, Ulf Emanuelson, Nils Fall, Susanna Sternberg Lewerin
Software Mentions: 1
Published: about 4 years ago

10.1038/s41598-020-75463-1

Resolving the data asynchronicity in high-speed atomic force microscopy measurement via the Kalman Smoother
Cited by: 8
Author(s): Syozo Kubo, Suguru Kato, Kazuyuki Nakamura, Noriyuki Kodera, Shoji Takada
Software Mentions: 1
Published: about 4 years ago

10.1038/s41598-020-64111-3

Spatiotemporal distribution of ground-level ozone in China at a city level
Cited by: 59
Author(s): Yang Gao, Yuhong Liu, Xianneng Li
Software Mentions: 1
Published: over 4 years ago

10.3389/fonc.2021.677051

Doublecortin-Like Kinase 1 (DCLK1) Is a Novel NOTCH Pathway Signaling Regulator in Head and Neck Squamous Cell Carcinoma
Cited by: 11
Author(s): Esther Channah Broner, Jonathan Trujillo, Michael Korzinkin, Tejaswini Subbannayya, Nishant Agrawal, Ivan V. Ozerov, Alex Zhavoronkov, Lisa M. Rooper, Nikita Kotlov, Le Shen, Alexander T. Pearson, Ari J. Rosenberg, Peter A. Savage, Vasudha Mishra, Aditi Chatterjee, David Sidransky, Evgeny Izumchenko
Software Mentions: 1
Published: over 3 years ago

10.7554/eLife.21616

Early dysfunction and progressive degeneration of the subthalamic nucleus in mouse models of Huntington's disease
Cited by: 23
Author(s): Jeremy F. Atherton, Eileen L. McIver, Matthew R.M. Mullen, David L. Wokosin, D. James Surmeier, Mark D. Bevan
Software Mentions: 1
Published: almost 8 years ago

10.3389/fonc.2020.611571

Whole-Lesion Histogram Analysis of the Apparent Diffusion Coefficient as a Quantitative Imaging Biomarker for Assessing the Level of Tumor-Infiltrating Lymphocytes: Value in Molecular Subtypes of Breast Cancer
Cited by: 15
Author(s): Wenjie Tang, Zhe Jin, Yanling Zhang, Yongquan Liang, Zixuan Cheng, Lei-Xin Chen, Yingying Liang, Xinhua Wei, Qingcong Kong, Yuan Guo, Xinqing Jiang
Software Mentions: 1
Published: almost 4 years ago

10.1038/s41598-020-77314-5

Overdrive pacing of spiral waves in a model of human ventricular tissue
Cited by: 9
Author(s): Sergei Pravdin, Timofei Epanchintsev, Alexander Panfilov
Software Mentions: 1
Published: almost 4 years ago

10.3389/fnins.2014.00220

Processing of spatial sounds in human auditory cortex during visual, discrimination and 2-back tasks
Cited by: 5
Author(s): Teemu Rinne, Heidi Ala-Salomäki, G. Christopher Stecker, Jukka Pätynen, Tapio Lokki
Software Mentions: 1
Published: over 10 years ago

10.1002/brb3.1814

Using machine‐learning approach to distinguish patients with methamphetamine dependence from healthy subjects in a virtual reality environment
Cited by: 17
Author(s): Xinfang Ding, Yuanhui Li, Dai Li, Ling Li, Xiuyun Liu
Software Mentions: 1
Published: about 4 years ago

10.1186/s12859-018-2320-1

Selection of marker genes for genetic barcoding of microorganisms and binning of metagenomic reads by Barcoder software tools
Cited by: 3
Author(s): Adeola Mujidat Rotimi, Rian Pierneef, Oleg N. Reva
Software Mentions: 1
Published: about 6 years ago

10.1038/s42003-019-0494-3

Acquisition of temporal order requires an intact CA3 commissural/associational (C/A) feedback system in mice
Cited by: 12
Author(s): Brittney M. Cox, Conor D. Cox, Benjamin G. Gunn, Aliza A. Le, Victoria Inshishian, Christine M. Gall, Gary Lynch
Software Mentions: 1
Published: over 5 years ago

10.1038/s42003-020-0985-2

Transcriptional profiling of lung macrophages identifies a predictive signature for inflammatory lung disease in preterm infants
Cited by: 19
Author(s): Debashis Sahoo, Livia S. Zaramela, Gilberto E. Hernandez, Uyen Mai, Sahar Taheri, Dharanidhar Dang, Ashley N. Stouch, Rachel M. Medal, Alyssa M. McCoy, Judy L. Aschner, Timothy S. Blackwell, Karsten Zengler, Lawrence S. Prince
Software Mentions: 1
Published: over 4 years ago

