pypi: ggplot | Projects | Ecosyste.ms: Papers

10.1371/journal.pone.0087628

Single-Kernel Ionomic Profiles Are Highly Heritable Indicators of Genetic and Environmental Influences on Elemental Accumulation in Maize Grain (Zea mays)
Cited by: 59
Author(s): Ivan Baxter, Gregory R. Ziegler, Brett Lahner, Michael V. Mickelbart, Rachel Foley, John Danku, Paul R. Armstrong, David E. Salt, Owen A. Hoekenga
Software Mentions: 3
Published: almost 11 years ago

10.1371/journal.pone.0202054

Enteric virome of Ethiopian children participating in a clean water intervention trial
Cited by: 29
Author(s): Eda Altan, Kristen Aiemjoy, Tung Gia Phan, Xutao Deng, Solomon Aragie, Zerihun Tadesse, Kelly Callahan, Jeremy D. Keenan, Eric Delwart
Software Mentions: 3
Published: over 6 years ago

10.1371/journal.pone.0209535

How to build a fruit: Transcriptomics of a novel fruit type in the Brassiceae
Cited by: 4
Author(s): Shane Carey, Kerrin Mendler, Jocelyn C. Hall
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0250433

Temporal clustering of disorder events during the COVID-19 pandemic
Cited by: 12
Author(s): Gian Maria Campedelli, Maria R. D'Orsogña
Software Mentions: 3
Published: over 3 years ago

10.1371/journal.pone.0250324

Opioid Treatment Deserts: Concept development and application in a US Midwestern urban county
Cited by: 14
Author(s): Ayaz Hyder, Jinhyung Lee, Ashley Dundon, Lauren T. Southerland, David All, Gretchen Clark Hammond, Harvey J. Miller
Software Mentions: 3
Published: over 3 years ago

10.1371/journal.pone.0234955

Estimating the prevalence and risk of COVID-19 among international travelers and evacuees of Wuhan through modeling and case reports
Cited by: 20
Author(s): George Luo, Michael L. McHenry, John J. Letterio
Software Mentions: 3
Published: over 4 years ago

10.1371/journal.pone.0256563

Evidence for an increase in cannabis use in Iran – A systematic review and trend analysis
Cited by: 10
Author(s): Yasna Rostam–Abadi, Jaleh Gholami, Masoumeh Amin-Esmaeili, Shahab Baheshmat, Marziyeh Hamzehzadeh, Hossein Rafiemanesh, Morteza Nasserbakht, Leila Ghalichi, Anousheh Safarcherati, Farhad Taremian, Ramin Mojtabai, Afarin Rahimi‐Movaghar
Software Mentions: 3
Published: about 3 years ago

10.1371/journal.pone.0219385

Association of MAOA genetic variants and resilience with psychosocial stress: A longitudinal study of Syrian refugees
Cited by: 17
Author(s): Christopher J. Clukay, Rana Dajani, Kristin Hadfield, Jacklyn Quinlan, Catherine Panter‐Brick, Connie J. Mulligan
Software Mentions: 3
Published: over 5 years ago

10.3390/cancers13040649

Mutational Landscape of Virus- and UV-Associated Merkel Cell Carcinoma Cell Lines Is Comparable to Tumor Tissue
Cited by: 15
Author(s): Kai Horny, Patricia Gerhardt, Angela Hebel-Cherouny, Corinna Wülbeck, Jochen Utikal, Jürgen C. Becker
Software Mentions: 3
Published: almost 4 years ago

10.3390/cancers13092161

Low Plasma Citrate Levels and Specific Transcriptional Signatures Associated with Quiescence of CD34+ Progenitors Predict Azacitidine Therapy Failure in MDS/AML Patients
Cited by: 1
Author(s): Pavla Kořalková, Monika Beličková, David Kundrát, Michaela Dostálová Merkerová, Zdeněk Krejčík, Katarína Szikszai, Monika Kaisrlikova, Jitka Veselá, Pavla Vyhlidalova, Jan Stetka, Alžběta Hlaváčková, Jiřı́ Suttnar, Patrik Flodr, J Stříteský, Anna Jonášová, Jaroslav Čermák, Vladimír Divoký
Software Mentions: 3
Published: over 3 years ago

10.3390/cancers12010200

Deep Sequencing Analysis Reveals Distinctive Non-Coding RNAs When Comparing Tumor Multidrug-Resistant Cells and Extracellular Vesicles with Drug-Sensitive Counterparts
Cited by: 13
Author(s): Diana Sousa, Rune Matthiesen, Raquel T. Lima, M. Helena Vasconcelos
Software Mentions: 3
Published: almost 5 years ago

10.1242/dev.199459

Anterior expansion and posterior addition to the notochord mechanically coordinate zebrafish embryo axis elongation
Cited by: 10
Author(s): Susannah B. P. McLaren, Benjamin Steventon
Software Mentions: 3
Published: over 3 years ago

10.3390/diagnostics11081364

Pepsinogen and Serum IgG Detection Is a Valuable Diagnostic Method for Helicobacter pylori Infection in a Low-Prevalence Country: A Report from Sri Lanka
Cited by: 5
Author(s): Dalla Doohan, Kartika Afrida Fauzia, Jeewantha Rathnayake, M.D. Lamawansa, Langgeng Agung Waskito, Vo Phuoc Tuan, Dashdorj Azzaya, Evariste Tshibangu Kabamba, Bui Hoang Phuc, Shamshul Ansari, Junko Akada, Takashi Matsumoto, Tomohisa Uchida, Takeshi Matsuhisa, Yoshio Yamaoka
Software Mentions: 3
Published: over 3 years ago

