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Projects: pypi: hgvs

https://packages.ecosyste.ms/registries/pypi.org/packages/hgvs

HGVS Parser, Formatter, Mapper, Validator
73 versions
Latest release: over 3 years ago
5 dependent packages
33,931 downloads last month

Enhanced Analysis
Educational Contributors: alan.rubin@wehi.edu.au clgong@vassar.edu
Repository Activity:
Repository Owner: biocommons (organization)
a collection of open source bioinformatics tools Institutional
README Analysis: DOI Found CITATION.cff
Science Score: 100/100
Starting Score: 100 points
Bonuses:
  • +40 Educational commit emails
    2 contributors with educational email addresses
  • +15 Institutional repository owner
    Repository owned by research institution
  • +6 Science terms in README
    3 scientific terms found in README
  • +30 DOI references
    3 DOI references found in README
  • +15 CITATION.cff file
    Contains citation file for academic attribution
Penalties:
  • -10 PyPI ecosystem
    General-purpose ecosystem
  • -10 No science terms in description
    No scientific terms found in description
Very Likely Science (100)

Papers Mentioning hgvs 3

10.1093/bioinformatics/btu630
A Python package for parsing, validating, mapping and formatting sequence variants using HGVS nomenclature
Cited by: 32
Author(s): Reece K. Hart, Rudolph Rico, Emily E. Hare, John Garcia, Jody Westbrook, Vincent A. Fusaro
Software Mentions: 2
Published: almost 12 years ago
10.1002/humu.23348
VariantValidator: Accurate validation, mapping, and formatting of sequence variation descriptions
Cited by: 92
Author(s): Peter Freeman, Reece K. Hart, Liam J. Gretton, Anthony J. Brookes, Raymond Dalgleish
Software Mentions: 1
Published: over 8 years ago
10.1002/humu.23615
hgvs: A Python package for manipulating sequence variants using HGVS nomenclature: 2018 Update
Cited by: 14
Author(s): Meng Wang, Keith M. Callenberg, Raymond Dalgleish, Alexandre Fedtsov, Naomi Fox, Peter Freeman, Kevin B. Jacobs, Piotr Kaleta, Andrew McMurry, Andreas Prlić, Veena Rajaraman, Reece K. Hart
Software Mentions: 1
Published: almost 8 years ago