Projects: pypi: g2gtools
https://packages.ecosyste.ms/registries/pypi.org/packages/g2gtools
A suite of tools for the reconstruction of personal diploid genomes and better coordinate conversion
15 versions
Latest release: almost 8 years ago
23 downloads last month
Enhanced Analysis
Repository Activity:
Repository Owner:
Churchill's Lab (organization)
Gary Churchill's Lab at The Jackson Laboratory Academic
Gary Churchill's Lab at The Jackson Laboratory Academic
README Analysis:
Science Score: 100/100
Starting Score: 100 points
Bonuses:
-
+20
Academic repository owner
Repository owned by academic institution -
+15
Institutional repository owner
Repository owned by research institution -
+4
Science terms in README
2 scientific terms found in README
Penalties:
-
-10
PyPI ecosystem
General-purpose ecosystem -
-10
No science terms in description
No scientific terms found in description
Very Likely Science (100)
Papers Mentioning g2gtools 5
10.1186/s13059-020-02151-8
Alignment and mapping methodology influence transcript abundance estimationCited by: 80
Author(s): Avi Srivastava, Laraib Malik, Hirak Sarkar, Mohsen Zakeri, Fatemeh Almodaresi, Charlotte Soneson, Michael I. Love, Carl Kingsford, Rob Patro
Software Mentions: 13
Published: almost 6 years ago
10.18632/aging.101590
A multi-tissue full lifespan epigenetic clock for miceCited by: 144
Author(s): Michael J. Thompson, Karolina Chwiałkowska, Liudmilla Rubbi, Aldons J. Lusis, Richard C. Davis, Anuj Srivastava, Ron Korstanje, Gary A. Churchill, Steve Horvath, Matteo Pellegrini
Software Mentions: 3
Published: over 7 years ago
10.15252/msb.20199367
Pan‐tissue analysis of allelic alternative polyadenylation suggests widespread functional regulationCited by: 4
Author(s): Yisheng Li, Bernhard Schaefke, Xudong Zou, Min Zhang, Florian Heyd, Wei Sun, Bin Zhang, Guipeng Li, Weizheng Liang, Yuhao He, Juexiao Zhou, Yunfei Li, Liang Fang, Yuhui Hu, Wei Chen
Software Mentions: 3
Published: about 6 years ago
10.3389/fcell.2021.717555
Systematic Analysis of Monoallelic Gene Expression and Chromatin Accessibility Across Multiple Tissues in Hybrid MiceCited by: 0
Author(s): Weizheng Liang, Xudong Zou, Guipeng Li, Shaojie Zhou, Chi Tian, Bernhard Schaefke
Software Mentions: 3
Published: almost 5 years ago
10.1534/genetics.116.198838
Genomes of the Mouse Collaborative CrossCited by: 181
Author(s): Anuj Srivastava, Andrew P. Morgan, Maya L. Najarian, Vishal Kumar Sarsani, J. Sebastian Sigmon, John R. Shorter, Anwica Kashfeen, Rachel McMullan, Lucy H. Williams, Paola Giusti‐Rodríguez, Martin T. Ferris, Patrick F. Sullivan, Pablo Hock, Darla R. Miller, Timothy A. Bell, Leonard McMillan, Gary A. Churchill, Fernando P Pardo Manuel De Villena
Software Mentions: 1
Published: about 9 years ago