10.3390/diagnostics11061016

Contrast-Enhanced Black Blood MRI Sequence Is Superior to Conventional T1 Sequence in Automated Detection of Brain Metastases by Convolutional Neural Networks
Cited by: 5
Author(s): Jonathan Kottlors, Simon Geißen, Hannah Jendreizik, Nils Große Hokamp, Philipp Fervers, Lenhard Pennig, Kai Roman Laukamp, Christoph Kabbasch, David Maintz, Marc Schlamann, Jan Borggrefe
Software Mentions: 3
Published: over 3 years ago

10.1242/dmm.048922

Modulation of serotonin in the gut-liver neural axis ameliorates the fatty and fibrotic changes in non-alcoholic fatty liver
Cited by: 12
Author(s): Masayoshi Ko, Kenya Kamimura, Takashi Owaki, Takuro Nagoya, Norihiro Sakai, Itsuo Nagayama, Yusuke Niwa, Osamu Shibata, Chiyumi Oda, Shinichi Morita, Atsushi Kimura, Ryosuke Inoue, Toru Setsu, Akira Sakamaki, Takeshi Yokoo, Shuji Terai
Software Mentions: 3
Published: over 3 years ago

10.1002/ece3.7656

Automatic detection of fish and tracking of movement for ecology
Cited by: 33
Author(s): Sebastian Lopez‐Marcano, Eric L. Jinks, Christina Buelow, Christopher J. Brown, Dadong Wang, Branislav Kusý, Ellen M. Ditria, Rod M. Connolly
Software Mentions: 3
Published: over 3 years ago

10.1002/ece3.7929

Assessing age, breeding stage, and mating activity as drivers of variation in the reproductive microbiome of female tree swallows
Cited by: 6
Author(s): Jessica Hernandez, Catherine Hucul, Emily Reasor, Taryn J Smith, Joel W. McGlothlin, David C. Haak, Lisa K. Belden, Ignacio T. Moore
Software Mentions: 3
Published: over 3 years ago

10.1002/ece3.261

Introduction pathway and climate trump ecology and life history as predictors of establishment success in alien frogs and toads
Cited by: 28
Author(s): Alfredo Rago, Geoffrey M. While, Tobias Uller
Software Mentions: 3
Published: over 12 years ago

10.1002/ece3.5759

Resilience to changes in lake trophic state: Nutrient allocation into Daphnia resting eggs
Cited by: 6
Author(s): Jana Isanta Navarro, Carmen Kowarik, M. Wessels, Dietmar Straile, Dominik Martin‐Creuzburg
Software Mentions: 3
Published: about 5 years ago

10.3389/fendo.2021.666194

Observations of the Effects of Maternal Fasting Plasma Glucose Changes in Early Pregnancy on Fetal Growth Profiles and Birth Outcomes
Cited by: 2
Author(s): Fei Guo, Yindi Liu, Zheng Ding, Yong Zhang, Chen Zhang, Jianxia Fan
Software Mentions: 3
Published: over 3 years ago

10.3389/fgene.2021.648158

Identification and Comparative Analysis of Long Non-coding RNAs in High- and Low-Fecundity Goat Ovaries During Estrus
Cited by: 3
Author(s): Yaokun Li, Xiangping Xu, Ming Deng, Xian Zou, Zhifeng Zhao, Sixiu Huang, Dewu Liu, Guangbin Liu
Software Mentions: 3
Published: over 3 years ago

10.3389/fimmu.2017.00221

Computational Model Reveals Limited Correlation between Germinal Center B-Cell Subclone Abundancy and Affinity: Implications for Repertoire Sequencing
Cited by: 14
Author(s): Polina Reshetova, Barbera D. C. van Schaik, Paul L. Klarenbeek, Marieke E. Doorenspleet, Rebecca E. E. Esveldt, Paul‐Peter Tak, Jeroen E. J. Guikema, Niek de Vries, Antoine H. C. van Kampen
Software Mentions: 3
Published: over 7 years ago

10.3389/fimmu.2019.01315

Development of a Comprehensive Antibody Staining Database Using a Standardized Analytics Pipeline
Cited by: 53
Author(s): El-ad David Amir, Brian Lee, Paul Badoual, Michael E. Gordon, Xinzheng V. Guo, Miriam Mérad, Adeeb Rahman
Software Mentions: 3
Published: over 5 years ago

10.3389/fimmu.2018.00821

Acute Zika Virus Infection in an Endemic Area Shows Modest Proinflammatory Systemic Immunoactivation and Cytokine-Symptom Associations
Cited by: 27
Author(s): Jéssica Barletto de Sousa Barros, Paulo Alex Neves da Silva, Rosemary de Carvalho Rocha Koga, Patrícia Gonzalez-Dias, José Rodrigues Carmo Filho, Patrícia Resende Alo Nagib, Verônica Coelho, Hidehiko Nakaya, Simone Gonçalves Fonseca, Irmtraut Araci Hoffmann Pfrimer
Software Mentions: 3
Published: over 6 years ago

10.3389/fmicb.2021.628792

Heterogeneity of Microbial Communities in Soils From the Antarctic Peninsula Region
Cited by: 14
Author(s): Pablo Almela, Ana Justel, Antonio Quesada
Software Mentions: 3
Published: almost 4 years ago

