pypi: excel | Projects | Ecosyste.ms: Papers

10.1186/1471-2407-9-396

An informatics supported web-based data annotation and query tool to expedite translational research for head and neck malignancies
Cited by: 12
Author(s): Waqas Amin, Hyunseok P. Kang, Ann Marie Egloff, Harpreet Singh, Kerry Trent, Jennifer Ridge-Hetrick, Raja R. Seethala, Jennifer R. Grandis, Anil V. Parwani
Software Mentions: 4
Published: almost 17 years ago

10.1371/journal.pone.0237397

Spatial heterogeneity of coral reef benthic communities in Kenya
Cited by: 5
Author(s): Juliet Karisa, David Obura, Chaolun Allen Chen
Software Mentions: 4
Published: about 6 years ago

10.1371/journal.pone.0245222

Early Holocene Scandinavian foragers on a journey to affluence: Mesolithic fish exploitation, seasonal abundance and storage investigated through strontium isotope ratios by laser ablation (LA‐MC-ICP‐MS)
Cited by: 9
Author(s): Adam Boëthius, Mathilda Kjällquist, Melanie Kielman‐Schmitt, Torbjörn Ahlström, Lars Larsson
Software Mentions: 4
Published: over 5 years ago

10.1038/s41598-017-18756-2

Metagenomic and metabolomic analyses unveil dysbiosis of gut microbiota in chronic heart failure patients
Cited by: 199
Author(s): Xiaojie Cui, Lei Ye, Jing Li, Ling Jin, Wenjie Wang, Shuangyue Li, Minghui Bao, Shouling Wu, Lifeng Li, Bin Geng, Xin Zhou, Jian Zhang, Jun Cai
Software Mentions: 4
Published: over 8 years ago

10.1371/journal.pone.0124671

From Benchtop to Desktop: Important Considerations when Designing Amplicon Sequencing Workflows
Cited by: 158
Author(s): Dáithí C. Murray, Megan L. Coghlan, Michael Bunce
Software Mentions: 4
Published: over 11 years ago

10.1371/journal.pgen.1006879

Open chromatin profiling identifies AP1 as a transcriptional regulator in oesophageal adenocarcinoma
Cited by: 40
Author(s): Edward Britton, Connor Rogerson, Shaveta Mehta, Yaoyong Li, Xiaodun Li, Rebecca C. Fitzgerald, Yeng Ang, Andrew D Sharrocks
Software Mentions: 4
Published: about 9 years ago

10.1038/s41598-018-34855-0

Safranal induces DNA double-strand breakage and ER-stress-mediated cell death in hepatocellular carcinoma cells
Cited by: 75
Author(s): Ala’a Al-Hrout, Amphun Chaiboonchoe, Basel Khraiwesh, Chandraprabha Murali, Badriya Baig, Raafat El‐Awady, Hamadeh Tarazi, Amnah Alzahmi, David R. Nelson, Yaser E. Greish, Wafaa Ramadan, Kourosh Salehi‐Ashtiani, Amr Amin
Software Mentions: 4
Published: almost 8 years ago

10.1186/1758-2946-4-28

Effects of multiple conformers per compound upon 3-D similarity search and bioassay data analysis
Cited by: 16
Author(s): Sunghwan Kim, Evan Bolton, Stephen H. Bryant
Software Mentions: 4
Published: almost 14 years ago

10.1038/s41598-019-45724-9

Enrichment of intestinal Lactobacillus by enhanced secretory IgA coating alters glucose homeostasis in P2rx7−/− mice
Cited by: 18
Author(s): Lisa Perruzza, Francesco Strati, Giorgio Gargari, Anna Maria D’Erchia, Bruno Fosso, Graziano Pesole, Simone Guglielmetti, Fabio Grassi
Software Mentions: 4
Published: over 7 years ago

10.1042/BSR20194459

GPNMB contributes to a vicious circle for chronic obstructive pulmonary disease
Cited by: 1
Author(s): Xijuan Zhang, Zhong‐hua Cui, Yan Dong, Xiuwen Liang, Yanxin Zhao, Ancha Baranova, Hongbao Cao, Ling Wang
Software Mentions: 4
Published: over 6 years ago

