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10.3389/fpls.2020.606463

Dissection for Floral Micromorphology and Plastid Genome of Valuable Medicinal Borages Arnebia and Lithospermum (Boraginaceae)
Cited by: 16
Author(s): Inkyu Park, Sungyu Yang, Jun‐Ho Song, Byeong Cheol Moon
Software Mentions: 1
Published: almost 4 years ago

10.3389/fpls.2019.01206

A Novel QTL Conferring Fusarium Crown Rot Resistance Located on Chromosome Arm 6HL in Barley
Cited by: 9
Author(s): Shang Gao, Zhi Zheng, Haiyan Hu, Haoran Shi, Jian Ma, Yaxi Liu, Yuming Wei, Yu Zheng, Meixue Zhou, Chunji Liu
Software Mentions: 1
Published: about 5 years ago

10.1534/g3.115.023267

Genomic Analysis of ATP Efflux in Saccharomyces cerevisiae
Cited by: 6
Author(s): Theodore W. Peters, Aaron W. Miller, Cendrine Tourette, Hannah Agren, Alan Hubbard, Robert E. Hughes
Software Mentions: 1
Published: almost 9 years ago

10.1093/g3journal/jkab284

Draft genome sequence of a prodigiosin-hyperproducing Serratia marcescens strain isolated from Cairo, Egypt
Cited by: 2
Author(s): Nora M. Elkenawy, Noha H. Youssef, Ramy K. Aziz, Magdy A. Amin, Aymen S. Yassin
Software Mentions: 1
Published: over 3 years ago

10.3390/genes8110293

Prokaryotic Expression and Serodiagnostic Potential of Glyceraldehyde-3-Phosphate Dehydrogenase and Thioredoxin Peroxidase from Baylisascaris schroederi
Cited by: 1
Author(s): Yu Liu, Ying Sun, Xiaobin Gu, Yue Xie, Weiming Lai, Bo Jing, Xuerong Peng, Guangyou Yang
Software Mentions: 1
Published: about 7 years ago

10.3390/genes9110559

Molecular Characterization of Annexin B2, B3 and B12 in Taenia multiceps
Cited by: 6
Author(s): Cheng Guo, Yue Xie, Yuchen Liu, Ning Wang, Jiafei Zhan, Xuan Zhou, Christiana Angel, Xiaobin Gu, Weimin Lai, Xuerong Peng, Guangyou Yang
Software Mentions: 1
Published: about 6 years ago

10.1128/genomeA.00984-15

Draft Genome Sequence of Aquamicrobium defluvii Strain W13Z1, a Psychrotolerant Halotolerant Hydrocarbon-Degrading Bacterium
Cited by: 3
Author(s): Xinxin Wang, Decai Jin, Lisha Zhou, Zhuo Zhang
Software Mentions: 1
Published: about 9 years ago

10.1128/genomeA.01161-17

Draft Genome Sequence of a Novel Chitinophaga sp. Strain, MD30, Isolated from a Biofilm in an Air Conditioner Condensate Pipe
Cited by: 2
Author(s): Xuehua Wan, Maxwell K Darris, Shaobin Hou, Stuart P. Donachie
Software Mentions: 1
Published: about 7 years ago

10.1186/s13059-019-1650-2

Gene duplication and evolution in recurring polyploidization–diploidization cycles in plants
Cited by: 449
Author(s): Xin Qiao, Qionghou Li, Hong Yin, Kaijie Qi, Leiting Li, Runze Wang, Shaoling Zhang, Andrew H. Paterson
Software Mentions: 1
Published: over 5 years ago

10.1093/gbe/evt192

The Complex Evolutionary Dynamics of Hsp70s: A Genomic and Functional Perspective
Cited by: 42
Author(s): Jacek Kominek, Jarosław Marszałek, Cécile Neuvéglise, Elizabeth A. Craig, Barry L. Williams
Software Mentions: 1
Published: almost 11 years ago

10.1016/j.ygeno.2021.05.003

Salmonella Typhi acquires diverse plasmids from other Enterobacteriaceae to develop cephalosporin resistance
Cited by: 18
Author(s): Jobin John Jacob, Agila Kumari Pragasam, Karthick Vasudevan, Balaji Veeraraghavan, Gagandeep Kang, Jacob John, Vasant Nagvekar, Ankur Mutreja
Software Mentions: 1
Published: over 3 years ago

10.1016/j.heliyon.2021.e06542

Cloning, heterologous expression, and characterization of a novel thioesterase from natural sample
Cited by: 2
Author(s): Suharti Suharti, Gita Mahardika, Raissa Raissa, Laksmi Dewi, Heni Yohandini, Made Puspasari Widhiastuty, Aditya Wibawa Sakti, Setyanto Tri Wahyudi, Akhmaloka Akhmaloka
Software Mentions: 1
Published: over 3 years ago

10.4103/0250-474X.73905

Molecular docking studies with rabies virus glycoprotein to design viral therapeutics
Cited by: 17
Author(s): Neha R. Tomar, Vinay Kumar Singh, Soma S. Marla, Rajesh Chandra, Rajiv Kumar, Anil Kumar
Software Mentions: 1
Published: almost 15 years ago

