Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: pypi: fastphase
https://packages.ecosyste.ms/registries/pypi.org/packages/fastphase
Python implementation of the fastPHASE model
15 versions
Latest release: over 1 year ago
58 downloads last month
Papers Mentioning fastphase 14
10.7554/eLife.54462
The evolutionary history and genomics of European blackcap migrationCited by: 39
Author(s): Kira E. Delmore, Juan Carlos Illera, Javier Pérez‐Tris, Gernot Segelbacher, Juan Sebastian Lugo Ramos, Gillian Durieux, Jun Ishigohoka, Miriam Liedvogel
Software Mentions: 4
Published: over 4 years ago
10.1186/s12864-015-1384-9
Genome-wide analysis reveals population structure and selection in Chinese indigenous sheep breedsCited by: 108
Author(s): Caihong Wei, Huihua Wang, Gang Liu, Mingming Wu, Jiaxve Cao, Zhen Liu, Ruizao Liu, Fuping Zhao, Li Zhang, Jian Lü, Chousheng Liu, Lixin Du
Software Mentions: 3
Published: over 9 years ago
10.1371/journal.pone.0129967
The Relationship between Runs of Homozygosity and Inbreeding in Jersey Cattle under SelectionCited by: 66
Author(s): Eui-Soo Kim, Tad S. Sonstegard, Curtis P. Van Tassell, G.R. Wiggans, Max F. Rothschild
Software Mentions: 2
Published: over 9 years ago
10.1186/1471-2105-11-65
Haplotype allelic classes for detecting ongoing positive selectionCited by: 17
Author(s): Julie Hussin, Philippe Nadeau, Jean‐François Lefebvre, Damian Labuda
Software Mentions: 2
Published: almost 15 years ago
10.1186/1752-0509-6-S2-S11
Phenotype prediction from genome-wide association studies: application to smoking behaviorsCited by: 6
Author(s): Dankyu Yoon, Young Jin Kim, Taesung Park
Software Mentions: 1
Published: almost 12 years ago
10.1111/j.1365-2052.2012.02323.x
Genome‐wide association analysis for quantitative trait loci influencing <scp>W</scp>arner–<scp>B</scp>ratzler shear force in five taurine cattle breedsCited by: 64
Author(s): Matthew McClure, Holly R. Ramey, Megan M Rolf, Stephanie McKay, Jared E. Decker, Richard H. Chapple, J. W. Kim, Tasia M. Taxis, R. L. Weaber, Robert D. Schnabel, Jeremy F. Taylor
Software Mentions: 1
Published: over 12 years ago
10.1371/journal.pgen.1003588
Alu Elements in ANRIL Non-Coding RNA at Chromosome 9p21 Modulate Atherogenic Cell Functions through Trans-Regulation of Gene NetworksCited by: 322
Author(s): Lesca M. Holdt, Steve Hoffmann, Kristina Sass, David Langenberger, Markus Scholz, Knut Krohn, Knut Finstermeier, Anika Stahringer, Wolfgang Wilfert, Frank Beutner, Stephan Gielen, Gerhard Schuler, Gábor Gäbel, H. Bergert, Ingo Bechmann, Peter F. Stadler, Joachim Thiery, Daniel Teupser
Software Mentions: 1
Published: over 11 years ago
10.1371/journal.pone.0036133
A Quasi-Exclusive European Ancestry in the Senepol Tropical Cattle Breed Highlights the Importance of the slick Locus in Tropical AdaptationCited by: 46
Author(s): Laurence Flori, Mary Isabel Gonzatti, Sophie Thévenon, Isabelle Chantal, J. R. Pinto, David Berthier, Pedro María Aso, Mathieu Gautier
Software Mentions: 1
Published: over 12 years ago
10.3389/fgene.2013.00176
Imputation of microsatellite alleles from dense SNP genotypes for parentage verification across multiple Bos taurus and Bos indicus breedsCited by: 22
Author(s): Matthew McClure, Tad S. Sonstegard, G.R. Wiggans, Alison L. Van Eenennaam, Kristina Weber, M. C. T. Penedo, D.P. Berry, John Flynn, José Fernando Garcia, Adriana Santana do Carmo, Luciana Correia de Almeida Regitano, Milla Albuquerque, Marcos V. G. B. Silva, M. A. Machado, M.P. Coffey, Moore Kl, M. Y. Boscher, Lucie Genestout, Raffaele Mazza, Jeremy F. Taylor, Robert D. Schnabel, Bob Simpson, Elisa Marques, John C. McEwan, A.R. Cromie, Luiz Lehmann Coutinho, L. A. Kuehn, J. W. Keele, E.K. Piper, Jim Cook, Robert W. Williams, Curtis P. Van Tassell
Software Mentions: 1
Published: almost 12 years ago
10.1038/srep26770
Genome-wide analysis reveals adaptation to high altitudes in Tibetan sheepCited by: 86
Author(s): Caihong Wei, Huihua Wang, Gang Liu, Fuping Zhao, James W. Kijas, Youji Ma, Jian Lü, Li Zhang, Jiaxue Cao, Mingming Wu, Guangkai Wang, Ruizao Liu, Zhen Liu, Shuzhen Zhang, Chousheng Liu, Lixin Du
Software Mentions: 1
Published: over 8 years ago
10.1371/journal.pgen.1002891
Genome Patterns of Selection and Introgression of Haplotypes in Natural Populations of the House Mouse (Mus musculus)Cited by: 135
Author(s): Fabian Staubach, Anna Lorenc, Philipp W. Messer, Kun Tang, Dmitri A. Petrov, Diethard Tautz
Software Mentions: 1
Published: about 12 years ago
10.3390/ani10101905
Genetic Signatures of Selection for Cashmere Traits in Chinese GoatsCited by: 19
Author(s): Meilin Jin, Jian Lü, Xiaojuan Fei, Zengkui Lu, Kai Quan, Yongbin Liu, Mingxing Chu, Ran Di, Huihua Wang, Caihong Wei
Software Mentions: 1
Published: about 4 years ago
10.1186/s12864-015-1500-x
Recent artificial selection in U.S. Jersey cattle impacts autozygosity levels of specific genomic regionsCited by: 21
Author(s): Eui-Soo Kim, Tad S. Sonstegard, Max F. Rothschild
Software Mentions: 1
Published: over 9 years ago
10.1186/1471-2164-13-538
Strategies and utility of imputed SNP genotypes for genomic analysis in dairy cattleCited by: 75
Author(s): Mehar S. Khatkar, G. Moser, Ben J. Hayes, Herman W. Raadsma
Software Mentions: 1
Published: almost 13 years ago