10.1371/journal.pone.0034534

MicroRNA Dysregulation in the Spinal Cord following Traumatic Injury
Cited by: 113
Author(s): Mónica Yunta, Manuel Nieto‐Díaz, Francisco J. Esteban, Marcos Caballero-López, Rosa Navarro-Ruíz, David Reigada, D. Wolfgang Pita-Thomas, Ángela del Águila, Teresa Muñoz‐Galdeano, Rodrigo M. Maza
Software Mentions: 4
Published: over 14 years ago

10.1038/srep26846

Transcriptome analysis of human ageing in male skin shows mid-life period of variability and central role of NF-κB
Cited by: 48
Author(s): Daniel Haustead, Andrew Stevenson, Vishal Saxena, Fiona Marriage, Martin J Firth, Robyn C Silla, Lisa W. Martin, Katharine F. Adcroft, Suzanne Rea, Philip J. Day, Phillip E. Melton, Fiona Wood, Mark W. Fear
Software Mentions: 4
Published: over 10 years ago

10.3390/proteomes9020028

Advanced Fiber Type-Specific Protein Profiles Derived from Adult Murine Skeletal Muscle
Cited by: 10
Author(s): Britta Eggers, Karin Schork, Michael Turewicz, Katalin Barkovits, Martin Eisenacher, Rolf Schröder, Christoph S. Clemen, Katrin Marcus
Software Mentions: 4
Published: over 5 years ago

10.3389/fimmu.2020.608895

Gentamicin Induced Microbiome Adaptations Associate With Increased BCAA Levels and Enhance Severity of Influenza Infection
Cited by: 6
Author(s): Ye Sun, Zi He, Jiajia Li, Saisai Gong, Shunzong Yuan, Tao Li, Nianzhi Ning, Xing Li, Liangyan Zhang, Fanghong Chen, Li Zhan, Jianxin Wang, Di Luo, Hui Wang
Software Mentions: 4
Published: over 5 years ago

10.1371/journal.pone.0236728

The prevalence of psychiatric symptoms before the diagnosis of Parkinson’s disease in a nationwide cohort: A comparison to patients with cerebral infarction
Cited by: 9
Author(s): Szabolcs Szatmári, András Ajtay, Ferenc Oberfrank, Balázs Dobi, Dániel Bereczki
Software Mentions: 4
Published: about 6 years ago

10.1038/srep23518

The chemosensory receptors of codling moth Cydia pomonella–expression in larvae and adults
Cited by: 46
Author(s): William B. Walker, Francisco Gonzalez, Stephen F. Garczynski, Peter Witzgall
Software Mentions: 4
Published: over 10 years ago

10.1371/journal.pone.0185207

Escape Excel: A tool for preventing gene symbol and accession conversion errors
Cited by: 8
Author(s): Eric A. Welsh, Paul A. Stewart, Brent M. Kuenzi, James A. Eschrich
Software Mentions: 4
Published: almost 9 years ago

10.1371/journal.pone.0093846

The SLE Transcriptome Exhibits Evidence of Chronic Endotoxin Exposure and Has Widespread Dysregulation of Non-Coding and Coding RNAs
Cited by: 104
Author(s): Lei Shi, Zhe Zhang, Angela M Yu, Wei Wang, Zhi Wei, Ehtisham Akhter, Kelly Maurer, Patrícia Costa-Reis, Li Song, Michelle Petri, Kathleen E. Sullivan
Software Mentions: 4
Published: over 12 years ago

10.1016/j.molcel.2018.09.023

Phosphorylation of Histone H4T80 Triggers DNA Damage Checkpoint Recovery
Cited by: 20
Author(s): Gonzalo Millán-Zambrano, Helena Santos‐Rosa, Fabio Puddu, Samuel Robson, Stephen Jackson, Tony Kouzarides
Software Mentions: 4
Published: almost 8 years ago

10.1080/21505594.2021.1958057

Transcriptional response of Aspergillus fumigatus to copper and the role of the Cu chaperones
Cited by: 6
Author(s): Duaa Anabosi, Zohar Meir, Yana Shadkchan, Mariana Handelman, Ammar Abou-Kandil, Annie Yap, Daniel Urlings, Morgan Gold, Sven Krappmann, Hubertus Haas, Nir Osherov
Software Mentions: 4
Published: about 5 years ago

10.3389/fmicb.2017.00548

Transcriptomic and Metabolomics Profiling of Phage–Host Interactions between Phage PaP1 and Pseudomonas aeruginosa
Cited by: 26
Author(s): Xia Zhao, Mengyu Shen, Xingyu Jiang, Wei Shen, Qian Zhong, Yuhui Yang, Yinling Tan, Melissa Agnello, Xuesong He, Fuquan Hu, Shuai Le
Software Mentions: 4
Published: over 9 years ago