10.1186/1747-5333-4-1

Are figure legends sufficient? Evaluating the contribution of associated text to biomedical figure comprehension
Cited by: 26
Author(s): Hong Yu, Shashank Agarwal, Mark V. Johnston, Aaron M. Cohen
Software Mentions: 1
Published: almost 16 years ago

10.1186/1740-3391-5-3

Glycogen synthase kinase 3, circadian rhythms, and bipolar disorder: a molecular link in the therapeutic action of lithium
Cited by: 117
Author(s): Sevag Kaladchibachi, Bradley W. Doble, Norman Anthopoulos, James R. Woodgett, Armen S. Manoukian
Software Mentions: 1
Published: almost 18 years ago

10.1371/journal.ppat.1002086

Sporangiospore Size Dimorphism Is Linked to Virulence of Mucor circinelloides
Cited by: 127
Author(s): Charles Li, María Cervantes, Deborah J. Springer, Teun Boekhout, Rosa M. Ruiz‐Vázquez, Santiago Torres-Martı́nez, Joseph Heitman, Soo Chan Lee
Software Mentions: 1
Published: over 13 years ago

10.1371/journal.ppat.1002717

Chitohexaose Activates Macrophages by Alternate Pathway through TLR4 and Blocks Endotoxemia
Cited by: 78
Author(s): Santosh Kumar Panda, Sunil Kumar, Nitin Tupperwar, Tushar Vaidya, Anna George, Satyajit Rath, Vineeta Bal, Balachandran Ravindran
Software Mentions: 1
Published: over 12 years ago

10.1038/srep19420

An efficient full-length cDNA amplification strategy based on bioinformatics technology and multiplexed PCR methods
Cited by: 14
Author(s): Nan Chen, Weimin Wang, Huanling Wang
Software Mentions: 1
Published: almost 9 years ago

10.1038/srep27881

Identification of significant precursor gases of secondary organic aerosols from residential wood combustion
Cited by: 136
Author(s): Emily A. Bruns, Imad El Haddad, Jay G. Slowik, Doğuşhan Kılıç, Felix Klein, Urs Baltensperger, A. S. H. Prévôt
Software Mentions: 1
Published: over 8 years ago

10.1038/srep36850

Downregulation of Aedes aegypti chromodomain helicase DNA binding protein 7/Kismet by Wolbachia and its effect on dengue virus replication
Cited by: 5
Author(s): Sultan Asad, Sonja Hall‐Mendelin, Sassan Asgari
Software Mentions: 1
Published: about 8 years ago

10.1038/s41598-017-03750-5

The CCAAT-Binding Complex Controls Respiratory Gene Expression and Iron Homeostasis in Candida Glabrata
Cited by: 22
Author(s): Antonin Thiébaut, Thierry Delaveau, Médine Benchouaia, Julia Boeri, Mathilde Garcia, Gaëlle Lelandais, Frédéric Devaux
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-019-44464-0

Comparative genomic analysis of monosporidial and monoteliosporic cultures for unraveling the complexity of molecular pathogenesis of Tilletia indica pathogen of wheat
Cited by: 7
Author(s): Pallavi Mishra, Ranjeet Maurya, Vijai Kumar Gupta, Pramod W. Ramteke, Soma S. Marla, Anil Kumar
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-019-52935-7

KMT2C, a histone methyltransferase, is mutated in a family segregating non-syndromic primary failure of tooth eruption
Cited by: 12
Author(s): Ali A Assiry, Alia M. Albalawi, Muhammad Sohail Zafar, Siraj DAA Khan, Anhar Ullah, Ahmed Almatrafi, Khushnooda Ramzan, Sulman Basit
Software Mentions: 1
Published: about 5 years ago

10.1038/s41598-019-53968-8

The C-Fern (Ceratopteris richardii) genome: insights into plant genome evolution with the first partial homosporous fern genome assembly
Cited by: 64
Author(s): D. Blaine Marchant, Emily B. Sessa, Paul G. Wolf, Kweon Heo, W. Brad Barbazuk, Pamela S. Soltis, Douglas E. Soltis
Software Mentions: 1
Published: almost 5 years ago

10.1038/s41598-020-63510-w

Telomere Maintenance Genes are associated with Type 2 Diabetes Susceptibility in Northwest Indian Population Group
Cited by: 10
Author(s): Itty Sethi, Varun Sharma, Indu Sharma, Gurvinder Singh, G. M. Bhat, A.J.S. Bhanwer, Swarkar Sharma, Ekta Rai
Software Mentions: 1
Published: over 4 years ago

10.1038/s41598-020-74803-5

Comparative genomic and transcriptomic analyses of chemosensory genes in the citrus fruit fly Bactrocera (Tetradacus) minax
Cited by: 8
Author(s): Cheng Junfeng, Ting Yu, Zhongjian Chen, Shicheng Chen, Yupeng Chen, Lei Gao, Wenhu Zhang, Bo Jiang, Xue Bai, Edward D. Walker, Jun Li, Yongyue Lu
Software Mentions: 1
Published: about 4 years ago