10.4269/ajtmh.17-0762

The Burden of Dengue Fever and Chikungunya in Southern Coastal Ecuador: Epidemiology, Clinical Presentation, and Phylogenetics from the First Two Years of a Prospective Study
Cited by: 35
Author(s): Anna M. Stewart-Ibarra, Sadie J. Ryan, Aileen Kenneson, Christine A. King, Mark Abbott, Arturo Barbachano-Guerrero, Efraín Beltrán-Ayala, Mercy J. Borbor-Córdova, Washington B. Cárdenas, Cinthya Cueva, Julia L. Finkelstein, Christina D. Lupone, Richard G. Jarman, Irina Maljkovic Berry, Saurabh Mehta, Mark E. Polhemus, Mercy Silva, Timothy P. Endy
Software Mentions: 1
Published: over 6 years ago

10.1007/s13239-020-00473-z

Experimental Assessment of Two Non-Contrast MRI Sequences Used for Computational Fluid Dynamics: Investigation of Consistency Between Techniques
Cited by: 1
Author(s): Conor James MacDonald, Rudolf Hellmuth, Lukasz Priba, Elizabeth J. Murphy, Stephen J. Gandy, Shona Z. Matthew, Rose Ross, John G. Houston
Software Mentions: 1
Published: over 4 years ago

10.1186/1471-2105-14-136

Compression-based distance (CBD): a simple, rapid, and accurate method for microbiota composition comparison
Cited by: 5
Author(s): Fang Yang, Nicholas Chia, Bryan A. White, Lawrence B. Schook
Software Mentions: 1
Published: over 11 years ago

10.1038/s41598-020-60371-1

Factors affecting ENSO predictability in a linear empirical model of tropical air-sea interactions
Cited by: 3
Author(s): Harun Rashid
Software Mentions: 1
Published: over 4 years ago

10.1016/j.bpj.2017.05.031

Comparative Visualization of the RNA Suboptimal Conformational Ensemble In Vivo
Cited by: 32
Author(s): Chanin Tolson Woods, Lela Lackey, Benfeard Williams, Nikolay V. Dokholyan, David Gotz, Alain Laederach
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-021-81264-x

A new framework for MR diffusion tensor distribution
Cited by: 14
Author(s): Kulam Najmudeen Magdoom, Sinisa Pajevic, Dario Gasbarra, Peter J. Basser
Software Mentions: 1
Published: almost 4 years ago

10.1007/s00392-021-01880-5

Poor humoral and T-cell response to two-dose SARS-CoV-2 messenger RNA vaccine BNT162b2 in cardiothoracic transplant recipients
Cited by: 67
Author(s): René Schramm, Angelika Costard‐Jäckle, Rasmus Rivinius, Bastian Fischer, Benjamin Müller, Udo Boeken, Assad Haneya, Zdeněk Provazník, Cornelius Knabbe, Jan Gummert
Software Mentions: 1
Published: over 3 years ago

10.1038/s41598-021-82969-9

Semantic segmentation of reflectance confocal microscopy mosaics of pigmented lesions using weak labels
Cited by: 12
Author(s): Marissa D’Alonzo, Alican Bozkurt, Christi Alessi‐Fox, Melissa Gill, Dana H. Brooks, Milind Rajadhyaksha, Katsumi Kose, Jennifer Dy
Software Mentions: 1
Published: almost 4 years ago

10.1007/s00402-019-03129-3

Investigation of thermally induced damage to surrounding nerve tissue when using curettage and cementation of long bone tumours, modelled in cadaveric porcine femurs
Cited by: 1
Author(s): T. A. Murphy, John Mathews, Michael R Whitehouse, Richard P. Baker
Software Mentions: 1
Published: almost 6 years ago

10.3390/ijms22073793

Predicting the Structure and Dynamics of Membrane Protein GerAB from Bacillus subtilis
Cited by: 5
Author(s): Sophie Blinker, Jocelyne Vreede, Peter Setlow, Stanley Brul
Software Mentions: 1
Published: over 3 years ago

10.7554/eLife.34414

Robust manipulation of the behavior of Drosophila melanogaster by a fungal pathogen in the laboratory
Cited by: 51
Author(s): Carolyn Elya, Tin Ching Lok, Quinn E Spencer, Hayley C. McCausland, Ciera C. Martinez, Michael B. Eisen
Software Mentions: 1
Published: over 6 years ago

