Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: pypi: g2gtools

https://packages.ecosyste.ms/registries/pypi.org/packages/g2gtools

A suite of tools for the reconstruction of personal diploid genomes and better coordinate conversion
15 versions
Latest release: almost 6 years ago
23 downloads last month

Papers Mentioning g2gtools 5

Alignment and mapping methodology influence transcript abundance estimation
Cited by: 80
Author(s): Avi Srivastava, Laraib Malik, Hirak Sarkar, Mohsen Zakeri, Fatemeh Almodaresi, Charlotte Soneson, Michael I. Love, Carl Kingsford, Rob Patro
Software Mentions: 13
Published: over 3 years ago

10.18632/aging.101590

A multi-tissue full lifespan epigenetic clock for mice
Cited by: 144
Author(s): Michael J. Thompson, Karolina Chwiałkowska, Liudmilla Rubbi, Aldons J. Lusis, Richard C. Davis, Anuj Srivastava, Ron Korstanje, Gary A. Churchill, Steve Horvath, Matteo Pellegrini
Software Mentions: 3
Published: over 5 years ago

10.15252/msb.20199367

Pan‐tissue analysis of allelic alternative polyadenylation suggests widespread functional regulation
Cited by: 4
Author(s): Yisheng Li, Bernhard Schaefke, Xudong Zou, Min Zhang, Florian Heyd, Wei Sun, Bin Zhang, Guipeng Li, Weizheng Liang, Yuhao He, Juexiao Zhou, Yunfei Li, Liang Fang, Yuhui Hu, Wei Chen
Software Mentions: 3
Published: about 4 years ago

10.3389/fcell.2021.717555

Systematic Analysis of Monoallelic Gene Expression and Chromatin Accessibility Across Multiple Tissues in Hybrid Mice
Cited by: 0
Author(s): Weizheng Liang, Xudong Zou, Guipeng Li, Shaojie Zhou, Chi Tian, Bernhard Schaefke
Software Mentions: 3
Published: over 2 years ago

10.1534/genetics.116.198838

Genomes of the Mouse Collaborative Cross
Cited by: 181
Author(s): Anuj Srivastava, Andrew P. Morgan, Maya L. Najarian, Vishal Kumar Sarsani, J. Sebastian Sigmon, John R. Shorter, Anwica Kashfeen, Rachel McMullan, Lucy H. Williams, Paola Giusti‐Rodríguez, Martin T. Ferris, Patrick F. Sullivan, Pablo Hock, Darla R. Miller, Timothy A. Bell, Leonard McMillan, Gary A. Churchill, Fernando P Pardo Manuel De Villena
Software Mentions: 1
Published: about 7 years ago