10.3389/fmicb.2021.707281

Comparative Mitogenomic Analysis and the Evolution of Rhizoctonia solani Anastomosis Groups
Cited by: 3
Author(s): Runmao Lin, Y. L. Xia, Yao Liu, Danhua Zhang, Xiang Xiao, Xianyu Niu, Linjia Jiang, Xiaolin Wang, Aiping Zheng
Software Mentions: 3
Published: about 3 years ago

10.3389/fmicb.2020.565367

Effects of Rearing Conditions and Sex on Cecal Microbiota in Ducks
Cited by: 13
Author(s): Chunhong Zhu, Wenjuan Xu, Tao Zhang, Wenming Song, Hongxiang Liu, Shuangjie Zhang, Huifang Li
Software Mentions: 3
Published: about 4 years ago

10.3389/fmicb.2017.00816

Adaptive Laboratory Evolution of Antibiotic Resistance Using Different Selection Regimes Lead to Similar Phenotypes and Genotypes
Cited by: 60
Author(s): Leonie Johanna Jahn, Christian Munck, Mostafa Mostafa Hashim Ellabaan, Morten Otto Alexander Sommer
Software Mentions: 3
Published: over 7 years ago

10.3389/fmicb.2020.01909

Validating an Automated Nucleic Acid Extraction Device for Omics in Space Using Whole Cell Microbial Reference Standards
Cited by: 8
Author(s): Camilla Urbaniak, Season Wong, Scott Tighe, Arunkumar Arumugam, Bo Liu, Ceth W. Parker, Jason M. Wood, Nitin Kumar Singh, Dana J. Skorupa, Brent M. Peyton, Ryan Jenson, Fathi Karouia, Julie A. Dragon, Kasthuri Venkateswaran
Software Mentions: 3
Published: over 4 years ago

10.3389/fmicb.2020.590111

Ethanol-Enriched Substrate Facilitates Ambrosia Beetle Fungi, but Inhibits Their Pathogens and Fungal Symbionts of Bark Beetles
Cited by: 11
Author(s): Maximilian Lehenberger, Markus Benkert, Peter H. W. Biedermann
Software Mentions: 3
Published: almost 4 years ago

10.3389/fmicb.2019.02616

Bacterial and Fungal Communities Are Differentially Modified by Melatonin in Agricultural Soils Under Abiotic Stress
Cited by: 23
Author(s): Andrew P. Madigan, Eleonora Egidi, Frank Bedon, Ashley E. Franks, Kim M. Plummer
Software Mentions: 3
Published: almost 5 years ago

10.3389/fmicb.2016.01753

Deconstructing the Bat Skin Microbiome: Influences of the Host and the Environment
Cited by: 72
Author(s): Christine V. Avena, Laura Wegener Parfrey, Jonathan W. Leff, Holly Archer, Winifred F. Frick, Kate E. Langwig, A. Marm Kilpatrick, Karen Powers, Jeffrey T. Foster, Valerie J. McKenzie
Software Mentions: 3
Published: about 8 years ago

10.3389/fonc.2020.00788

The Landscape of Iron Metabolism-Related and Methylated Genes in the Prognosis Prediction of Clear Cell Renal Cell Carcinoma
Cited by: 15
Author(s): Yanhua Mou, Yao Zhang, Jinchun Wu, Busheng Hu, Chunfang Zhang, Chaojun Duan, Bin Li
Software Mentions: 3
Published: over 4 years ago

10.3389/fonc.2020.637880

Corrigendum: Bevacizumab Plus FOLFOX-4 Combined With Deep Electro-Hyperthermia as First-line Therapy in Metastatic Colon Cancer: A Pilot Study
Cited by: 0
Author(s): Girolamo Ranieri, Carmelo Laface, Mariarita Laforgia, Simona De Summa, Mariangela Porcelli, Francesco Macina, Michele Ammendola, P. Molinari, Gianfranco Lauletta, Alessandra Di Palo, Giuseppe Rubini, Cristina Ferrari, Cosmo Damiano Gadaleta
Software Mentions: 3
Published: almost 4 years ago

10.3389/fonc.2021.711756

Comprehensive Pan-Cancer Analysis and the Regulatory Mechanism of ASF1B, a Gene Associated With Thyroid Cancer Prognosis in the Tumor Micro-Environment
Cited by: 9
Author(s): Jing Ma, Wei Han, Kai Lǚ
Software Mentions: 3
Published: over 3 years ago

10.3389/fonc.2020.590707

Bevacizumab Plus FOLFOX-4 Combined With Deep Electro-Hyperthermia as First-line Therapy in Metastatic Colon Cancer: A Pilot Study
Cited by: 14
Author(s): Girolamo Ranieri, Carmelo Laface, Mariarita Laforgia, Simona De Summa, Mariangela Porcelli, Francesco Macina, Michele Ammendola, P. Molinari, Gianfranco Lauletta, Alessandra Di Palo, Giuseppe Rubini, Cristina Ferrari, Cosmo Damiano Gadaleta
Software Mentions: 3
Published: about 4 years ago

10.3389/fonc.2021.712041

RhoC Modulates Cell Junctions and Type I Interferon Response in Aggressive Breast Cancers
Cited by: 3
Author(s): Hannah Abraham, Peter Ulintz, Laura Goo, Joel A. Yates, Andrew C. Little, Liwei Bao, Zhifen Wu, Sofía D. Merajver
Software Mentions: 3
Published: about 3 years ago

