pypi: glmnet | Projects | Ecosyste.ms: Papers

10.3389/fnins.2016.00344

Bootstrap Enhanced Penalized Regression for Variable Selection with Neuroimaging Data
Cited by: 34
Author(s): Samantha V. Abram, Nathaniel E. Helwig, Craig Moodie, Colin G. DeYoung, Angus W. MacDonald, Niels G. Waller
Software Mentions: 2
Published: over 8 years ago

10.3389/fnins.2017.00646

Local Fields in Human Subthalamic Nucleus Track the Lead-up to Impulsive Choices
Cited by: 12
Author(s): J. M. Pearson, Patrick Hickey, Shivanand P. Lad, Michael L. Platt, Dennis A. Turner
Software Mentions: 2
Published: almost 7 years ago

10.3389/fnins.2012.00115

Discovery and replication of gene influences on brain structure using LASSO regression
Cited by: 89
Author(s): Omid Kohannim
Software Mentions: 2
Published: almost 13 years ago

10.3389/fnins.2018.01045

Dual-Model Radiomic Biomarkers Predict Development of Mild Cognitive Impairment Progression to Alzheimer’s Disease
Cited by: 39
Author(s): Hucheng Zhou, Jiehui Jiang, Jiaying Lu, Min Wang, Huiwei Zhang, Chuantao Zuo, Alzheimer’s Disease Neuroimaging Initiative
Software Mentions: 2
Published: almost 6 years ago

10.3390/biology10050375

Identification of an 11-Autophagy-Related-Gene Signature as Promising Prognostic Biomarker for Bladder Cancer Patients
Cited by: 6
Author(s): Chunhui Zhou, Alex Heng Li, Shan Liu, Hong Sun
Software Mentions: 2
Published: over 3 years ago

10.18632/oncotarget.19799

Advanced nasopharyngeal carcinoma: pre-treatment prediction of progression based on multi-parametric MRI radiomics
Cited by: 53
Author(s): Bin Zhang, Fusheng Ouyang, Dongsheng Gu, Yang Dong, Lu Zhang, Xiaokai Mo, Wenhui Huang, Shuixing Zhang
Software Mentions: 2
Published: over 7 years ago

10.1186/s13040-018-0162-z

Identification of influential observations in high-dimensional cancer survival data through the rank product test
Cited by: 10
Author(s): Eunice Carrasquinha, André Veríssimo, Marta B. Lopes, Susana Vinga
Software Mentions: 2
Published: almost 7 years ago

10.1186/s13040-017-0159-z

Sparse generalized linear model with L 0 approximation for feature selection and prediction with big omics data
Cited by: 11
Author(s): Zhenqiu Liu, Fengzhu Sun, Dermot P. McGovern
Software Mentions: 2
Published: almost 7 years ago

10.1136/bmjopen-2020-045780

Changes of perceptions and behaviours during the phases of COVID-19 pandemic in German elderly people with neurological disorders: an observational study using telephone interviews
Cited by: 3
Author(s): Hannah M. Zipprich, Aline Schönenberg, Ulrike Teschner, Tino Prell
Software Mentions: 2
Published: almost 4 years ago

10.1186/s12917-020-02352-0

MRI perfusion analysis using freeware, standard imaging software
Cited by: 1
Author(s): Antje Hartmann, Volkher B. Scholz, Ines E. Lautenschläger
Software Mentions: 2
Published: over 4 years ago

10.18632/oncotarget.20423

Exploration and validation of radiomics signature as an independent prognostic biomarker in stage III-IVb nasopharyngeal carcinoma
Cited by: 34
Author(s): Fusheng Ouyang, Bin Guo, Bin Zhang, Yang Dong, Lu Zhang, Xiaokai Mo, Wenhui Huang, Shuixing Zhang, Qiugen Hu
Software Mentions: 2
Published: about 7 years ago

10.1186/1752-0509-8-S1-S6

Identifying disease associated genes by network propagation
Cited by: 26
Author(s): Yu Qian, Søren Besenbacher, Thomas Mailund, Mikkel H. Schierup
Software Mentions: 2
Published: almost 11 years ago

10.1186/s12918-016-0260-9

Integrative modeling of multi-omics data to identify cancer drivers and infer patient-specific gene activity
Cited by: 23
Author(s): Ana B. Pavel, Dmitriy Sonkin, Anupama Reddy
Software Mentions: 2
Published: almost 9 years ago

10.3389/fonc.2020.00028

Radiomics Signature as a Predictive Factor for EGFR Mutations in Advanced Lung Adenocarcinoma
Cited by: 50
Author(s): Daojun Hong, Ke Xu, Lina Zhang, Xiaoting Wan, Yan Guo
Software Mentions: 2
Published: almost 5 years ago

10.1186/s12890-019-0782-1

Development and validation of a simple-to-use clinical nomogram for predicting obstructive sleep apnea
Cited by: 30
Author(s): Huajun Xu, Xiaolong Zhao, Yue Shi, Xinyi Li, Yingjun Qian, Jian Zou, Hongliang Yi, Huizhen Huang, Jian Guan, Shankai Yin
Software Mentions: 2
Published: almost 6 years ago