10.1038/s41598-021-83734-8

Mapping of functional elements of the Fab-6 boundary involved in the regulation of the Abd-B hox gene in Drosophila melanogaster
Cited by: 13
Author(s): Nikolay Postika, Paul Schedl, Pavel Georgiev, Olga Kyrchanova
Software Mentions: 1
Published: almost 4 years ago

10.1038/s41598-021-90742-1

Genetic evaluation of the variants using MassARRAY in non-small cell lung cancer among North Indians
Cited by: 3
Author(s): G. M. Bhat, Itty Sethi, Amrita Bhat, Sonali Verma, Divya Bakshi, Bhanu Sharma, Muddasser Nazir, Khursheed A. Dar, D. P. Abrol, Ruchi Shah, Rakesh Kumar
Software Mentions: 1
Published: over 3 years ago

10.1038/s41598-021-92002-8

Identification of antigenic domains and peptides from VP15 of white spot syndrome virus and their antiviral effects in Marsupenaeus japonicus
Cited by: 7
Author(s): Jirayu Boonyakida, Jian Xu, Jun Satoh, Tetsu Nakanishi, Tohru Mekata, Tatsuya Kato, Enoch Y. Park
Software Mentions: 1
Published: over 3 years ago

10.1177/0162243915574602

Why Map Issues? On Controversy Analysis as a Digital Method
Cited by: 127
Author(s): Noortje Marres
Software Mentions: 1
Published: over 9 years ago

10.1186/s40793-017-0291-x

Genomic insights into Mycobacterium simiae human colonization
Cited by: 10
Author(s): José Luis Steffani-Vallejo, Marion E. G. Brunck, Erika Acosta-Cruz, Rafaél Montiel, Francisco Barona‐Gómez
Software Mentions: 1
Published: almost 7 years ago

10.1038/s41398-017-0061-y

Rare loss of function mutations in N-methyl-d-aspartate glutamate receptors and their contributions to schizophrenia susceptibility
Cited by: 37
Author(s): Yanjie Yu, Yingni Lin, Yuto Takasaki, Chenyao Wang, Hiroki Kimura, Jing Xing, Kanako Ishizuka, Miho Toyama, Itaru Kushima, Daisuke Mori, Yuko Arioka, Yuichi Uno, Tomoko Shiino, Yukako Nakamura, Takashi Okada, Mako Morikawa, Masashi Ikeda, Nakao Iwata, Yuko Okahisa, Manabu Takaki, Shinji Sakamoto, Toshiyuki Someya, Jun Egawa, Masahide Usami, Masaki Kodaira, Akira Yoshimi, Tomoko Oya‐Ito, Branko Aleksić, Kinji Ohno, Norio Ozaki
Software Mentions: 1
Published: almost 7 years ago

10.1128/mSphere.00056-18

Talaromyces marneffei simA Encodes a Fungal Cytochrome P450 Essential for Survival in Macrophages
Cited by: 2
Author(s): Kylie J. Boyce, David P. De Souza, Saravanan Dayalan, Shivani Pasricha, Dedreia Tull, Malcolm J. McConville, Alex Andrianopoulos
Software Mentions: 1
Published: over 6 years ago

10.1128/mSystems.00526-21

Promoter Architecture Differences among Alphaproteobacteria and Other Bacterial Taxa
Cited by: 4
Author(s): Kevin S. Myers, Daniel R. Noguera, Timothy J. Donohue
Software Mentions: 1
Published: about 3 years ago

10.1155/2016/3034756

Genetic Characterization and Comparative Genome Analysis ofBrucella melitensisIsolates from India
Cited by: 12
Author(s): Sarwar Azam, Sashi Bhushan Rao, Padmaja Jakka, Veera NarasimhaRao, Bindu Bhargavi, Vivek Kumar Gupta, Girish Radhakrishnan
Software Mentions: 1
Published: almost 9 years ago

10.22034/ibj.22.3.180

Ofatumumab Monoclonal Antibody Affinity Maturation Through in silico Modeling
Cited by: 6
Author(s): Zahra Payandeh, Masoumeh Rajabibazl, Yousef Mortazavi, Azam Rahimpour, Amir Hossein Taromchi
Software Mentions: 1
Published: over 6 years ago

10.3390/ijms17060841

Comparative Mitogenomic Analysis of Species Representing Six Subfamilies in the Family Tenebrionidae
Cited by: 11
Author(s): Hongli Zhang, Bingbing Liu, Xiaoyang Wang, Zhenhai Han, Dongxu Zhang, Caina Su
Software Mentions: 1
Published: over 8 years ago

10.3390/ijms18040720

Differential Proteome Analysis of a Flor Yeast Strain under Biofilm Formation
Cited by: 18
Author(s): Jaime Moreno-García, Juan Carlos Mauricio, Juan J. Moreno, Teresa García‐Martínez
Software Mentions: 1
Published: over 7 years ago