10.1371/journal.pone.0141225

A catalogue of novel bovine long noncoding RNA across 18 tissues
Cited by: 76
Author(s): Lambros T. Koufariotis, Yi‐Ping Phoebe Chen, Amanda J. Chamberlain, Christy Vander Jagt, Ben J. Hayes
Software Mentions: 4
Published: almost 11 years ago

10.1111/mec.14084

Divergence of annual and perennial species in the Brassicaceae and the contribution of cis-acting variation atFLCorthologues
Cited by: 58
Author(s): Christiane Kiefer, Edouard Severing, Robert Karl, Sara Bergonzi, Marcus A. Koch, Achim Tresch, George Coupland
Software Mentions: 4
Published: over 9 years ago

10.1186/s12943-018-0833-x

RNA-Seq profiling of circular RNAs in human laryngeal squamous cell carcinomas
Cited by: 57
Author(s): Cheng Hsien Lu, Xi Su, Amanda Y. Wang, Tao Yuan, Zhenxiao Wang, Chaoping Huang, Yuehua Qiao, Hongyi Hu, Liangfa Liu
Software Mentions: 4
Published: over 8 years ago

10.1371/journal.pone.0159177

Immunophenotypic and Ultrastructural Analysis of Mast Cells in Hermansky-Pudlak Syndrome Type-1: A Possible Connection to Pulmonary Fibrosis
Cited by: 11
Author(s): Arnold S. Kirshenbaum, Glenn Cruse, Avanti Desai, Geethani Bandara, Maarten Leerkes, Chyi‐Chia Richard Lee, Elizabeth R. Fischer, Kevin O’Brien, Bernadette R. Gochuico, Kelly D. Stone, William A. Gahl, Dean D. Metcalfe
Software Mentions: 3
Published: about 10 years ago

10.1371/journal.pone.0253615

Electronic patient-reported outcome measures using mobile health technology in rheumatology: A scoping review
Cited by: 8
Author(s): Jaclyn Shelton, Sierra Casey, Nathan Puhl, Jeanette Buckingham, Elaine Yacyshyn
Software Mentions: 3
Published: about 5 years ago

10.1371/journal.pone.0254426

Constitutive activation of NF-κB inducing kinase (NIK) in the mesenchymal lineage using Osterix (Sp7)- or Fibroblast-specific protein 1 (S100a4)-Cre drives spontaneous soft tissue sarcoma
Cited by: 2
Author(s): Jennifer L. Davis, Roman Thaler, Linda Cox, Biancamaria Ricci, Heather M. Zannit, Fei Wan, Roberta Faccio, Amel Dudakovic, André J. van Wijnen, Deborah J. Veis
Software Mentions: 3
Published: about 5 years ago

10.1371/journal.pone.0249877

Comprehensive approach to HIV/AIDS testing and linkage to treatment among men who have sex with men in Curitiba, Brazil
Cited by: 2
Author(s): Marly Marques da Cruz, Vanda Lúcia Cota, Nena Lentini, Trista Bingham, Gregory Parent, Solange Kanso, Liza Regina Bueno Rosso, Bernardo Machado De Almeida, Raquel Maria Cardoso Torres, Cristiane Yumi Nakamura, Ana Carolina Faria e Silva Santelli
Software Mentions: 3
Published: over 5 years ago

10.1186/s13002-021-00432-5

What interferes with conducting free lists? A comparative ethnobotanical experiment
Cited by: 4
Author(s): Melise Pessôa Araujo Meireles, Ulysses Paulino Albuquerque, Patrícia Muniz de Medeiros
Software Mentions: 3
Published: over 5 years ago

10.3390/molecules23112954

Molecular Modeling and In Vitro Studies of a Neutral Oxime as a Potential Reactivator for Acetylcholinesterase Inhibited by Paraoxon
Cited by: 15
Author(s): Reuel L. de Paula, Joyce S. F. D. de Almeida, Samir F. A. Cavalcante, Arlan da Silva Gonçalves, Alessandro B. C. Simas, Tanos C. C. França, Martin Vališ, Kamil Kuča, Eugenie Nepovimová, José Mauro Granjeiro
Software Mentions: 3
Published: almost 8 years ago