10.1186/s12889-016-3239-y

Factors associated with performing tuberculosis screening of HIV-positive patients in Ghana: LASSO-based predictor selection in a large public health data set
Cited by: 28
Author(s): Susanne Mueller‐Using, Torsten Feldt, Fred Stephen Sarfo, Kirsten Alexandra Eberhardt
Software Mentions: 2
Published: over 8 years ago

10.3389/fonc.2021.628982

Prognostic Value of Pre-Treatment CT Radiomics and Clinical Factors for the Overall Survival of Advanced (IIIB–IV) Lung Adenocarcinoma Patients
Cited by: 9
Author(s): Daojun Hong, Lina Zhang, Ke Xu, Xiaoting Wan, Yan Guo
Software Mentions: 2
Published: over 3 years ago

10.3389/fonc.2018.00296

Prostate-Specific Antigen Trends Predict the Probability of Prostate Cancer in a Very Large U.S. Veterans Affairs Cohort
Cited by: 5
Author(s): R. Jeffrey Karnes, F. Roy MacKintosh, Christopher H. Morrell, Lori Rawson, Preston Sprenkle, Michael W. Kattan, Michele Colicchia, Thomas Neville
Software Mentions: 2
Published: over 6 years ago

10.1186/1753-6561-5-S9-S24

LASSO model selection with post-processing for a genome-wide association study data set
Cited by: 6
Author(s): Allan Motyer, Chris McKendry, Sally Galbraith, Susan R. Wilson
Software Mentions: 2
Published: almost 13 years ago

10.1186/1753-6561-5-S9-S113

Comparison of statistical approaches to rare variant analysis for quantitative traits
Cited by: 9
Author(s): Han Chen, Audrey E. Hendricks, Yansong Cheng, L. Adrienne Cupples, Josée Dupuis, Ching‐Ti Liu
Software Mentions: 2
Published: almost 13 years ago

10.1186/1753-6561-5-S9-S69

Using LASSO regression to detect predictive aggregate effects in genetic studies
Cited by: 14
Author(s): Joel Fontanarosa, Yang Dai
Software Mentions: 2
Published: almost 13 years ago

10.1186/1753-6561-6-S2-S10

Genomic selection using regularized linear regression models: ridge regression, lasso, elastic net and their extensions
Cited by: 228
Author(s): Joseph O. Ogutu, Torben Schulz-Streeck, Hans‐Peter Piepho
Software Mentions: 2
Published: over 12 years ago

10.3389/fonc.2021.708784

An Immune-Clinical Prognostic Index (ICPI) for Patients With De Novo Follicular Lymphoma Treated With R-CHOP/CHOP Chemotherapy
Cited by: 3
Author(s): Yaxiao Lu, Jingwei Yu, Wenchen Gong, Liping Su, Xiuhua Sun, Ou Bai, Hui Zhou, Xue Guan, Tingting Zhang, Lanfang Li, Lihua Qiu, Qian Zheng, Shunhua Zhou, Bin Meng, Xiubao Ren, Linyu Li, Huilai Zhang
Software Mentions: 2
Published: over 3 years ago

10.1186/s12883-021-02226-4

Accelerating diagnosis of Parkinson’s disease through risk prediction
Cited by: 13
Author(s): William Yuan, Brett K. Beaulieu‐Jones, Richard C. Krolewski, Nathan Palmer, Christine Veyrat‐Follet, Francesca Frau, Caroline Cohen, Sylvie Bozzi, Meaghan Cogswell, Dinesh Kumar, Catherine Coulouvrat, Bruno Leroy, Tanya Fischer, S. Pablo Sardi, Karen J. Chandross, Lee L. Rubin, Anne‐Marie Wills, Isaac S. Kohane, Scott Lipnick
Software Mentions: 2
Published: over 3 years ago

10.18632/oncotarget.22885

Quantitative metabolomics for investigating the value of polyamines in the early diagnosis and therapy of colorectal cancer
Cited by: 15
Author(s): Ran Liu, Xiaohui Lin, Zuojing Li, Qing Li, Kaishun Bi
Software Mentions: 2
Published: almost 7 years ago

10.3389/fonc.2020.551255

A New Model for Predicting Hypothyroidism After Intensity-Modulated Radiotherapy for Nasopharyngeal Carcinoma
Cited by: 10
Author(s): Liang Peng, Yan‐Ping Mao, Cheng‐Long Huang, Rui Guo, Jun Ma, Wen Wang, Ling-Long Tang
Software Mentions: 2
Published: about 4 years ago

10.1186/s12874-021-01297-8

Classification of PR-positive and PR-negative subtypes in ER-positive and HER2-negative breast cancers based on pathway scores
Cited by: 7
Author(s): Taobo Hu, Yan Chen, Yiqiang Liu, Danhua Zhang, Jiankang Pan, Mengping Long
Software Mentions: 2
Published: over 3 years ago