10.3390/ijms20235869

Towards Exploring Toxin-Antitoxin Systems in Geobacillus: A Screen for Type II Toxin-Antitoxin System Families in a Thermophilic Genus
Cited by: 5
Author(s): Rawana N. Alkhalili, Joel Wallenius, Björn Canbäck
Software Mentions: 1
Published: almost 5 years ago

10.3390/ijms21249363

Statistical Optimisation of Phenol Degradation and Pathway Identification through Whole Genome Sequencing of the Cold-Adapted Antarctic Bacterium, Rhodococcus sp. Strain AQ5-07
Cited by: 11
Author(s): Gillian Li Yin Lee, Nur Nadhirah Zakaria, Peter Convey, Hiroyuki Futamata, Azham Zulkharnain, Kenshi Suzuki, Khalilah Abdul Khalil, Noor Azmi Shaharuddin, Siti Aisyah Alias, Gerardo González-Rocha, Siti Aqlima Ahmad
Software Mentions: 1
Published: almost 4 years ago

10.18632/oncotarget.12321

Lipid phosphatase SHIP2 functions as oncogene in colorectal cancer by regulating PKB activation
Cited by: 47
Author(s): Elmer Hoekstra, Asha Das, Marcella Willemsen, Marloes Swets, Peter J.K. Kuppen, C. Janneke van der Woude, Marco J. Bruno, Jigisha P. Shah, Timo L.M. ten Hagen, John D. Chisholm, William G. Kerr, Maikel P. Peppelenbosch, Gwenny M. Fuhler
Software Mentions: 1
Published: about 8 years ago

10.18632/oncotarget.15570

A novel pathogenic splice acceptor site germline mutation in intron 14 of the APC gene in a Chinese family with familial adenomatous polyposis
Cited by: 9
Author(s): Dan Wang, Shengyun Liang, Zhao Zhang, Guoru Zhao, Yuan Hu, Shengran Liang, Xipeng Zhang, Santasree Banerjee
Software Mentions: 1
Published: almost 8 years ago

10.1128/JVI.01924-13

The Human Adenovirus 5 L4 Promoter Is Activated by Cellular Stress Response Protein p53
Cited by: 14
Author(s): Jordan Wright, Keith N. Leppard
Software Mentions: 1
Published: over 11 years ago

10.1186/s12967-015-0525-x

Novel and rare functional genomic variants in multiple autoimmune syndrome and Sjögren’s syndrome
Cited by: 29
Author(s): Angad Johar, Claudio A. Mastronardi, Adriana Rojas-Villarraga, Hardip R. Patel, Aaron Chuah, Kaiman Peng, Angela Higgins, Peter J. Milburn, Stephanie O. Palmer, Maria Fernanda Silva-Lara, Jorge Íván Bonilla Vélez, T. Daniel Andrews, Matthew A. Field, Gavin A. Huttley, Christopher C. Goodnow, Juan Manuel Anaya, Mauricio Arcos‐Burgos
Software Mentions: 1
Published: over 9 years ago

10.1186/s12967-014-0376-x

Clinical significance of plasmacytoid dendritic cells and myeloid-derived suppressor cells in melanoma
Cited by: 52
Author(s): Inès Chevolet, Reinhart Speeckaert, Max Schreuer, Bart Neyns, Olga Krysko, Claus Bachert, Mireille Van Gele, Nanja van Geel, Liève Brochez
Software Mentions: 1
Published: almost 10 years ago

10.1111/acel.13224

Aging‐associated changes in CD47 arrangement and interaction with thrombospondin‐1 on red blood cells visualized by super‐resolution imaging
Cited by: 18
Author(s): Feng Wang, Yanhou Liu, Ting Zhang, Jing Gao, Yangyue Xu, Guangyao Xie, Wenjie Zhao, Hongda Wang, Yong‐Guang Yang
Software Mentions: 1
Published: about 4 years ago

10.3390/ani9060292

Expression Analysis of IZUMO1 Gene during Testicular Development of Datong Yak (Bos Grunniens)
Cited by: 2
Author(s): Qudratullah Kalwar, Xuezhi Ding, Anum Ali Ahmad, Min Chen, Xiaoyun Wu, Pengjia Bao, Ping Yan
Software Mentions: 1
Published: over 5 years ago

10.3390/antibiotics10040378

Novel Soil-Derived Beta-Lactam, Chloramphenicol, Fosfomycin and Trimethoprim Resistance Genes Revealed by Functional Metagenomics
Cited by: 5
Author(s): Inka M. Willms, Maja Grote, Melissa Kocatürk, Lukas Singhoff, Alina Andrea Kraft, Simon Henning Bolz, Heiko Nacke
Software Mentions: 1
Published: over 3 years ago

