Projects: pypi: hapROH
https://packages.ecosyste.ms/registries/pypi.org/packages/hapROH
Identify runs of homozygosity (hapROH) and contamination (hapCon) in low coverage ancient human DNA data (1240K SNPs) using modern reference panel
27 versions
Latest release: about 3 years ago
62 downloads last month
Enhanced Analysis
Educational Contributors:
hringbauer@uchicago.edu
yh362@cornell.edu
harald_ringbauer@hms.harvard.edu
steinrue@uchicago.edu
hringbauer@ist.ac.at
hr97@login04.o2.rc.hms.harvard.edu
Repository Activity:
Repository Owner:
Harald Ringbauer (user)
Creating methods in computational population genetics. Focus on ancient DNA analysis. Group Leader @ Max Planck Institute, Archaeogenetics Department, Leipzig Academic
Creating methods in computational population genetics. Focus on ancient DNA analysis. Group Leader @ Max Planck Institute, Archaeogenetics Department, Leipzig Academic
README Analysis:
DOI Found
Science Score: 100/100
Starting Score: 100 points
Bonuses:
-
+120
Educational commit emails
6 contributors with educational email addresses -
+20
Academic repository owner
Repository owned by academic institution -
+2
Science terms in README
1 scientific terms found in README -
+10
DOI references
1 DOI references found in README -
+6
Academic links
1 academic links found in README
Penalties:
-
-10
PyPI ecosystem
General-purpose ecosystem -
-10
No science terms in description
No scientific terms found in description
Very Likely Science (100)
Papers Mentioning hapROH 1
10.1371/journal.pone.0247332
Genome-wide analysis of nearly all the victims of a 6200 year old massacreCited by: 8
Author(s): Mario Novak, Ïñigo Olalde, Harald Ringbauer, Nadin Rohland, James C. M. Ahern, Jacqueline Balen, Ivor Janković, Hrvoje Potrebica, Ron Pinhasi, David Reich
Software Mentions: 1
Published: about 5 years ago