10.1186/s12874-019-0848-z

A comparison of machine learning techniques for classification of HIV patients with antiretroviral therapy-induced mitochondrial toxicity from those without mitochondrial toxicity
Cited by: 11
Author(s): Jong Soo Lee, Elijah Paintsil, Vivek Gopalakrishnan, Musie Ghebremichael
Software Mentions: 2
Published: almost 5 years ago

10.1186/s12874-020-01058-z

Directed acyclic graphs and causal thinking in clinical risk prediction modeling
Cited by: 40
Author(s): Marco Piccininni, Stefan Konigorski, Jessica L. Rohmann, Tobias Kurth
Software Mentions: 2
Published: over 4 years ago

10.18632/oncotarget.24337

Proteomic analysis defines kinase taxonomies specific for subtypes of breast cancer
Cited by: 21
Author(s): Kyla A.L. Collins, Timothy J. Stuhlmiller, Jon S. Zawistowski, Michael P. East, Thuy Thi Thu Pham, Claire R. Hall, Daniel R. Goulet, Samantha M. Bevill, Steven P. Angus, Sara H. Velarde, Noah Sciaky, Tudor I. Oprea, Lee M. Graves, Gary L. Johnson, Shawn M. Gomez
Software Mentions: 2
Published: almost 7 years ago

10.3389/fonc.2020.01416

Radiomics Nomogram for Prediction of Peritoneal Metastasis in Patients With Gastric Cancer
Cited by: 19
Author(s): Weicai Huang, Kangneng Zhou, Yuming Jiang, Chuanli Chen, Qingyu Yuan, Zhen Han, Jingjing Xie, Shitong Yu, Zhiwei Sun, Yanfeng Hu, Jiang Yu, Hao Liu, Ruoxiu Xiao, Yu Xu, Zhiwei Zhou, Guoxin Li
Software Mentions: 2
Published: over 4 years ago

10.3389/fonc.2021.652040

Development of a tRNA-Derived Small RNA Prognostic Panel and Their Potential Functions in Osteosarcoma
Cited by: 1
Author(s): Zhenming Tang, Shuhui Zhang, Zhougui Ling
Software Mentions: 2
Published: over 3 years ago

10.1186/s12920-018-0451-x

A robust fuzzy rule based integrative feature selection strategy for gene expression data in TCGA
Cited by: 4
Author(s): Shicai Fan, Jie Tang, Qi Tian, Chunguo Wu
Software Mentions: 2
Published: almost 6 years ago

10.1186/s12920-020-0706-1

Identification of miRNA-mRNA associations in hepatocellular carcinoma using hierarchical integrative model
Cited by: 6
Author(s): Rency S. Varghese, Yuan Zhou, Megan E. Barefoot, Yifan Chen, Cristina Di Poto, Abdalla Kara Balla, Everett Oliver, Zaki A. Sherif, Deepak Kumar, Alexander Kroemer, Mahlet G. Tadesse, Habtom W. Ressom
Software Mentions: 2
Published: over 4 years ago

10.1186/1755-8794-5-10

DNA methylation differences at growth related genes correlate with birth weight: a molecular signature linked to developmental origins of adult disease?
Cited by: 85
Author(s): Nahid Turan, Mohamed Ghalwash, Sunita Katari, Christos Coutifaris, Zoran Obradović, Carmen Sapienza
Software Mentions: 2
Published: over 12 years ago

10.3389/fonc.2021.666826

Integrated Analysis of Cell Cycle–Related and Immunity-Related Biomarker Signatures to Improve the Prognosis Prediction of Lung Adenocarcinoma
Cited by: 14
Author(s): Fangyu Chen, Jiahang Song, Ziqi Ye, Bing Xu, Hongyan Cheng, Shu Zhang, Xinchen Sun
Software Mentions: 2
Published: over 3 years ago

10.1186/s12879-021-06510-z

Evaluation of the added value of viral genomic information for predicting severity of influenza infection
Cited by: 3
Author(s): Nina Van Goethem, Annie Robert, Nathalie Bossuyt, Laura A. E. Van Poelvoorde, Sophie Quoilin, Sigrid C. J. De Keersmaecker, Brecht Devleesschauwer, Isabelle Thomas, Kevin Vanneste, Nancy Roosens, Herman Van Oyen
Software Mentions: 2
Published: over 3 years ago

10.1186/1471-2164-13-452

Comparison of whole-genome prediction models for traits with contrasting genetic architecture in a diversity panel of maize inbred lines
Cited by: 75
Author(s): Christian Riedelsheimer, Frank Technow, Albrecht E. Melchinger
Software Mentions: 2
Published: about 12 years ago