10.1007/s00005-016-0430-x

Intragenic Variations in BTLA Gene Influence mRNA Expression of BTLA Gene in Chronic Lymphocytic Leukemia Patients and Confer Susceptibility to Chronic Lymphocytic Leukemia
Cited by: 16
Author(s): Lidia Karabon, Anna Partyka, Monika Jasek, Ewa Lech-Maranda, Olga Grzybowska‐Izydorczyk, Agnieszka Bojarska‐Junak, Edyta Pawlak, Anna Tomkiewicz, Tadeusz Robak, Jacek Roliński, Irena Frydecka
Software Mentions: 1
Published: almost 8 years ago

10.1186/s12859-020-03876-w

Genome-wide detection of short tandem repeat expansions by long-read sequencing
Cited by: 9
Author(s): Qian Liu, Yao Tong, Kai Wang
Software Mentions: 1
Published: almost 4 years ago

10.1186/s12859-018-2281-4

De novo assembly of bacterial genomes with repetitive DNA regions by dnaasm application
Cited by: 14
Author(s): Wiktor Kuśmirek, Robert Nowak
Software Mentions: 1
Published: over 6 years ago

10.1186/1471-2105-6-162

Theme discovery from gene lists for identification and viewing of multiple functional groups
Cited by: 51
Author(s): Petri Pehkonen, Garry Wong, Petri Törönen
Software Mentions: 1
Published: over 19 years ago

10.1186/1471-213X-11-30

The zebrafish transcriptome during early development
Cited by: 111
Author(s): Liselotte Vesterlund, Hong Jiao, Per Unneberg, Outi Hovatta, Juha Kere
Software Mentions: 1
Published: over 13 years ago

10.1186/s12862-019-1530-0

Cooperative evolution of two different TEs results in lineage-specific novel transcripts in the BLOC1S2 gene
Cited by: 2
Author(s): Hyeon-Mu Cho, Sang Je Park, Se-Hee Choe, Ja-Rang Lee, Sun-Uk Kim, Yeung Bae Jin, Sang-Rae Lee, Younghyun Kim, Jae Won Huh
Software Mentions: 1
Published: about 5 years ago

10.1186/1471-2148-9-97

Identification, distribution and molecular evolution of the pacifastin gene family in Metazoa
Cited by: 17
Author(s): Bert Breugelmans, Gert Simonet, Vincent van Hoef, Sofie Van Soest, Jozef Vanden Broeck
Software Mentions: 1
Published: almost 16 years ago

10.1186/1471-2156-10-89

The powdery mildew resistance gene REN1 co-segregates with an NBS-LRR gene cluster in two Central Asian grapevines
Cited by: 82
Author(s): Courtney Coleman, Dario Copetti, G. Cipriáni, S. Hoffmann, P. Kozma, László Kovács, Michèle Morgante, R. Testolin, Gabriele Di Gaspero
Software Mentions: 1
Published: almost 15 years ago

10.1186/1471-2164-15-975

Structure and decay of a proto-Y region in Tilapia, Oreochromis niloticus
Cited by: 47
Author(s): William J Gammerdinger, Matthew A. Conte, Enoch A Acquah, Reade B. Roberts, Thomas D. Kocher
Software Mentions: 1
Published: about 10 years ago

10.1186/1471-2164-14-695

Histoplasma yeast and mycelial transcriptomes reveal pathogenic-phase and lineage-specific gene expression profiles
Cited by: 48
Author(s): Jessica A. Edwards, Chenxi Chen, Megan M. Kemski, Jinnan Hu, Thomas K. Mitchell, Chad A. Rappleye
Software Mentions: 1
Published: about 11 years ago

10.1186/1471-2164-14-677

Isolation, characterization and comparative genomics of bacteriophage SfIV: a novel serotype converting phage from Shigella flexneri
Cited by: 25
Author(s): Richa Jakhetia, Kaisar A. Talukder, Naresh K. Verma
Software Mentions: 1
Published: about 11 years ago

10.1186/1471-2164-11-387

Whole-genome in-silico subtractive hybridization (WISH) - using massive sequencing for the identification of unique and repetitive sex-specific sequences: the example of Schistosoma mansoni
Cited by: 23
Author(s): Julien Portela, Christoph Grunau, Céline Cosseau, Sophie Beltran‐Bech, Christelle Le Dantec, Hugues Parrinello, Jérôme Boissier
Software Mentions: 1
Published: over 14 years ago

10.1186/s12864-018-5084-0

Phylogenetic, comparative genomic and structural analyses of human Streptococcus agalactiae ST485 in China
Cited by: 6
Author(s): Rui Wang, Liping Li, Ting Huang, Yan Huang, Weiyi Huang, Xiaoyan Yang, Aiying Lei, Ming Chen
Software Mentions: 1
Published: about 6 years ago

10.1186/1471-2164-15-663

Motif depletion in bacteriophages infecting hosts with CRISPR systems
Cited by: 9
Author(s): Anne Kupczok, Jonathan P. Bollback
Software Mentions: 1
Published: almost 11 years ago

10.1186/s12864-020-06912-4

Transcriptome-based selection and validation of optimal house-keeping genes for skin research in goats (Capra hircus)
Cited by: 11
Author(s): Jipan Zhang, Chengchen Deng, Jialu Li, Yongju Zhao
Software Mentions: 1
Published: over 4 years ago