10.3389/fpls.2021.660337

Fire Blight Susceptibility in Lilium spp. Correlates to Sensitivity to Botrytis elliptica Secreted Cell Death Inducing Compounds
Cited by: 4
Author(s): Michele C. Malvestiti, Richard G. H. Immink, Paul Arens, Thomas Quiroz-Monnens, J.A.L. van Kan
Software Mentions: 3
Published: over 3 years ago

10.3389/fpls.2021.684619

Identification, Characterization, and Expression Profile Analysis of the mTERF Gene Family and Its Role in the Response to Abiotic Stress in Barley (Hordeum vulgare L.)
Cited by: 4
Author(s): Tingting Li, Wenqiu Pan, Yiyuan Yuan, Ying Liu, Yihan Li, Xiaoyu Wu, Fei Wang, Licao Cui
Software Mentions: 3
Published: over 3 years ago

10.3389/fpsyg.2016.00514

On the Development of Parafoveal Preprocessing: Evidence from the Incremental Boundary Paradigm
Cited by: 20
Author(s): Christina Marx, Florian Hutzler, Sarah Schuster, Stefan Hawelka
Software Mentions: 3
Published: over 8 years ago

10.1534/g3.118.200162

Rapid Low-Cost Assembly of the Drosophila melanogaster Reference Genome Using Low-Coverage, Long-Read Sequencing
Cited by: 73
Author(s): Edwin Solares, Mahul Chakraborty, Danny E. Miller, Shannon Kalsow, Kate Hall, Anoja Perera, J. J. Emerson, R. Scott Hawley
Software Mentions: 3
Published: about 6 years ago

10.1093/g3journal/jkab163

Nuku, a family of primate retrocopies derived from KU70
Cited by: 0
Author(s): Paul A. Rowley, Aisha Ellahi, Kyudong Han, Jagdish Suresh Patel, James T. Van Leuven, Sara L. Sawyer
Software Mentions: 3
Published: over 3 years ago

10.3390/genes10010062

A High-Quality De novo Genome Assembly from a Single Mosquito Using PacBio Sequencing
Cited by: 105
Author(s): Sarah B. Kingan, Haynes Heaton, Juliana Cudini, Christine Lambert, Primo Baybayan, Brendan D. Galvin, Richard Durbin, Jonas Korlach, Mara K. N. Lawniczak
Software Mentions: 3
Published: almost 6 years ago

10.1186/s13059-020-02045-9

Decoding the evolutionary response to prostate cancer therapy by plasma genome sequencing
Cited by: 11
Author(s): Naveen Ramesh, Emi Sei, Pei Ching Tsai, Shanshan Bai, Yuehui Zhao, Patricia Troncoso, Paul G. Corn, Christopher J. Logothetis, Amado J. Zurita, Nicholas E. Navin
Software Mentions: 3
Published: over 4 years ago

10.1093/gbe/evw094

Pooled Enrichment Sequencing Identifies Diversity and Evolutionary Pressures at NLR Resistance Genes within a Wild Tomato Population
Cited by: 47
Author(s): Remco Stam, Daniela Scheikl, Aurélien Tellier
Software Mentions: 3
Published: over 8 years ago

10.1080/19490976.2021.1911534

Intestinal microbiota drives cholestasis-induced specific hepatic gene expression patterns
Cited by: 13
Author(s): Oriol Juanola, Mohsin Hassan, Pranav Kumar, Bahtiyar Yılmaz, Irene Keller, Cédric Simillion, Cornelius Engelmann, Frank Tacke, Jean‐François Dufour, Andrea De Gottardi, Sheida Moghadamrad
Software Mentions: 3
Published: almost 4 years ago

10.1038/s41438-020-00349-2

Multiple-population QTL mapping of maturity and fruit-quality traits reveals LG4 region as a breeding target in sweet cherry (Prunus avium L.)
Cited by: 31
Author(s): Alejandro Calle, Ana Wünsch
Software Mentions: 3
Published: over 4 years ago

10.1038/s41438-020-00347-4

Major-effect candidate genes identified in cultivated strawberry (Fragaria × ananassa Duch.) for ellagic acid deoxyhexoside and pelargonidin-3-O-malonylglucoside biosynthesis, key polyphenolic compounds
Cited by: 17
Author(s): Jahn Davik, Kjersti Aaby, Matteo Buti, Muath Alsheikh, Nada Šurbanovski, Stefan Martens, D. Røen, Daniel J. Sargent
Software Mentions: 3
Published: over 4 years ago

10.7150/jca.44915

Association of preoperative systemic Immune-inflammation Index and Prognostic Nutritional Index with survival in patients with Upper Tract Urothelial Carcinoma
Cited by: 13
Author(s): Yangqin Zheng, Dongdong Yu, Zhixian Yu, Da Zhao, Yuming Chen, Wu Chen, Yeping Li, Baihan Lin, Xianhua Gao
Software Mentions: 3
Published: almost 5 years ago

10.1111/jcmm.16769

Axl‐inhibitor bemcentinib alleviates mitochondrial dysfunction in the unilateral ureter obstruction murine model
Cited by: 8
Author(s): August Hoel, Tarig Al-Hadi Osman, Fredrik Hoel, Hassan Osman Alhassan Elsaid, Tony Chen, Lea Landolt, Janka Bábíčková, Karl Johan Tronstad, James B. Lorens, Gro Gausdal, Hanspeter Marti, Jessica Furriol
Software Mentions: 3
Published: over 3 years ago