10.3389/fonc.2020.598253

Development and Validation of a Radiomic-Based Model for Prediction of Intrahepatic Cholangiocarcinoma in Patients With Intrahepatic Lithiasis Complicated by Imagologically Diagnosed Mass
Cited by: 11
Author(s): Beihui Xue, Sunjie Wu, Ming‐Hua Zheng, Huanchang Jiang, Jun Chen, Zhaoqiang Jiang, Tian Tian, Yifan Tu, Hongxin Zhao, Xian Shen, Kuvaneshan Ramen, Ximei Wu, Qiyu Zhang, Qian Zeng, Xiujuan Zheng
Software Mentions: 2
Published: almost 4 years ago

10.3389/fped.2021.670382

Stress and Metabolomics for Prediction of Spontaneous Preterm Birth: A Prospective Nested Case-Control Study in a Tertiary Hospital
Cited by: 3
Author(s): Dongni Huang, Zheng Liu, Xiyao Liu, Yuxiang Bai, Mengshi Wu, Xin Luo, Hongbo Qi
Software Mentions: 2
Published: about 3 years ago

10.1186/s12864-018-4527-y

Predictors of breast cancer cell types and their prognostic power in breast cancer patients
Cited by: 14
Author(s): Fan Wang, Zachariah Dohogne, Yu Liu, Benjamin Soibam
Software Mentions: 2
Published: almost 7 years ago

10.1186/s12864-020-6676-z

Dissection of the mutation accumulation process during bacterial range expansions
Cited by: 6
Author(s): Lars Bosshard, Stephan Peischl, Martin Ackermann, Laurent Excoffier
Software Mentions: 2
Published: over 4 years ago

10.3389/fphys.2020.00065

Identification of Serum-Based Metabolic Feature and Characteristic Metabolites in Paraquat Intoxicated Mouse Models
Cited by: 9
Author(s): Youjia Yu, Zishan Gao, Jiaqian Lou, Zhengsheng Mao, Kai Li, Chunyan Chu, Li Hu, Zheng Li, Chuwei Deng, Han-Ting Fan, Peng Chen, Huijie Huang, Yizhen Yu, Jingjing Ding, Ding Li
Software Mentions: 2
Published: almost 5 years ago

10.1186/s12864-016-3001-y

AID/APOBEC-network reconstruction identifies pathways associated with survival in ovarian cancer
Cited by: 15
Author(s): Martin Svoboda, Anastasia Meshcheryakova, Georg Heinze, Markus Jaritz, Dietmar Pils, Dan Cacsire Castillo‐Tong, G. Hager, Theresia Thalhammer, Erika Jensen‐Jarolim, Peter Birner, Elena Ioana Braicu, Jalid Sehouli, Sandrina Lambrechts, Ignace Vergote, Sven Mahner, Philip Zimmermann, Robert Zeillinger
Software Mentions: 2
Published: over 8 years ago

10.1186/s12864-018-5153-4

Paternal germ line aging: DNA methylation age prediction from human sperm
Cited by: 60
Author(s): Timothy G. Jenkins, Kenneth I. Aston, Bradley R. Cairns, Andrew D. Smith, Douglas T. Carrell
Software Mentions: 2
Published: about 6 years ago

10.3389/fpls.2019.01482

Genotype Specific Photosynthesis x Environment Interactions Captured by Automated Fluorescence Canopy Scans Over Two Fluctuating Growing Seasons
Cited by: 19
Author(s): Beat Keller, Shizue Matsubara, Uwe Rascher, Roland Pieruschka, Angelina Steier, Thorsten Kraska, Onno Muller
Software Mentions: 2
Published: about 5 years ago

10.3389/fpsyt.2018.00084

Comorbid Diagnosis of Psychotic Disorders in Borderline Personality Disorder: Prevalence and Influence on Outcome
Cited by: 23
Author(s): Christina W. Slotema, Jan Dirk Blom, Marieke B. A. Niemantsverdriet, Mathijs Deen, Iris Sommer
Software Mentions: 2
Published: over 6 years ago

10.3389/fpsyt.2021.707581

Identification of Major Psychiatric Disorders From Resting-State Electroencephalography Using a Machine Learning Approach
Cited by: 14
Author(s): Su Mi Park, Boram Jeong, Da Young Oh, Chong‐Ho Choi, Hee Yeon Jung, Jun Young Lee, Donghwan Lee, Jung Seok Choi
Software Mentions: 2
Published: over 3 years ago

10.3389/fpsyg.2021.594462

Predicting Uncertain Multi-Dimensional Adulthood Outcomes From Childhood and Adolescent Data in People Referred to Autism Services
Cited by: 4
Author(s): Gordon Forbes, Catherine Lord, Rebecca Elias, Andrew Pickles
Software Mentions: 2
Published: almost 4 years ago

10.3389/fpsyg.2018.02060

Predictors of Executive Functions in Preschoolers: Findings From the SPLASHY Study
Cited by: 20
Author(s): Annina Zysset, Tanja H. Kakebeeke, Nadine Messerli‐Bürgy, Andrea Meyer, Kerstin Stülb, Claudia S. Leeger‐Aschmann, Einat A. Schmutz, Amar Arhab, Jardena J. Puder, Susi Kriemler, Simone Munsch, Oskar G. Jenni
Software Mentions: 2
Published: about 6 years ago

