Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: pypi: match

https://packages.ecosyste.ms/registries/pypi.org/packages/match

Match tokenized words and phrases within the original, untokenized, often messy, text.
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Latest release: almost 2 years ago
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Papers Mentioning match 17

Profiling temporal dynamics of acetogenic communities in anaerobic digesters using next-generation sequencing and T-RFLP
Cited by: 10
Author(s): Abhijeet Singh, Bettina Müller, Anna Schnürer
Software Mentions: 8
Published: about 3 years ago

10.1371/journal.pcbi.1000193

Analysis of Gene Regulatory Networks in the Mammalian Circadian Rhythm
Cited by: 236
Author(s): Jun Yan, Haifang Wang, Yuting Liu, Chunxuan Shao
Software Mentions: 6
Published: almost 16 years ago

10.1371/journal.pone.0092663

Towards Decrypting Cryptobiosis—Analyzing Anhydrobiosis in the Tardigrade Milnesium tardigradum Using Transcriptome Sequencing
Cited by: 48
Author(s): Chong Wang, Markus A. Grohme, Brahim Mali, Ralph O. Schill, Marcus Frohme
Software Mentions: 5
Published: over 10 years ago

10.1371/journal.pone.0214389

Free-view gait recognition
Cited by: 12
Author(s): Yonghong Tian, Wei Lan, Shijian Lu, Tiejun Huang
Software Mentions: 3
Published: over 5 years ago

10.1016/j.cortex.2015.10.021

Movement priming of EEG/MEG brain responses for action-words characterizes the link between language and action
Cited by: 58
Author(s): Giovanna Mollo, Friedemann Pulvermüller, Olaf Hauk
Software Mentions: 3
Published: over 8 years ago

10.1186/1472-6807-7-50

Comparative Analysis of Protein Structure Alignments
Cited by: 85
Author(s): Gabriele Mayr, Francisco S. Domingues, Peter Lackner
Software Mentions: 3
Published: about 17 years ago

10.1371/journal.pone.0025776

DNA-Based Faecal Dietary Analysis: A Comparison of qPCR and High Throughput Sequencing Approaches
Cited by: 113
Author(s): Dáithí C. Murray, Michael Bunce, Belinda Cannell, Rebecca Oliver, Jayne Houston, Nicole E. White, Roberto A. Barrero, M. Bellgard, James Haile
Software Mentions: 2
Published: almost 13 years ago

10.1371/journal.pone.0071360

The Effect of Primer Choice and Short Read Sequences on the Outcome of 16S rRNA Gene Based Diversity Studies
Cited by: 119
Author(s): Jonas Ghyselinck, Stefan Pfeiffer, Kim Heylen, Angela Sessitsch, Paul De Vos
Software Mentions: 2
Published: about 11 years ago

10.1093/dnares/dsu014

Draft Sequences of the Radish (Raphanus sativus L.) Genome
Cited by: 156
Author(s): Hiroyasu Kitashiba, Li Feng, Hideki Hirakawa, Takahiro Kawanabe, Zhongwei Zou, Yoichi Hasegawa, Kaoru Tonosaki, Sachiko Shirasawa, Aki Fukushima, Shuji Yokoi, Yoshihito Takahata, Tomohiro Kakizaki, Masahiko Ishida, Shingo Okamoto, Koji Sakamoto, Kenta Shirasawa, Satoshi Tabata, Takeshi Nishio
Software Mentions: 2
Published: over 10 years ago

10.1186/1471-2229-8-34

Comparative BAC end sequence analysis of tomato and potato reveals overrepresentation of specific gene families in potato
Cited by: 29
Author(s): Erwin Datema, Lukas A. Mueller, Robert Buels, James J. Giovannoni, R.G.F. Visser, Willem J. Stiekema, Roeland C G J van Ham
Software Mentions: 2
Published: over 16 years ago

10.18632/oncotarget.17248

Recombinant SjP40 protein enhances p27 promoter expression in hepatic stellate cells via an E2F1-dependent mechanism
Cited by: 5
Author(s): Yinong Duan, Lei Lyu, Dandan Zhu, Jianxin Wang, Jinling Chen, Liuting Chen, Chuanxin Yang, Xiaolei Sun
Software Mentions: 2
Published: over 7 years ago

10.1371/journal.pone.0008327

An Information Gap in DNA Evidence Interpretation
Cited by: 61
Author(s): Mark W. Perlin, A. A. Sinelnikov
Software Mentions: 1
Published: almost 15 years ago

10.1186/1471-2105-12-344

A novel method to compare protein structures using local descriptors
Cited by: 27
Author(s): Paweł Daniluk, Bogdan Lesyng
Software Mentions: 1
Published: about 13 years ago

10.3390/ma13061344

Grain Growth Behavior of 0.95(Na0.5Bi0.5)TiO3–0.05BaTiO3 Controlled by Grain Shape and Second Phase
Cited by: 3
Author(s): Sang‐Chae Jeon, John G. Fisher, Suk‐Joong L. Kang, Kyoung‐Seok Moon
Software Mentions: 1
Published: over 4 years ago

10.1186/s13015-016-0079-3

An effective sequence-alignment-free superpositioning of pairwise or multiple structures with missing data
Cited by: 3
Author(s): Jianbo Lu, Guoliang Xu, Shihua Zhang, Benzhuo Lu
Software Mentions: 1
Published: about 8 years ago

10.1371/journal.pone.0179628

Skin microbiota in frogs from the Brazilian Atlantic Forest: Species, forest type, and potential against pathogens
Cited by: 14
Author(s): Ananda Brito de Assis, Cristine Chaves Barreto, Carlos A. Navas
Software Mentions: 1
Published: about 7 years ago

10.3390/ijms22084246

Synthesis, Characterization, Antibacterial Properties, and In Vitro Studies of Selenium and Strontium Co-Substituted Hydroxyapatite
Cited by: 13
Author(s): Muhammad Maqbool, Qaisar Nawaz, Muhammad Atiq Ur Rehman, Mark Cresswell, Phil Jackson, Katrin Hurle, Rainer Detsch, Wolfgang H. Goldmann, Asma Tufail Shah
Software Mentions: 1
Published: over 3 years ago