10.1186/s13321-021-00524-0

Ensemble completeness in conformer sampling: the case of small macrocycles
Cited by: 4
Author(s): Lea Seep, Anne Bonin, Katharina Meier, Holger Diedam, Andreas H. Göller
Software Mentions: 3
Published: over 3 years ago

10.1093/jxb/erx349

Transfer of a starch phenotype from wild wheat to bread wheat by deletion of a locus controlling B-type starch granule content
Cited by: 21
Author(s): Tansy Chia, Nikolai M Adamski, Benedetta Saccomanno, Andrew J. Greenland, Alastair Nash, Cristóbal Uauy, Kay Trafford
Software Mentions: 3
Published: about 7 years ago

10.1371/journal.ppat.1007875

Global analysis of polysome-associated mRNA in vesicular stomatitis virus infected cells
Cited by: 20
Author(s): William J. Neidermyer, Sean P. J. Whelan
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.ppat.1008803

Closely related reovirus lab strains induce opposite expression of RIG-I/IFN-dependent versus -independent host genes, via mechanisms of slow replication versus polymorphisms in dsRNA binding σ3 respectively
Cited by: 17
Author(s): Adil Mohamed, Prathyusha Konda, Heather E. Eaton, Shashi Gujar, James R. Smiley, Maya Shmulevitz
Software Mentions: 3
Published: about 4 years ago

10.1038/srep38096

Whole-genome scanning for the litter size trait associated genes and SNPs under selection in dairy goat (Capra hircus)
Cited by: 81
Author(s): Fang-Nong Lai, Hong-Li Zhai, Ming Cheng, Jun‐Yu Ma, Shun‐Feng Cheng, Wei Ge, Guoliang Zhang, Junjie Wang, Ruiqian Zhang, Xue Wang, Min Liu, Jiuzhou Song, Wei Shen
Software Mentions: 3
Published: almost 8 years ago

10.1038/s41598-018-35920-4

Cytokine Thresholds in Gingival Crevicular Fluid with Potential Diagnosis of Chronic Periodontitis Differentiating by Smoking Status
Cited by: 16
Author(s): Nora Arias-Bujanda, Alba Regueira-Iglesias, Manuela Alonso-Sampedro, Maria Mercedes González-Peteiro, Álex Mira, Carlos Balsa-Castro, Inmaculada Tomás
Software Mentions: 3
Published: almost 6 years ago

10.1038/s41598-019-43037-5

Remote underwater video reveals higher fish diversity and abundance in seagrass meadows, and habitat differences in trophic interactions
Cited by: 28
Author(s): Salvador Zarco‐Perello, Susana Enríquez
Software Mentions: 3
Published: over 5 years ago

10.1038/s41598-020-60656-5

Genomic alterations and abnormal expression of APE2 in multiple cancers
Cited by: 20
Author(s): Katherine A. Jensen, Xinghua Shi, Yan Shen Shan
Software Mentions: 3
Published: over 4 years ago

10.1038/s41598-020-73897-1

Daily mapping of Australian Plague Locust abundance
Cited by: 3
Author(s): Stephane Mangeon, Allan Spessa, Edward Deveson, Ross Darnell, Darren J. Kriticos
Software Mentions: 3
Published: about 4 years ago

10.1038/s41598-020-80168-6

Global tissue transcriptomic analysis to improve genome annotation and unravel skin pigmentation in goldfish
Cited by: 14
Author(s): Wei Gan, Yu Wen Chung-Davidson, Zelin Chen, Shiying Song, Weicheng Cui, Wei He, Qinghua Zhang, Weiming Li, Mingyou Li, Jianfeng Ren
Software Mentions: 3
Published: almost 4 years ago

10.1038/s41598-021-89267-4

Mitigating belief projection in explainable artificial intelligence via Bayesian teaching
Cited by: 26
Author(s): Scott Cheng‐Hsin Yang, Wai Keen Vong, Ravi B. Sojitra, Tomas Folke, Patrick Shafto
Software Mentions: 3
Published: over 3 years ago

10.1038/s41598-021-92092-4

Genome sequencing and de novo assembly of the giant unicellular alga Acetabularia acetabulum using droplet MDA
Cited by: 0
Author(s): Ina Jungersen Andresen, Russell J. S. Orr, Anders K. Krabberød, Kamran Shalchian-Tabrizi, Jon Bråte
Software Mentions: 3
Published: over 3 years ago

10.1038/s41598-021-92641-x

Natural variants in SARS-CoV-2 Spike protein pinpoint structural and functional hotspots with implications for prophylaxis and therapeutic strategies
Cited by: 12
Author(s): Suman Pokhrel, Benjamin R. Kraemer, Scott Burkholz, Daria Mochly‐Rosen
Software Mentions: 3
Published: over 3 years ago

10.3390/s21030924

Validation of Real-Time Kinematic (RTK) Devices on Sheep to Detect Grazing Movement Leaders and Social Networks in Merino Ewes
Cited by: 8
Author(s): Hamideh Keshavarzi, Lee C, Mark E. Johnson, David Abbott, Wei Ni, Dennis Campbell
Software Mentions: 3
Published: almost 4 years ago

10.1007/s00066-020-01731-8

Is prone free breathing better than supine deep inspiration breath-hold for left whole-breast radiotherapy? A dosimetric analysis
Cited by: 14
Author(s): X. Wang, O. Fargier-Bochaton, G. Dipasquale, M. Laouiti, Melpomeni Kountouri, Olena Gorobets, Nam P. Nguyen, Raymond Miralbell, Vincent Vinh-Hung
Software Mentions: 3
Published: almost 4 years ago