10.3389/fnsys.2016.00025

A Probabilistic Approach to Receptive Field Mapping in the Frontal Eye Fields
Cited by: 6
Author(s): J. Patrick Mayo, Randall L. Morrison, Matthew A. Smith
Software Mentions: 2
Published: over 8 years ago

10.3389/fvets.2020.575795

Development of an Early Warning System for Owners Using a Validated Health-Related Quality of Life (HRQL) Instrument for Companion Animals and Its Use in a Large Cohort of Dogs
Cited by: 4
Author(s): Vinny Davies, Eileen Scott, M. Lesley Wiseman-Orr, Andrea Wright, J. Reid
Software Mentions: 2
Published: about 4 years ago

10.1186/1471-2164-15-S10-S2

Improving miRNA-mRNA interaction predictions
Cited by: 25
Author(s): Daniel Tabas-Madrid, Ander Muniategui, Ignacio Sánchez-Caballero, Dannys Jorge Martínez-Herrera, Carlos Óscar S. Sorzano, Ángel Rubio, Alberto Pascual-Montano
Software Mentions: 2
Published: almost 10 years ago

10.3390/genes10060464

Integrative Analysis of Genomic and Clinical Data Reveals Intrinsic Characteristics of Bladder Urothelial Carcinoma Progression
Cited by: 7
Author(s): Bin Zhou, Rui Guo
Software Mentions: 2
Published: over 5 years ago

10.1186/1471-2156-14-5

Empirical Bayesian LASSO-logistic regression for multiple binary trait locus mapping
Cited by: 21
Author(s): Anhui Huang, Shizhong Xu, Xiaodong Cai
Software Mentions: 2
Published: almost 12 years ago

10.1002/gepi.21639

Reprioritizing Genetic Associations in Hit Regions Using LASSO‐Based Resample Model Averaging
Cited by: 24
Author(s): William Valdar, Jeremy A. Sabourin, Andrew B. Nobel, Connor Holmes
Software Mentions: 2
Published: over 12 years ago

10.1186/gb-2014-15-1-r9

Identification of distinct miRNA target regulation between breast cancer molecular subtypes using AGO2-PAR-CLIP and patient datasets
Cited by: 62
Author(s): Thalia A. Farazi, Jelle J. ten Hoeve, Miguel Brown, Aleksandra Mihailović, Hugo M. Horlings, Marc J. van de Vijver, Thomas Tuschl, Lodewyk Wessels
Software Mentions: 2
Published: almost 11 years ago

10.1186/s12876-021-01638-3

Development of a novel lipid metabolism-based risk score model in hepatocellular carcinoma patients
Cited by: 10
Author(s): Wenjie Wang, Chen Zhang, Qihong Yu, Xiaojiao Zheng, Chuanzheng Yin, Xueke Yan, Gang Liu, Zifang Song
Software Mentions: 2
Published: almost 4 years ago

10.1186/s12872-020-01634-7

Platelet counts are associated with arterial stiffness in Chinese Han population: a longitudinal study
Cited by: 4
Author(s): Kuo Li, Junfeng Xu, Lixin Tao, Kun Yang, Yang Sun, Xiuhua Guo
Software Mentions: 2
Published: over 4 years ago

10.3390/jpm11010008

Preoperative Predicting the WHO/ISUP Nuclear Grade of Clear Cell Renal Cell Carcinoma by Computed Tomography-Based Radiomics Features
Cited by: 9
Author(s): Claudia-Gabriela Moldovanu, Bianca Boca, Andrei Lebovici, Attila Tamas-Szora, Diana Feier, Nicolae Crişan, Iulia Andraș, Mircea Buruian
Software Mentions: 2
Published: almost 4 years ago

10.5808/GI.2019.17.4.e47

Pure additive contribution of genetic variants to a risk prediction model using propensity score matching: application to type 2 diabetes
Cited by: 1
Author(s): Chanwoo Park, Nan Jiang, Taesung Park
Software Mentions: 2
Published: almost 5 years ago

10.1016/j.gpb.2019.09.002

Identification of Cognitive Dysfunction in Patients with T2DM Using Whole Brain Functional Connectivity
Cited by: 10
Author(s): Zhenyu Liu, Jiangang Liu, Huijuan Yuan, Taiyuan Liu, Xingwei Cui, Zhenchao Tang, Yang Du, Meiyun Wang, Yusong Lin, Jie Tian
Software Mentions: 2
Published: over 5 years ago

10.1186/s40352-015-0022-6

Health-related factors predict return to custody in a large cohort of ex-prisoners: new approaches to predicting re-incarceration
Cited by: 22
Author(s): Emma F. Thomas, Matthew J Spittal, Faye S. Taxman, Stuart A Kinner
Software Mentions: 2
Published: over 9 years ago