10.7554/eLife.61339

Magnesium efflux from Drosophila Kenyon cells is critical for normal and diet-enhanced long-term memory
Cited by: 5
Author(s): Yanhua Wu, Yosuke Funato, Eleonora Meschi, Kristijan D Jovanoski, Hiroaki Miki, Scott Waddell
Software Mentions: 1
Published: almost 4 years ago

10.1038/s41598-021-84510-4

Deep learning systems detect dysplasia with human-like accuracy using histopathology and probe-based confocal laser endomicroscopy
Cited by: 12
Author(s): Shan Guleria, Tilak Shah, J Vincent Pulido, Matthew Fasullo, Lubaina Ehsan, Robert Lippman, Rasoul Sali, Pritesh Mutha, Lin Cheng, Donald E. Brown, Sana Syed
Software Mentions: 1
Published: over 3 years ago

10.1038/s41598-021-85522-w

Consecutive ruptures on a complex conjugate fault system during the 2018 Gulf of Alaska earthquake
Cited by: 8
Author(s): Shinji Yamashita, Y. Yagi, Ryo Okuwaki, Keiko Shimizu, Ryoichiro Agata, Yukitoshi Fukahata
Software Mentions: 1
Published: over 3 years ago

10.1038/s41598-021-84029-8

In depth characterisation of the biomolecular coronas of polymer coated inorganic nanoparticles with differential centrifugal sedimentation
Cited by: 7
Author(s): André Perez‐Potti, Hender López, Beatriz Pelaz, Abuelmagd M. Abdelmonem, Mahmoud G. Soliman, Ingmar Schoen, Philip M. Kelly, Kenneth A. Dawson, Wolfgang J. Parak, Željka Krpetić, Marco P. Monopoli
Software Mentions: 1
Published: over 3 years ago

10.3389/fchem.2019.00155

1,4-Disubstituted 1H-1,2,3-Triazole Containing Peptidotriazolamers: A New Class of Peptidomimetics With Interesting Foldamer Properties
Cited by: 14
Author(s): David C. Schröder, Oliver Kracker, Tanja Fröhr, Jerzy Góra, Michał Jewgiński, Anke Nieß, Iris Antes, Rafał Latajka, Antoine Marion, Norbert Sewald
Software Mentions: 1
Published: over 5 years ago

10.3389/fnins.2015.00378

The effect of precision and power grips on activations in human auditory cortex
Cited by: 18
Author(s): Patrik Wikman, Lari Vainio, Teemu Rinne
Software Mentions: 1
Published: about 9 years ago

10.3390/ijms22073699

Molecular Biomechanics Controls Protein Mixing and Segregation in Adherent Membranes
Cited by: 4
Author(s): Long Li, Bernd Henning Stumpf, Ana‐Sunčana Smith
Software Mentions: 1
Published: over 3 years ago

10.1186/1475-2875-13-262

Genetic diversity and population structure of Plasmodium vivax in Central China
Cited by: 23
Author(s): Yaobao Liu, Sarah Auburn, Jun Cao, Hidayat Trimarsanto, Huayun Zhou, Karen-Ann Gray, Taane G. Clark, Ric N. Price, Qin Cheng, Rui Huang, Qi Gao
Software Mentions: 1
Published: over 10 years ago

10.1038/s41598-021-87810-x

Diversification of terpenoid emissions proposes a geographic structure based on climate and pathogen composition in Japanese cedar
Cited by: 10
Author(s): Tsutom Hiura, Hayate Yoshioka, Sou Matsunaga, Takuya Saito, Tetsuo I. Kohyama, Norihisa Kusumoto, Kentaro Uchiyama, Yoshihisa Suyama, Yoshihiko Tsumura
Software Mentions: 1
Published: over 3 years ago

10.3389/fnins.2021.646013

Bidirectional Mapping of Brain MRI and PET With 3D Reversible GAN for the Diagnosis of Alzheimer’s Disease
Cited by: 37
Author(s): Wanyun Lin, Wei-Ming Lin, Gang Chen, Hejun Zhang, Qinquan Gao, Yechong Huang, Tong Tong, Min Du, Alzheimer’s Disease Neuroimaging Initiative
Software Mentions: 1
Published: over 3 years ago

Projects: pypi: matplotlib

Papers Mentioning matplotlib 1,045