Projects: pypi: gtdbtk
https://packages.ecosyste.ms/registries/pypi.org/packages/gtdbtk
A toolkit for assigning objective taxonomic classifications to bacterial and archaeal genomes.
47 versions
Latest release: about 3 years ago
226 downloads last month
Enhanced Analysis
Educational Contributors:
uqpchaum@uq.edu.au
danielmcdonald@ucsd.edu
Repository Activity:
Repository Owner:
Australian Centre for Ecogenomics (organization)
Academic
README Analysis:
DOI Found
Science Score: 100/100
Starting Score: 100 points
Bonuses:
-
+40
Educational commit emails
2 contributors with educational email addresses -
+20
Academic repository owner
Repository owned by academic institution -
+15
Institutional repository owner
Repository owned by research institution -
+16
Science terms in README
8 scientific terms found in README -
+40
DOI references
4 DOI references found in README -
+12
Academic links
2 academic links found in README
Penalties:
-
-10
PyPI ecosystem
General-purpose ecosystem -
-10
No science terms in description
No scientific terms found in description
Very Likely Science (100)
Papers Mentioning gtdbtk 3
10.3389/fmicb.2020.597686
Wenzhouxiangella Strain AB-CW3, a Proteolytic Bacterium From Hypersaline Soda Lakes That Preys on Cells of Gram-Positive BacteriaCited by: 12
Author(s): Dimitry Y. Sorokin, Damon Mosier, Jackie Zorz, Xiaoli Dong, Marc Strous
Software Mentions: 2
Published: over 5 years ago
10.3389/fmicb.2019.02563
Enrichment of Marinobacter sp. and Halophilic Homoacetogens at the Biocathode of Microbial Electrosynthesis System Inoculated With Red Sea Brine PoolCited by: 23
Author(s): Manal Alqahtani, Suman Bajracharya, Krishna P. Katuri, Muhammad Ali, Ala’a Ragab, Grégoire Michoud, Daniele Daffonchio, Pascal E. Saikaly
Software Mentions: 1
Published: over 6 years ago
10.1128/mSphere.00943-20
Amylases in the Human VaginaCited by: 24
Author(s): Kenetta L. Nunn, Gérémy Clair, Joshua N. Adkins, Kristin Engbrecht, Thomas Fillmore, Larry J. Forney
Software Mentions: 1
Published: over 5 years ago