10.1186/1471-2164-13-430

Analysis of a comprehensive dataset of diversity generating retroelements generated by the program DiGReF
Cited by: 24
Author(s): Thomas Schillinger, Mohamed Lisfi, Jingyun Chi, John Cullum, Nora Zingler
Software Mentions: 1
Published: about 12 years ago

10.1186/1471-2164-11-661

Identification of genes for small non-coding RNAs that belong to the regulon of the two-component regulatory system CiaRH in Streptococcus
Cited by: 44
Author(s): Patrick Marx, Michael Nuhn, Márta Kovács, Regine Hakenbeck, Reinhold Brückner
Software Mentions: 1
Published: almost 14 years ago

10.1186/1471-2164-15-1135

Comparative genomic analysis of clinical and environmental strains provides insight into the pathogenicity and evolution of Vibrio parahaemolyticus
Cited by: 18
Author(s): Lei Li, Hin-Chung Wong, Wenyan Nong, Man Kit Cheung, Patrick Tik Wan Law, Kai Man Kam, Hoi Shan Kwan
Software Mentions: 1
Published: almost 10 years ago

10.1186/s12864-020-06813-6

Genomic and transcriptomic survey of an endophytic fungus Calcarisporium arbuscula NRRL 3705 and potential overview of its secondary metabolites
Cited by: 16
Author(s): Jintao Cheng, Fei Cao, Xin-Ai Chen, Yongquan Li, Xu‐Ming Mao
Software Mentions: 1
Published: over 4 years ago

10.1186/1471-2164-9-149

Losing helena: The extinction of a drosophila line-like element
Cited by: 15
Author(s): Rita Rebollo, Emmanuelle Lerat, Liliana López Kleine, Christian Biémont, Cristina Vieira
Software Mentions: 1
Published: over 16 years ago

10.1186/s12864-016-3358-y

Comprehensive analysis of draft genomes of two closely related pseudomonas syringae phylogroup 2b strains infecting mono- and dicotyledon host plants
Cited by: 7
Author(s): Rinat Sultanov, Georgij Arapidi, С. В. Виноградова, Vadim M. Govorun, Duglas G. Luster, А. Н. Игнатов
Software Mentions: 1
Published: almost 8 years ago

10.1186/s12866-018-1152-5

Metagenomic analysis of microbial community and function involved in cd-contaminated soil
Cited by: 139
Author(s): Gang Feng, Tian Xie, Xin Wang, Jiuyuan Bai, Lin Tang, Hai Zhao, Wei Wei, Maolin Wang, Yun Zhao
Software Mentions: 1
Published: almost 7 years ago

10.1186/1471-2180-9-262

Molecular and biochemical characterization of urease and survival of Yersinia enterocolitica biovar 1A in acidic pH in vitro
Cited by: 22
Author(s): Neeru Bhagat, Jugsharan Singh Virdi
Software Mentions: 1
Published: almost 16 years ago

10.1186/1471-2229-12-134

CrMPK3, a mitogen activated protein kinase from Catharanthus roseusand its possible role in stress induced biosynthesis of monoterpenoid indole alkaloids
Cited by: 67
Author(s): Susheel Kumar Raina, Dhammaprakash Pandhari Wankhede, Monika Jäggi, Pallavi Singh, Siddhi Kashinath Jalmi, Raghuram Badmi, Arsheed Hussain Sheikh, Alok Sinha
Software Mentions: 1
Published: over 12 years ago

10.1186/1471-2229-13-126

Molecular cloning and characterisation of SlAGOfamily in tomato
Cited by: 19
Author(s): Zhiqiang Xian, Yingwu Yang, Wei Huang, Ning Tang, Xinyu Wang, Zhengguo Li
Software Mentions: 1
Published: about 11 years ago

10.1186/s12870-020-02767-9

Genome-wide identification and characterization of COMT gene family during the development of blueberry fruit
Cited by: 16
Author(s): Yushan Liu, Yizhou Wang, Jiabo Pei, Yadong Li, Haiyue Sun
Software Mentions: 1
Published: almost 4 years ago

10.1186/s12900-018-0084-5

Structure activity relationship (SAR) and quantitative structure activity relationship (QSAR) studies showed plant flavonoids as potential inhibitors of dengue NS2B-NS3 protease
Cited by: 35
Author(s): Muhammad Waseem Sarwar, Adeel Riaz, Syed Muhammad Raihan Dilshad, Ahmed Al‐Qahtani, Muhammad Shah Nawaz-ul-Rehman, Muhammad Mubin
Software Mentions: 1
Published: over 6 years ago

10.1186/s12917-020-02289-4

A molecular survey, whole genome sequencing and phylogenetic analysis of astroviruses from roe deer
Cited by: 3
Author(s): Urška Jamnikar-Ciglenečki, Vita Civnik, Andrej Kirbiš, Urška Kuhar
Software Mentions: 1
Published: over 4 years ago

