Projects: pypi: kraken-biom
https://packages.ecosyste.ms/registries/pypi.org/packages/kraken-biom
Create BIOM-format tables from Kraken output.
1 version
Latest release: almost 9 years ago
156 downloads last month
Enhanced Analysis
Educational Contributors:
[email protected]
[email protected]
Repository Activity:
Repository Owner:
Shareef Dabdoub (user)
Asst. Prof. University of Iowa. Division of Biostatistics and Computational Biology. Research focus on microbial ecology, multi-omics, data visualization Academic
Asst. Prof. University of Iowa. Division of Biostatistics and Computational Biology. Research focus on microbial ecology, multi-omics, data visualization Academic
README Analysis:
Science Score: 100/100
Starting Score: 100 points
Bonuses:
-
+40
Educational commit emails
2 contributors with educational email addresses -
+20
Academic repository owner
Repository owned by academic institution
Penalties:
-
-10
PyPI ecosystem
General-purpose ecosystem -
-10
No science terms in description
No scientific terms found in description
Very Likely Science (100)
Papers Mentioning kraken-biom 2
10.3389/fmicb.2020.01536
Low Abundance of Methanotrophs in Sediments of Shallow Boreal Coastal Zones With High Water Methane ConcentrationsCited by: 13
Author(s): Elias Broman, Xiaole Sun, Christian Stranne, Marco Salgado, Stefano Bonaglia, M. C. Geibel, Martin Jakobsson, Alf Norkko, Christoph Humborg, Francisco J. A. Nascimento
Software Mentions: 9
Published: about 5 years ago
10.1038/s42003-020-0822-7
Uncovering diversity and metabolic spectrum of animals in dead zone sedimentsCited by: 16
Author(s): Elias Broman, Stefano Bonaglia, Oleksandr Holovachov, Ugo Marzocchi, Per Hall, Francisco J. A. Nascimento
Software Mentions: 3
Published: over 5 years ago