10.3390/healthcare9070887

Accreditation and Certification: Do They Improve Hospital Financial and Quality Performance?
Cited by: 2
Author(s): Matthew Brooks, Brad Beauvais, Clemens Scott Kruse, Lawrence V. Fulton, Michael Mileski, Zo Ramamonjiarivelo, Ramalingam Shanmugam, Cristian Lieneck
Software Mentions: 2
Published: over 3 years ago

10.1021/acsomega.1c02223

New Formula for the Hydrogen-Bonding Hansen Component of Methanol, Ethanol, and <i>n</i>-Propanol for Non-ambient Conditions—Application in Gas Antisolvent Fractionation-Based Optical Resolution
Cited by: 3
Author(s): Máté Mihalovits, Márton Kőrösi, Edit Székely
Software Mentions: 2
Published: over 3 years ago

10.1002/iid3.133

Whole genome prediction and heritability of childhood asthma phenotypes
Cited by: 2
Author(s): Michael J. McGeachie, George L. Clemmer, Damien C. Croteau‐Chonka, Peter J. Castaldi, Michael H. Cho, Joanne E. Sordillo, Jessica Lasky‐Su, Benjamin A. Raby, Kelan G. Tantisira, Scott T. Weiss
Software Mentions: 2
Published: almost 8 years ago

10.1002/iid3.363

A signature of 18 immune‐related gene pairs to predict the prognosis of pancreatic cancer patients
Cited by: 5
Author(s): Fanqin Bu, Han Nie, Xiaojian Zhu, Ting Wu, Lin Kang, Jiefeng Zhao, Jun Huang
Software Mentions: 2
Published: about 4 years ago

10.1002/iid3.421

Construction and validation of a machine learning‐based nomogram: A tool to predict the risk of getting severe coronavirus disease 2019 (COVID‐19)
Cited by: 11
Author(s): Zhixian Yao, Xinyi Zheng, Zheng Zhong, Ke Wu, Junhua Zheng
Software Mentions: 2
Published: over 3 years ago

10.1111/irv.12622

Serological response to influenza vaccination among adults hospitalized with community-acquired pneumonia
Cited by: 2
Author(s): Caroline Quinn Pratt, Yuwei Zhu, Carlos G. Grijalva, Richard G. Wunderink, D. Mark Courtney, Grant Waterer, Min Z. Levine, Stacie Jefferson, Wesley H. Self, Derek J. Williams, L. Finelli, Anna M. Bramley, Kathryn M. Edwards, Seema Jain, Evan J. Anderson
Software Mentions: 2
Published: almost 6 years ago

10.1186/s12885-020-07688-2

A genomic-clinicopathologic nomogram for predicting overall survival of hepatocellular carcinoma
Cited by: 4
Author(s): Kena Zhou, Qiang Zhou, Congbo Cai
Software Mentions: 2
Published: almost 4 years ago

10.1001/jamanetworkopen.2020.11768

Development of a Machine Learning Model for Survival Risk Stratification of Patients With Advanced Oral Cancer
Cited by: 38
Author(s): Yi-Ju Tseng, Hsin-Yao Wang, Ting Wei Lin, Jang Jih Lu, Chia Hsun Hsieh, Chun Ta Liao
Software Mentions: 2
Published: over 4 years ago

10.1001/jamanetworkopen.2021.16853

Assessment of Somatosensory Function and Self-harm in Adolescents
Cited by: 8
Author(s): Tatum M. Cummins, Oliver English, Helen Minnis, Daniel Ståhl, Rory C. O’Connor, Kirsty Bannister, Stephen B. McMahon, Dennis Ougrin
Software Mentions: 2
Published: over 3 years ago

10.1093/jamiaopen/ooz040

Using natural language processing to construct a metastatic breast cancer cohort from linked cancer registry and electronic medical records data
Cited by: 32
Author(s): Albee Y. Ling, Allison W. Kurian, Jennifer L. Caswell-Jin, George W. Sledge, Nigam H. Shah, Suzanne Tamang
Software Mentions: 2
Published: about 5 years ago

10.3390/nu12092652

Logistic LASSO Regression for Dietary Intakes and Breast Cancer
Cited by: 138
Author(s): Archana Jaiswal McEligot, Valerie Poynor, Rishabh Sharma, Anand Panangadan
Software Mentions: 2
Published: about 4 years ago

10.1371/journal.pone.0065380

Effects of Sample Size on Differential Gene Expression, Rank Order and Prediction Accuracy of a Gene Signature
Cited by: 46
Author(s): Cynthia Stretch, Sumsullah Khan, Nasimeh Asgarian, Roman Eisner, Saman Vaisipour, Sambasivarao Damaraju, Kathryn Graham, Oliver F. Bathe, Helen Steed, Russell Greiner, Vickie E. Baracos
Software Mentions: 2
Published: over 11 years ago