10.1186/s12917-019-1936-3

Genome sequence analysis reveals potential for virulence genes and multi-drug resistance in an Enterococcus faecalis 2A (XJ05) strain that causes lamb encephalitis
Cited by: 4
Author(s): Yingjin Chai, Xiaoqiong Gu, Qin Wu, Guo Bingjiao, Yayin Qi, Xiaolan Wang, Xueping Zhou, Jie Li, Mengli Han, Fagang Zhong
Software Mentions: 1
Published: over 5 years ago

10.3762/bjoc.15.276

Palladium-catalyzed synthesis and nucleotide pyrophosphatase inhibition of benzo[4,5]furo[3,2-b]indoles
Cited by: 3
Author(s): Hoang Huy, Saif Ullah, Alexander Villinger, Joanna Lecka, Jean Sévigny, Peter Ehlers, Jamshed Iqbal, Peter Langer
Software Mentions: 1
Published: almost 5 years ago

10.1093/bioinformatics/btz703

Proteome-level assessment of origin, prevalence and function of leucine-aspartic acid (LD) motifs
Cited by: 10
Author(s): Tanvir Alam, Meshari Alazmi, Rayan Naser, Franceline Huser, Afaque Ahmad Imtiyaz Momin, Veronica Astro, Seungbeom Hong, Katarzyna Walkiewicz, Christian G. Canlas, Raphaël Huser, Amal J. Ali, Jasmeen S. Merzaban, Antonio Adamo, Mariusz Jaremko, Łukasz Jaremko, Vladimir B. Bajić, Xin Gao, Stefan T. Arold
Software Mentions: 1
Published: about 5 years ago

10.1093/bioinformatics/btx500

EMHP: an accurate automated hole masking algorithm for single-particle cryo-EM image processing
Cited by: 26
Author(s): Zachary T. Berndsen, Charles A. Bowman, Haerin Jang, Andrew B. Ward
Software Mentions: 1
Published: over 7 years ago

10.1186/1745-6150-9-19

Mycobacteriophage-drived diversification of Mycobacterium abscessus
Cited by: 16
Author(s): Mohamed Sassi, Philippe Gouret, Olivier Chabrol, Pierre Pontarotti, Michel Drancourt
Software Mentions: 1
Published: about 10 years ago

10.1155/2020/1824183

Genome Survey and Transcriptome Analysis on Mycelia and Primordia of Agaricus blazei
Cited by: 7
Author(s): Yuanping Lu, Liao JianHua, Zhiyong Guo, Z. Y. Cai, Meiyuan Chen
Software Mentions: 1
Published: almost 5 years ago

10.1155/2015/485624

Targeted Next Generation Sequencing Identifies Novel Mutations inRP1as a Relatively Common Cause of Autosomal Recessive Rod-Cone Dystrophy
Cited by: 23
Author(s): Said El Shamieh, Élise Boulanger-Scemama, Marie‐Elise Lancelot, Antonio Arnaiz‐Villena, Vanessa Démontant, Christel Condroyer, Mélanie Letexier, Jean‐Paul Saraiva, Saddek Mohand‐Saïd, José‐Alain Sahel, Isabelle Audo, Christina Zeitz
Software Mentions: 1
Published: almost 10 years ago

10.1155/2021/5515692

In Silico Drug Screening Analysis against the Overexpression of PGAM1 Gene in Different Cancer Treatments
Cited by: 6
Author(s): Muhammad Mazhar Fareed, Mohamed A. El‐Esawi, Enas M. El-Ballat, Gaber El‐Saber Batiha, Abdur Rauf, Fatma M. El‐Demerdash, Fahad A. Alhumaydhi, Suliman A. Alsagaby
Software Mentions: 1
Published: over 3 years ago

10.1042/BSR20181156

Hemin induces autophagy in a leukemic erythroblast cell line through the LRP1 receptor
Cited by: 13
Author(s): Rubén Adrián Grosso, Paula Virginia Subirada Caldarone, Marı́a C. Sánchez, Gustavo A. Chiabrando, María Isabel Colombo, Claudio Marcelo Fader
Software Mentions: 1
Published: almost 6 years ago

10.1186/s12935-018-0522-2

Unique CD44 intronic SNP is associated with tumor grade in breast cancer: a case control study and in silico analysis
Cited by: 5
Author(s): Rezvan Esmaeili, Nasrin Abdoli, Fatemeh Yadegari, Mohamadreza Neishaboury, Leila Farahmand, Ahmad Kaviani, Keivan Majidzadeh‐A
Software Mentions: 1
Published: over 6 years ago

10.1002/cam4.2338

Circular RNA screening from EIF3a in lung cancer
Cited by: 15
Author(s): Ma-Sha Huang, Fuqiang Yuan, Yang Gao, Junyan Liu, Yixin Chen, Chenjing Wang, Ben He, Hong‐Hao Zhou, Zhao‐Qian Liu
Software Mentions: 1
Published: over 5 years ago

