Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: pypi: mat
https://packages.ecosyste.ms/registries/pypi.org/packages/mat
Manage your database versions with pure SQL
3 versions
Latest release: over 4 years ago
1,183 downloads last month
Papers Mentioning mat 30
10.1186/s12938-015-0027-3
Open source software for the analysis of corneal deformation parameters on the images from the Corvis tonometerCited by: 10
Author(s): Robert Koprowski
Software Mentions: 7
Published: over 9 years ago
10.1186/s13321-019-0342-y
KMR: knowledge-oriented medicine representation learning for drug–drug interaction and similarity computationCited by: 16
Author(s): Ying Shen, Kun Yuan, Min Yang, Buzhou Tang, Yaliang Li, Nan Du, Kai Lei
Software Mentions: 7
Published: over 5 years ago
10.12688/wellcomeopenres.16164.2
The effectiveness of social bubbles as part of a Covid-19 lockdown exit strategy, a modelling studyCited by: 28
Author(s): Trystan Leng, Connor White, Joe Hilton, Adam J. Kucharski, Lorenzo Pellis, Helena B. Stage, Nicholas Davies, Matthew James Keeling, Stefan Flasche
Software Mentions: 4
Published: over 3 years ago
10.7554/eLife.64108
Multiple neuronal networks coordinate Hydra mechanosensory behaviorCited by: 14
Author(s): Krishna N. Badhiwala, Abby S Primack, Celina E. Juliano, Jacob T. Robinson
Software Mentions: 3
Published: over 3 years ago
10.1371/journal.pone.0102448
Using Genotyping-By-Sequencing (GBS) for Genomic Discovery in Cultivated OatCited by: 145
Author(s): Yung‐Fen Huang, Jesse Poland, Charlene P. Wight, Eric W. Jackson, Nicholas A. Tinker
Software Mentions: 3
Published: over 10 years ago
10.1118/1.4955438
Technical Note: <scp>spektr</scp> 3.0-A computational tool for x-ray spectrum modeling and analysisCited by: 153
Author(s): Joshua Punnoose, Jennifer Xu, Alejandro Sisniega, Wojciech Zbijewski, Jeffrey H. Siewerdsen
Software Mentions: 3
Published: over 8 years ago
10.3389/fninf.2018.00052
BRANT: A Versatile and Extendable Resting-State fMRI ToolkitCited by: 49
Author(s): Kaibin Xu, Yong Liu, Yafeng Zhan, Jiaji Ren, Tianzi Jiang
Software Mentions: 3
Published: about 6 years ago
10.3389/fnhum.2021.714256
Analysis-rcs-data: Open-Source Toolbox for the Ingestion, Time-Alignment, and Visualization of Sense and Stimulation Data From the Medtronic Summit RC+S SystemCited by: 13
Author(s): Kristin K. Sellers, Ro’ee Gilron, Juan Ansó, Kenneth H Louie, Prasad Shirvalkar, Edward F. Chang, Simon Little, Philip A. Starr
Software Mentions: 3
Published: over 3 years ago
10.1523/ENEURO.0021-18.2018
A Neural Circuit Mechanism for the Involvements of Dopamine in Effort-Related Choices: Decay of Learned Values, Secondary Effects of Depletion, and Calculation of Temporal Difference ErrorCited by: 3
Author(s): Kenji Morita, Ayaka Kato
Software Mentions: 2
Published: almost 7 years ago
10.1186/s13104-015-1122-z
Power of counter movement jumps with external load – coherence of three assessment methodsCited by: 2
Author(s): Marie Hilmersson, Ida Edvardsson, Åsa Tornberg
Software Mentions: 2
Published: over 9 years ago
10.1002/mp.12701
Technical Note: Defining cyclotron‐based clinical scanning proton machines in a FLUKA Monte Carlo systemCited by: 8
Author(s): F. Fiorini, Niek Schreuder, Frank Van den Heuvel
Software Mentions: 2
Published: almost 7 years ago
10.1371/journal.pone.0023063
Larval Transport Modeling of Deep-Sea Invertebrates Can Aid the Search for Undiscovered PopulationsCited by: 28
Author(s): Jonathan M. Yearsley, Julia D. Sigwart
Software Mentions: 2
Published: over 13 years ago
10.1016/j.dib.2020.105618
Chaos game representation dataset of SARS-CoV-2 genomeCited by: 12
Author(s): Raquel de Melo Barbosa, Marcelo A. C. Fernandes
Software Mentions: 2
Published: over 4 years ago
10.3389/fninf.2016.00037
AxonSeg: Open Source Software for Axon and Myelin Segmentation and Morphometric AnalysisCited by: 40
Author(s): Aldo Zaimi, Tanguy Duval, Alicja Gąsecka, Daniel Côté, Nikola Stikov, Julien Cohen‐Adad
Software Mentions: 2
Published: over 8 years ago
10.1038/s41598-018-20062-4
Vital Recorder—a free research tool for automatic recording of high-resolution time-synchronised physiological data from multiple anaesthesia devicesCited by: 116
Author(s): Hyung Chul Lee, Chul-Woo Jung
Software Mentions: 2
Published: almost 7 years ago
10.1016/j.dib.2018.07.069
Graphical user interface for simultaneous profiling of activity patterns in multiple neuronal subclassesCited by: 1
Author(s): R. Ryley Parrish, John P. Grady, Neela K. Codadu, Claudia Racca, Andrew J. Trevelyan