10.1200/PO.20.00086

Protein Signature Predicts Response to Neoadjuvant Treatment With Chemotherapy and Bevacizumab in HER2-Negative Breast Cancers
Cited by: 4
Author(s): Mads H. Haugen, Ole Christian Lingjærde, Ingrid Hedenfalk, Øystein Garred, Elin Borgen, Niklas Loman, Thomas Hatschek, Anne Lise Børresen-Dale, Bjørn Naume, Gordon B. Mills, Gunhild M. Mælandsmo, Olav Engebraaten
Software Mentions: 2
Published: almost 4 years ago

10.1200/PO.21.00103

Making External Validation Valid for Molecular Classifier Development
Cited by: 1
Author(s): Yilin Wu, Hsin‐Chieh Huang, Li‐Xuan Qin
Software Mentions: 2
Published: about 3 years ago

10.1093/jamia/ocz004

Quantifying risk factors in medical reports with a context-aware linear model
Cited by: 3
Author(s): Piotr Przybyła, Austin J. Brockmeier, Sophia Ananiadou
Software Mentions: 2
Published: over 5 years ago

10.1186/s12885-020-07017-7

The development and validation of a radiomic nomogram for the preoperative prediction of lung adenocarcinoma
Cited by: 7
Author(s): Qin Liu, Yan Huang, Huai Chen, Yanwen Liu, Ruihong Liang, Qing Zeng
Software Mentions: 2
Published: over 4 years ago

10.7150/jca.37708

Precise prediction of the radiation pneumonitis in lung cancer: an explorative preliminary mathematical model using genotype information
Cited by: 5
Author(s): Le Du, Ning Ma, X. Dai, Yu Wang, Xiang Huang, Shouping Xu, Fang Liu, Qiduo He, Yanli Li, Qian Wang, Xiangtao Liu, Hui Zheng, Baolin Qu
Software Mentions: 2
Published: almost 5 years ago

10.7150/jca.46386

Multiomics profile and prognostic gene signature of m6A regulators in uterine corpus endometrial carcinoma
Cited by: 23
Author(s): Yizi Wang, Fang Ren, Zixuan Song, Xiaoying Wang, Xiaoxin Ma
Software Mentions: 2
Published: almost 5 years ago

10.7150/jca.46093

Prognostic impact of tumor budding and EMT in periampullary adenocarcinoma: a quantitative approach
Cited by: 6
Author(s): Éva Kocsmár, Gábor Lotz, András Kiss, Michaela Hoerner, Ekaterina Petrova, Nikolaus Freudenberg, Ágnes Csanádi, Birte Kulemann, Martin Werner, Peter Bronsert, Ulrich F. Wellner
Software Mentions: 2
Published: almost 5 years ago

10.1186/s12885-021-08523-y

Development and validation of a clinical prediction model for endocervical curettage decision-making in cervical lesions
Cited by: 4
Author(s): Yuanxing Li, Haiwei Luo, Xiu Zhang, Jianmei Chang, Yueyang Zhao, Jing Li, Dongyan Li, Wei Wang
Software Mentions: 2
Published: over 3 years ago

10.1111/jcmm.15536

Large‐scale transcriptome profiles reveal robust 20‐signatures metabolic prediction models and novel role of G6PC in clear cell renal cell carcinoma
Cited by: 23
Author(s): Wenhao Xu, Yue Xu, Xi Tian, Aihetaimujiang Anwaier, Wangrui Liu, Jun Wang, Wenkai Zhu, Dalong Cao, Hong‐Kai Wang, Guohai Shi, Yuanyuan Qu, Hai‐Liang Zhang, Dingwei Ye
Software Mentions: 2
Published: over 4 years ago

10.1111/jcmm.16378

Identification of autophagy‐related long non‐coding RNA prognostic signature for breast cancer
Cited by: 29
Author(s): Qianxue Wu, Qing Li, Wenming Zhu, Xiang Zhang, Hongyuan Li
Software Mentions: 2
Published: over 3 years ago

10.1186/s12859-020-03911-w

Compositional zero-inflated network estimation for microbiome data
Cited by: 6
Author(s): Min Jin Ha, Junghi Kim, Jessica Galloway-Peña, Kim Anh, Christine B. Peterson
Software Mentions: 2
Published: almost 4 years ago

10.1016/j.jclinepi.2020.12.005

Penalization and shrinkage methods produced unreliable clinical prediction models especially when sample size was small
Cited by: 45
Author(s): Richard D Riley, Kym I E Snell, Glen P. Martin, Rebecca Whittle, Lucinda Archer, Matthew Sperrin, Gary S. Collins
Software Mentions: 2
Published: over 3 years ago

10.3390/jcm4071498

Urinary MicroRNA Profiling Predicts the Development of Microalbuminuria in Patients with Type 1 Diabetes
Cited by: 77
Author(s): Christos Argyropoulos, Kai Wang, José F. Bernardo, Demetrius Ellis, Trevor J. Orchard, David J. Galas, John P. Johnson
Software Mentions: 2
Published: over 9 years ago