10.1097/MD.0000000000015692

Identification of pathogenic mutations in 6 Chinese families with multiple exostoses by whole-exome sequencing and multiplex ligation-dependent probe amplification
Cited by: 2
Author(s): Xigui Long, Zhuo Li, Yanru Huang, Li Zhang, Weigang Lv, Yuanwen Teng, Siyuan Linpeng, Desheng Liang, Lingqian Wu
Software Mentions: 1
Published: over 5 years ago

10.1016/j.mex.2019.05.002

Identification Acroporidae and Favidae by a newly approach called Reef Identification Knowhow Application-Reconstructed by 3D Imagery (RIKA-R3DI) Method
Cited by: 1
Author(s): Rika Kurniawan, Aprilia Ariestasari, Roiko Sunarwan Silalahi, Ita Karlina, Try Febrianto, Dedy Kurniawan, Viktor Amrifo, Muhammad Abrar, Agung Dhamar Syakti
Software Mentions: 1
Published: almost 6 years ago

10.1264/jsme2.ME16106

A Thermostable Bilirubin-Oxidizing Enzyme from Activated Sludge Isolated by a Metagenomic Approach
Cited by: 12
Author(s): Nobutada Kimura, Yoichi Kamagata
Software Mentions: 1
Published: almost 9 years ago

10.1099/mgen.0.000577

Insights into evolution and coexistence of the colibactin- and yersiniabactin secondary metabolite determinants in enterobacterial populations
Cited by: 12
Author(s): Haleluya Wami, Alexander Wallenstein, Daniel Sauer, Monika Stoll, Rudolf von Bünau, Éric Oswald, Rolf Müller, Ulrich Dobrindt
Software Mentions: 1
Published: over 3 years ago

10.1128/MRA.00931-19

Nearly Complete Genome Sequences of Two Bovine Viral Diarrhea Virus Isolates, Subtype 1f Strain SLO/1170/2000 and Subtype 1d Strain SLO/2416/2002
Cited by: 0
Author(s): Ivan Toplak, Danijela Rihtarič, Jože Grom, Nataša Toplak, Urška Kuhar
Software Mentions: 1
Published: about 5 years ago

10.1128/MRA.00241-21

Complete Genome Sequence of Matlo Bat Lyssavirus
Cited by: 5
Author(s): Colyn S. Grobler, Jessica Coertse, Wanda Markotter
Software Mentions: 1
Published: over 3 years ago

10.1080/23802359.2019.1689859

The complete mitochondrial genome and phylogenetic analysis of Cancer pagurus (Decapoda, Cancridae)
Cited by: 1
Author(s): Sigang Fan, Chao Zhao, Pengfei Wang, Lulu Yan, Lihua Qiu
Software Mentions: 1
Published: over 5 years ago

10.1080/23802359.2019.1691474

The complete mitochondrial genome and phylogenetic analysis of Cancer magister (Decapoda, Cancridae)
Cited by: 1
Author(s): Sigang Fan, Chao Zhao, Pengfei Wang, Lulu Yan, Lihua Qiu
Software Mentions: 1
Published: over 5 years ago

10.1186/1759-8753-4-21

Transposable element evolution in Heliconius suggests genome diversity within Lepidoptera
Cited by: 50
Author(s): Christine A. Lavoie, Roy N. Platt, Peter A. Novick, Brian A. Counterman, David A. Ray
Software Mentions: 1
Published: about 11 years ago

10.3390/molecules24213915

Cloning and Characterization of a Cold-adapted Chitosanase from Marine Bacterium Bacillus sp. BY01
Cited by: 21
Author(s): Yue Yang, Zhou Zheng, Yifei Xiao, Jiaojiao Zhang, Yu Zhou, Li Xiao, Shangyong Li, Hai Yu
Software Mentions: 1
Published: about 5 years ago

10.1038/s41385-021-00418-2

Growth faltering regardless of chronic diarrhea is associated with mucosal immune dysfunction and microbial dysbiosis in the gut lumen
Cited by: 15
Author(s): Nicholas S Rhoades, Sara M Hendrickson, Kamm Prongay, Andrew J Haertel, Leanne Gill, Robert A. Edwards, Laura Garzel, Mark K. Slifka, Ilhem Messaoudi
Software Mentions: 1
Published: about 3 years ago

10.3109/03009734.2012.669423

Total-tau in cerebrospinal fluid of patients with multiple sclerosis decreases in secondary progressive stage of disease and reflects degree of brain atrophy
Cited by: 30
Author(s): Jacek Jaworski, Marek Psujek, Marzena Janczarek, Małgorzata Szczerbo-Trojanowska, Halina Bartosik-Psujek
Software Mentions: 1
Published: over 12 years ago

10.3390/v6031454

A Role for CD81 and Hepatitis C Virus in Hepatoma Mobility
Cited by: 11
Author(s): Claire L. Brimacombe, Garrick K. Wilson, Stefan G. Hübscher, Jane A. McKeating, Michelle J. Farquhar
Software Mentions: 1
Published: over 10 years ago

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