Software Mentions: 1
Published: about 6 years ago
10.1371/journal.pone.0210260
Can Kinect aid motor learning in sportsmen? A study for three standing techniques in judoCited by: 3
Author(s): Cezary Sielużycki, Jarosław Maśliński, Patryk Kaczmarczyk, Rafał Kubacki, Wojciech Cieśliński, Kazimierz Witkowski
Software Mentions: 1
Published: almost 6 years ago
10.3389/fnsys.2020.569337
Epidural Electrical Stimulation of the Lumbosacral Spinal Cord Improves Trunk Stability During Seated Reaching in Two Humans With Severe Thoracic Spinal Cord InjuryCited by: 19
Author(s): Megan L. Gill, Margaux B. Linde, Kalli J. Fautsch, Rena Hale, Cesar Lopez, Daniel D. Veith, Jonathan S. Calvert, Lisa A. Beck, Kristin Garlanger, Reggie Edgerton, Dimitry G. Sayenko, Igor Lavrov, Andrew R. Thoreson, Peter J. Grahn, Kristin D. Zhao
Software Mentions: 1
Published: about 4 years ago
10.1371/journal.pone.0082165
A Quantitative Framework for Flower Phenotyping in Cultivated Carnation (Dianthus caryophyllus L.)Cited by: 10
Author(s): Chacón Borja, Roberto Ballester, Virginia Birlanga, Anne‐Gaëlle Rolland‐Lagan, José Manuel Pérez-Pérez
Software Mentions: 1
Published: almost 11 years ago
10.1038/sdata.2017.52
Multimodal chest surface motion data for respiratory and cardiovascular monitoring applicationsCited by: 6
Author(s): Ghufran Shafiq, Kalyana C. Veluvolu
Software Mentions: 1
Published: over 7 years ago
10.1038/sdata.2018.183
Chemotactic responses of growing neurites to precisely controlled gradients of nerve growth factorCited by: 8
Author(s): Brendan A. Bicknell, Zac Pujic, Julia Feldner, Irina Vetter, Geoffrey J. Goodhill
Software Mentions: 1
Published: about 6 years ago
10.1038/s41597-020-00629-5
A dataset of clinically recorded radar vital signs with synchronised reference sensor signalsCited by: 23
Author(s): Sven Schellenberger, Kilin Shi, Tobias Steigleder, Anke Malessa, Fabian Michler, Laura Hameyer, Nina Neumann, Fabian Lurz, Robert Weigel, Christoph Ostgathe, Alexander Koelpin
Software Mentions: 1
Published: about 4 years ago
10.1038/s41597-021-00995-8
Reference in-vitro dataset for inertial-sensor-to-bone alignment applied to the tibiofemoral jointCited by: 4
Author(s): Ive Weygers, Manon Kok, Thomas Seel, Darshan Shah, Orçun Taylan, Lennart Scheys, Hans Hallez, Kurt Claeys
Software Mentions: 1
Published: over 3 years ago
10.1038/srep41378
Reduced Activity of SRY and its Target Enhancer Sox9-TESCO in a Mouse Species with X*Y Sex ReversalCited by: 11
Author(s): Liang Zhao, Alexander Quinn, Ee Ting Ng, Frédéric Veyrunes, Peter Koopman
Software Mentions: 1
Published: almost 8 years ago
10.1007/s00253-019-09909-6
Metabolism of sucrose in a non-fermentative Escherichia coli under oxygen limitationCited by: 6
Author(s): Karel Olavarría, Albert Fina, Mariana I. Velasco, Mark C.M. van Loosdrecht, Sebastian Aljoscha Wahl
Software Mentions: 1
Published: over 5 years ago
10.1038/s41598-018-28907-8
Dynamics of Plasma Lipidome in Progression to Islet Autoimmunity and Type 1 Diabetes – Type 1 Diabetes Prediction and Prevention Study (DIPP)Cited by: 50
Author(s): Santosh Lamichhane, Linda Ahonen, Thomas Sparholt Dyrlund, Esko Kemppainen, Heli Siljander, Heikki Hyöty, Jorma Ilonen, Jorma Toppari, Riitta Veijola, Tuulia Hyötyläinen, Mikael Knip, Matej Orešič
Software Mentions: 1
Published: over 6 years ago
10.1186/s13029-017-0062-5
Algorithm and software to automatically identify latency and amplitude features of local field potentials recorded in electrophysiological investigationCited by: 2
Author(s): Maria Rubega, Cinzia Cecchetto, Stefano Vassanelli, Giovanni Sparacino
Software Mentions: 1
Published: almost 8 years ago
10.1016/j.ijpx.2019.100028
Industrial application of heat- and mass balance model for fluid-bed granulation for technology transfer and design space explorationCited by: 1
Author(s): David R. Ochsenbein, Matthew Billups, Bingbing Hong, Elisabeth Schäfer, Alexander J. Marchut, Olav Lyngberg
Software Mentions: 1
Published: almost 5 years ago
10.3389/fncel.2020.579349
Improved Separation of Odor Responses in Granule Cells of the Olfactory Bulb During Odor Discrimination LearningCited by: 6
Author(s): Dejuan Wang, Yang Chen, Yi‐Ling Chen, Xiaowen Li, Penglai Liu, Zhaoyang Yin, Anan Li
Software Mentions: 1
Published: about 4 years ago
10.1016/j.dib.2019.104481
Data on full wave-field measurement of transient guided resonance pulses propagating in a composite structureCited by: 0
Author(s): Christophe Droz, Olivier Bareille, Mohamed Ichchou
Software Mentions: 1
Published: about 5 years ago