10.3390/jcm8040509

A Multivariate Evaluation of 25 Proximal and Distal Risk-Factors for Gambling-Related Harm
Cited by: 29
Author(s): Matthew Browne, Nerilee Hing, Alex Russell, Nancy Greer, Fiona Nicoll, Garry J. Smith
Software Mentions: 2
Published: over 5 years ago

10.3390/jcm8070993

Geospatial-Temporal and Demand Models for Opioid Admissions, Implications for Policy
Cited by: 3
Author(s): Lawrence V. Fulton, Zhijie Dong, F. Benjamin Zhan, Clemens Scott Kruse, Paula Stigler Granados
Software Mentions: 2
Published: over 5 years ago

10.1002/oby.21922

Metabolomic Profiling of Long-Term Weight Change: Role of Oxidative Stress and Urate Levels in Weight Gain
Cited by: 19
Author(s): Cristina Menni, Marie E. Migaud, Gabi Kastenmüller, Tess Pallister, Jonas Zierer, Annette Peters, Robert P. Mohney, Tim D. Spector, Vincenzo Bagnardi, Christian Gieger, Stephen Moore, Ana M. Valdes
Software Mentions: 2
Published: over 7 years ago

10.1371/journal.ppat.1005499

Quantitative Trait Locus Based Virulence Determinant Mapping of the HSV-1 Genome in Murine Ocular Infection: Genes Involved in Viral Regulatory and Innate Immune Networks Contribute to Virulence
Cited by: 31
Author(s): Aaron W. Kolb, Kyubin Lee, Inna V. Larsen, Mark Craven, Curtis R. Brandt
Software Mentions: 2
Published: over 8 years ago

10.1186/1471-2105-14-5

Random generalized linear model: a highly accurate and interpretable ensemble predictor
Cited by: 92
Author(s): Song Lin, Peter Langfelder, Steve Horvath
Software Mentions: 2
Published: almost 12 years ago

10.1016/j.pmedr.2021.101475

A predictive model, and predictors of under-five child malaria prevalence in Ghana: How do LASSO, Ridge and Elastic net regression approaches compare?
Cited by: 5
Author(s): Justice Moses K. Aheto, Henry Ofori Duah, Pascal Agbadi, Emmanuel Kweku Nakua
Software Mentions: 2
Published: about 3 years ago

10.1186/s12859-017-1872-9

Identification of gene pairs through penalized regression subject to constraints
Cited by: 6
Author(s): Rex Shen, Lan Luo, Hui Jiang
Software Mentions: 2
Published: about 7 years ago

10.1186/s13014-019-1250-z

Development and validation of a model for temporal lobe necrosis for nasopharyngeal carcinoma patients with intensity modulated radiation therapy
Cited by: 17
Author(s): Jiazhou Wang, Yibing Miao, Xiaomin Ou, Xiaoshen Wang, Xianghuo He, Chunying Shen, Hongmei Ying, Weigang Hu, Chaosu Hu
Software Mentions: 2
Published: over 5 years ago

10.1186/s12931-020-01492-z

Risk factors for the critical illness in SARS-CoV-2 infection: a multicenter retrospective cohort study
Cited by: 8
Author(s): Sijing Cheng, Dingfeng Wu, Jie Li, Yifeng Zou, Yao Wan, Lihan Shen, Lixin Zhu, Mǎng Shī, Linlin Hou, Tao Xu, Na Jiao, Yichen Li, Yibo Huang, Zhipeng Tang, Mingfang Xu, Shusong Jiang, Maokun Li, Gong Yan, Ping Lan, Rong Zhu
Software Mentions: 2
Published: about 4 years ago

10.1186/s13049-017-0392-y

A novel scoring system for predicting the neurologic prognosis prior to the initiation of induced hypothermia in cases of post-cardiac arrest syndrome: the CAST score
Cited by: 26
Author(s): Mitsuaki Nishikimi, Naoyuki Matsuda, Kazumi Matsui, Kunihiko Takahashi, Tadashi Ejima, Keibun Liu, Takayuki Ogura, Michiko Higashi, Hitoshi Umino, Go Makishi, Atsushi Numaguchi, Satoru Matsushima, Hideki Tokuyama, Mitsunobu Nakamura, Shigeyuki Matsui
Software Mentions: 2
Published: over 7 years ago

10.1038/srep09112

Monitoring Disease Trends using Hospital Traffic Data from High Resolution Satellite Imagery: A Feasibility Study
Cited by: 17
Author(s): Elaine O. Nsoesie, Patrick J. Butler, Naren Ramakrishnan, Sumiko R. Mekaru, John S. Brownstein
Software Mentions: 2
Published: over 9 years ago

10.1038/srep15563

Novel Monte Carlo approach quantifies data assemblage utility and reveals power of integrating molecular and clinical information for cancer prognosis
Cited by: 0
Author(s): Wim Verleyen, Simon P. Langdon, Dana Faratian, David J. Harrison, V. Anne Smith
Software Mentions: 2
Published: about 9 years ago

Projects: pypi: glmnet

Papers Mentioning glmnet 1,607