10.1128/mSystems.00134-17

Fecal Microbiota Transplantation in Gestating Sows and Neonatal Offspring Alters Lifetime Intestinal Microbiota and Growth in Offspring
Cited by: 54
Author(s): Ursula M. McCormack, Tânia Curião, Toby Wilkinson, Barbara U. Metzler‐Zebeli, Henry Reyer, Tomás Ryan, Julia A. Calderon-Diaz, Fiona Crispie, Paul D. Cotter, Christopher J. Creevey, Gillian E. Gardiner, Peadar G. Lawlor
Software Mentions: 3
Published: over 6 years ago

10.1038/s41396-020-00876-9

A genomic view of the microbiome of coral reef demosponges
Cited by: 56
Author(s): Steven J. Robbins, Weizhi Song, J. Pamela Engelberts, Bettina Glasl, Beate M. Slaby, Joel A. Boyd, Emma Marangon, Emmanuelle S. Botté, Patrick W. Laffy, Torsten Thomas, Nicole S. Webster
Software Mentions: 3
Published: almost 4 years ago

10.1038/s41396-019-0551-4

Biodiversity of protists and nematodes in the wild nonhuman primate gut
Cited by: 30
Author(s): Allison E. Mann, Florent Mazel, Matthew A. Lemay, Evan Morien, Vincent Billy, Martín M. Kowalewski, Anthony Di Fiore, Andrés Link, Tony L. Goldberg, Stacey R. Tecot, Andrea L. Baden, Andrés Gómez, Michelle L. Sauther, Frank P. Cuozzo, Gillian A.O. Rice, Nathaniel J. Dominy, Rebecca M. Stumpf, Rebecca J. Lewis, Larissa Swedell, Katherine R. Amato, Laura Wegener Parfrey
Software Mentions: 3
Published: about 5 years ago

10.1002/jmd2.12133

Onset of psychiatric signs and impaired neurocognitive domains in inherited metabolic disorders: A case series
Cited by: 0
Author(s): François Medjkane, Marine Bohet, Marielle Ister, David Cohen, Aesa Parenti, Majda Janati, Karine Mention, Dries Dobbelaere, Renaud Jardri
Software Mentions: 3
Published: almost 4 years ago

10.2196/24305

Machine-Learning Monitoring System for Predicting Mortality Among Patients With Noncancer End-Stage Liver Disease: Retrospective Study
Cited by: 9
Author(s): Yu Lin, Ray Jade Chen, Jui Hsiang Tang, Cheng Yu, Jenny L Wu, Li Chuan Chen, Shy Shin Chang
Software Mentions: 3
Published: about 4 years ago

10.7554/eLife.44258

Conversion of random X-inactivation to imprinted X-inactivation by maternal PRC2
Cited by: 35
Author(s): Clair Harris, Marissa Cloutier, Megan Trotter, Michael Hinten, Srimonta Gayen, Zhenhai Du, Wei Xie, Sundeep Kalantry
Software Mentions: 3
Published: over 5 years ago

10.7554/eLife.46259

The Photorhabdus asymbiotica virulence cassettes deliver protein effectors directly into target eukaryotic cells
Cited by: 27
Author(s): Isabella Vlisidou, Alexia Hapeshi, Joseph R. J. Healey, Katie Smart, Guowei Yang, Nicholas R. Waterfield
Software Mentions: 3
Published: about 5 years ago

10.7554/eLife.63997

Quantitative glycoproteomics reveals cellular substrate selectivity of the ER protein quality control sensors UGGT1 and UGGT2
Cited by: 23
Author(s): Benjamin M. Adams, Nathan P Canniff, Kevin P Guay, Ida Signe Bohse Larsen, Daniel N. Hebert
Software Mentions: 3
Published: almost 4 years ago

10.7554/eLife.56801

Slightly beneficial genes are retained by bacteria evolving DNA uptake despite selfish elements
Cited by: 26
Author(s): Bram van Dijk, Paulien Hogeweg, Hilje M. Doekes, Nobuto Takeuchi
Software Mentions: 3
Published: over 4 years ago

10.3390/ijms20092086

Dynamics of Dual Specificity Phosphatases and Their Interplay with Protein Kinases in Immune Signaling
Cited by: 16
Author(s): Yashwanth Subbannayya, Sneha M. Pinto, Korbinian Bösl, T. S. Keshava Prasad, Richard K. Kandasamy
Software Mentions: 3
Published: over 5 years ago

10.3390/ijms21072268

Thymosin β4 Identified by Transcriptomic Analysis from HF Anagen to Telogen Promotes Proliferation of SHF-DPCs in Albas Cashmere Goat
Cited by: 3
Author(s): Bai Dai, Hao Fei, Teng Xu, Bing Zhu, Li-qing Ren, Xiaoyu Han, Dongjun Liu
Software Mentions: 3
Published: over 4 years ago

10.18632/oncotarget.13346

Differentiated regulation of immune-response related genes between LUAD and LUSC subtypes of lung cancers
Cited by: 51
Author(s): Mengzhu Chen, Xiu Ying Liu, Jie Du, Xiu‐Jie Wang, Xia Lei
Software Mentions: 3
Published: about 8 years ago

10.3390/nu11051063

Tart Cherry Concentrate Does Not Alter the Gut Microbiome, Glycaemic Control or Systemic Inflammation in a Middle-Aged Population
Cited by: 22
Author(s): Rebecca Lear, Mary F. O’Leary, Lee O’Brien Andersen, Corey C. Holt, Christen Rune Stensvold, Mark van der Giezen, Joanna L. Bowtell
Software Mentions: 3
Published: over 5 years ago

10.1186/s40478-019-0795-2

Multiplex proteomics identifies novel CSF and plasma biomarkers of early Alzheimer’s disease
Cited by: 127
Author(s): Christopher D. Whelan, Niklas Mattsson, Michael W. Nagle, Swetha Vijayaraghavan, Craig Hyde, Randall J. Bateman, Erik Stomrud, Julie Lee, Lori Fitz, Tarek A. Samad, Gayathri Ramaswamy, Richard Margolin, Anders Mälarstig, Oskar Hansson
Software Mentions: 3
Published: about 5 years ago

10.1371/journal.pntd.0004108

Understanding Heterogeneity in the Impact of National Neglected Tropical Disease Control Programmes: Evidence from School-Based Deworming in Kenya
Cited by: 24
Author(s): Birgit Nikolay, Charles Mwandawiro, Jimmy Kihara, Collins Okoyo, Jorge Cano, Mariam T. Mwanje, Hadley Matendechero Sultani, Dorcas Alusala, Hugo C. Turner, Caroline Teti, Joshua V. Garn, Matthew C. Freeman, Elizabeth Allen, Roy M. Anderson, Rachel L. Pullan, Sammy M. Njenga, Simon Brooker
Software Mentions: 2
Published: about 9 years ago

10.1371/journal.pone.0051942

C911: A Bench-Level Control for Sequence Specific siRNA Off-Target Effects
Cited by: 98
Author(s): Eugen Buehler, Yu‐Chi Chen, Scott E. Martin
Software Mentions: 2
Published: almost 12 years ago

10.1038/s41598-020-71263-9

Co-targeting PIM and PI3K/mTOR using multikinase inhibitor AUM302 and a combination of AZD-1208 and BEZ235 in prostate cancer
Cited by: 7
Author(s): Sabina Luszczak, Benjamin S. Simpson, Urszula Stopka‐Farooqui, Vignesh Krishna Sathyadevan, Lina María Carmona Echeverría, Christopher Kumar, Helena Costa, Aiman Haider, Alex Freeman, Charles Jameson, Marzena Ratyńska, Imen Ben‐Salha, Ashwin Sridhar, Greg Shaw, John D. Kelly, Hayley Pye, Kathy Gately, Hayley C. Whitaker, Susan Heavey
Software Mentions: 2
Published: about 4 years ago

10.1038/s41598-020-71430-y

Differences between young and older adults in physiological and subjective responses to emotion induction using films
Cited by: 18
Author(s): Luz Fernández-Aguilar, José Miguel Latorre Postigo, Arturo Martínez-Rodrigo, José Moncho-Bogani, Laura Ros, Pablo Latorre, Jorge Javier Ricarte, Antonio Fernández-Caballero
Software Mentions: 2
Published: about 4 years ago

10.1186/s12864-021-07539-9

Whole-genome analysis of probiotic product isolates reveals the presence of genes related to antimicrobial resistance, virulence factors, and toxic metabolites, posing potential health risks
Cited by: 26
Author(s): Ying Wang, Qian Liang, Boxun Lu, Hong Shen, Shuyan Liu, Yue Shi, Sebastian Leptihn, Hong Li, Wei Jin, Chengzhi Liu, Hailong Xiao, Xiaowei Zheng, Chao Liu, Huan Chen
Software Mentions: 2
Published: over 3 years ago

10.3390/microorganisms6030076

A Comparative Study on the Faecal Bacterial Community and Potential Zoonotic Bacteria of Muskoxen (Ovibos moschatus) in Northeast Greenland, Northwest Greenland and Norway
Cited by: 9
Author(s): Emilie Andersen-Ranberg, Christopher J. Barnes, L. Rasmussen, Alejandro Salgado-Flores, Carsten Grøndahl, Jesper Bruun Mosbacher, Anders J. Hansen, Monica A. Sundset, Niels Martin Schmidt, Christian Sonne
Software Mentions: 2
Published: over 6 years ago

10.3390/antibiotics8030147

Global Internet Data on the Interest in Antibiotics and Probiotics Generated by Google Trends
Cited by: 24
Author(s): Mikołaj Kamińśki, Igor Łoniewski, Wojciech Marlicz
Software Mentions: 2
Published: about 5 years ago

10.1038/s41598-020-73614-y

Manipulation of the gut microbiota by the use of prebiotic fibre does not override a genetic predisposition to heart failure
Cited by: 7
Author(s): Hamdi Jama, April Fiedler, Kirill Tsyganov, Erin M. Nelson, Duncan Horlock, Michael Nakai, Helen Kiriazis, Chad Johnson, Xiao Jun Du, Charles R. Mackay, Francine Z. Marques, David M. Kaye
Software Mentions: 2
Published: about 4 years ago

10.3389/fphar.2020.00078

Genetic Diversity of HLA Class I and Class II Alleles in Thai Populations: Contribution to Genotype-Guided Therapeutics
Cited by: 31
Author(s): Patompong Satapornpong, Pimonpan Jinda, Thawinee Jantararoungtong, Napatrupron Koomdee, Chonlawat Chaichan, Jirawat Pratoomwun, Chalitpon Na Nakorn, Wichai Aekplakorn, Alisa Wilantho, Chumpol Ngamphiw, Sissades Tongsima, Chonlaphat Sukasem
Software Mentions: 2
Published: over 4 years ago

10.1371/journal.pntd.0008199

Multivariate time-series analysis of biomarkers from a dengue cohort offers new approaches for diagnosis and prognosis
Cited by: 6
Author(s): Baptiste Vasey, Anuraj H. Shankar, Bobby Brooke Herrera, Aniuska Becerra, Kris Xhaja, Marión Echenagucia, Sara Machado, Diana María Caicedo, John P. Miller, Paolo Amedeo, Elena N. Naumova, Irene Bosch, Norma Blumenfeld deBosch
Software Mentions: 2
Published: over 4 years ago

10.1186/s12864-020-6579-z

Phytochemical and comparative transcriptome analyses reveal different regulatory mechanisms in the terpenoid biosynthesis pathways between Matricaria recutita L. and Chamaemelum nobile L.
Cited by: 11
Author(s): Yuling Tai, Xiaojuan Hou, Chun Liu, Jun Sun, Chunxiao Guo, Ling Su, Wei Jiang, Chengcheng Ling, Cheng-Xiang Wang, Huanhuan Wang, Guifang Pan, Xiongyuan Si, Yuan Yang
Software Mentions: 2
Published: almost 5 years ago

10.1371/journal.pone.0252671

Can situations awaken emotions? The compilation and evaluation of the Emotional Situation Sentence System (ESSS)
Cited by: 0
Author(s): Yuan Zhao, Ming Yin, Chuanlin Zhu, Chenghui Tan, Shengjie Hu, Dianzhi Liu
Software Mentions: 2
Published: over 3 years ago

10.1038/s41598-020-77533-w

Abnormal microscale neuronal connectivity triggered by a proprioceptive stimulus in dystonia
Cited by: 7
Author(s): Dimitris Sakellariou, Sofia Dall’Orso, Etienne Burdet, Jean-Pierre Lin, Mark Richardson, Verity M. McClelland
Software Mentions: 2
Published: almost 4 years ago

10.1186/s40168-016-0211-0

Disruption of the microbiota across multiple body sites in critically ill children
Cited by: 79
Author(s): Matthew B. Rogers, Brian Firek, Min Shi, Andrew Yeh, Rachel Brower–Sinning, Victoria G. Aveson, Brittany L. Kohl, Anthony Fabio, Joseph A. Carcillo, Michael J. Morowitz
Software Mentions: 2
Published: almost 8 years ago

10.1002/mbo3.1153

Microbiota succession during aerobic stability of maize silage inoculated with Lentilactobacillus buchneri NCIMB 40788 and Lentilactobacillus hilgardii CNCM‐I‐4785
Cited by: 22
Author(s): Pascal Drouin, Julien Tremblay, Justin B. Renaud, Emmanuelle Apper
Software Mentions: 2
Published: almost 4 years ago

10.1007/s00248-020-01677-5

I Like the Way You Eat It: Lemur (Indri indri) Gut Mycobiome and Geophagy
Cited by: 17
Author(s): Luigimaria Borruso, Alice Checcucci, Valeria Torti, Federico Correa, Camillo Sandri, Daine Luise, Luciano Cavani, Monica Marianna Modesto, Caterina Spiezio, Tanja Mimmo, Stefano Cesco, Maura Di Vito, Francesca Bugli, Rose Marie Randrianarison, Marco Gamba, Nianja Jemisa Rarojoson, Cesare Avesani Zaborra, Paola Mattarelli, Paolo Trevisi, Cristina Giacoma
Software Mentions: 2
Published: almost 4 years ago

10.1111/1751-7915.13837

Effect of concentration and hydraulic reaction time on the removal of pharmaceutical compounds in a membrane bioreactor inoculated with activated sludge
Cited by: 12
Author(s): Ana B. Rios‐Miguel, Mike S. M. Jetten, Cornelia U. Welte
Software Mentions: 2
Published: over 3 years ago

10.1016/j.meteno.2016.06.003

The impact of respiration and oxidative stress response on recombinant α-amylase production by Saccharomyces cerevisiae
Cited by: 23
Author(s): José Luis Martínez, Eugenio Meza, Dina Petranović, Jens Nielsen
Software Mentions: 2
Published: almost 8 years ago

10.3390/md15050125

Transcriptome Analysis of Core Dinoflagellates Reveals a Universal Bias towards “GC” Rich Codons
Cited by: 7
Author(s): Ernest Williams, Allen R. Place, Tsvetan R. Bachvaroff
Software Mentions: 2
Published: over 7 years ago

10.1038/s41598-020-78820-2

Evaluation of microalgae polysaccharides as biostimulants of tomato plant defense using metabolomics and biochemical approaches
Cited by: 48
Author(s): Farid Rachidi, Redouane Benhima, Yassine Kasmi, Laïla Sbabou, Hicham El Arroussi
Software Mentions: 2
Published: almost 4 years ago

10.1371/journal.pone.0106689

Illumina TruSeq Synthetic Long-Reads Empower De Novo Assembly and Resolve Complex, Highly-Repetitive Transposable Elements
Cited by: 181
Author(s): Rajiv C. McCoy, Ryan W. Taylor, Timothy A. Blauwkamp, Joanna L. Kelley, Michael A. Kertesz, Dmitry Pushkarev, Dmitri A. Petrov, Anna-Sophie Fiston-Lavier
Software Mentions: 2
Published: about 10 years ago

Projects: pypi: ggplot

Papers Mentioning ggplot 796