10.1371/journal.pone.0248687

Lost to follow-up and associated factors among patients with drug resistant tuberculosis in Ethiopia: A systematic review and meta-analysis
Cited by: 8
Author(s): Assefa Andargie, Asressie Molla Tessema, Fentaw Tadese, Segenet Zewdie
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0114406

An Integrated Approach for Platoon-based Simulation and Its Feasibility Assessment
Cited by: 7
Author(s): Kok Mun Ng, Mamun Bin Ibne Reaz
Software Mentions: 3
Published: over 11 years ago

10.1371/journal.ppat.1008803

Closely related reovirus lab strains induce opposite expression of RIG-I/IFN-dependent versus -independent host genes, via mechanisms of slow replication versus polymorphisms in dsRNA binding σ3 respectively
Cited by: 17
Author(s): Adil Mohamed, Prathyusha Konda, Heather E. Eaton, Shashi Gujar, James R. Smiley, Maya Shmulevitz
Software Mentions: 3
Published: about 6 years ago

10.3389/fmicb.2018.01926

Endophytic Bacterial Community Structure and Function of Herbaceous Plants From Petroleum Hydrocarbon Contaminated and Non-contaminated Sites
Cited by: 20
Author(s): Rhea Lumactud, Roberta R. Fulthorpe
Software Mentions: 3
Published: about 8 years ago

10.12688/f1000research.14488.3

Missing the point: are journals using the ideal number of decimal places?
Cited by: 0
Author(s): Adrian Barnett
Software Mentions: 3
Published: about 8 years ago

10.1038/srep41328

PrimerSuite: A High-Throughput Web-Based Primer Design Program for Multiplex Bisulfite PCR
Cited by: 32
Author(s): Jennifer Lu, Andrew D. Johnston, Philippe Berichon, Kelin Ru, Darren Korbie, Matt Trau
Software Mentions: 3
Published: over 9 years ago

10.3389/fmicb.2018.01074

Inorganic Nitrogen Application Affects Both Taxonomical and Predicted Functional Structure of Wheat Rhizosphere Bacterial Communities
Cited by: 83
Author(s): Vanessa Nessner Kavamura, Rifat Hayat, Ian M. Clark, Maike Rossmann, Rodrigo Mendes, P. R. Hirsch, Tim H. Mauchline
Software Mentions: 3
Published: over 8 years ago

10.3390/ijerph18157765

Efficacy of Interventional Programs in Reducing Acculturative Stress and Enhancing Adjustment of International Students to the New Host Educational Environment: A Systematic Review and Meta-Analysis
Cited by: 8
Author(s): Musheer A. Aljaberi, Abdulsamad Alsalahi, Muhamad Hanafiah Juni, Sarah Noman, Ala’a B. Al-Tammemi, Rukman Awang Hamat
Software Mentions: 3
Published: about 5 years ago

10.3390/vaccines8010114

Advanced Safety and Genetic Stability in Mice of a Novel DNA-Launched Venezuelan Equine Encephalitis Virus Vaccine with Rearranged Structural Genes
Cited by: 8
Author(s): Dylan M. Johnson, Kevin J. Sokoloski, Jenny D. Jokinen, Tia L. Pfeffer, Yong Kyu Chu, Robert S. Adcock, Donghoon Chung, Irina Tretyakova, Peter Pushko, Igor S. Lukashevich
Software Mentions: 3
Published: over 6 years ago

10.1371/journal.pntd.0003372

An Updated Insight into the Sialotranscriptome of Triatoma infestans: Developmental Stage and Geographic Variations
Cited by: 35
Author(s): Alexandra Schwarz, Nora Medrano-Mercado, Günter A. Schaub, Cláudio J. Struchiner, M. D. Bargues, Michael Z. Levy, José M. C. Ribeiro
Software Mentions: 3
Published: almost 12 years ago

10.1371/journal.pone.0161907

Cerebral Autoregulation Real-Time Monitoring
Cited by: 8
Author(s): Adi Tsalach, Eliahu Ratner, Stas Lokshin, Zmira Silman, Ilan Breskin, Nahum Budin, Moshe Kamar
Software Mentions: 3
Published: about 10 years ago

10.1186/s40900-021-00305-x

The use of digital storytelling of patients’ stories as an approach to translating knowledge: a scoping review
Cited by: 15
Author(s): Elly Park, Mary Forhan, Allyson Jones
Software Mentions: 3
Published: about 5 years ago

10.1111/obr.12524

Animal models of maternal high fat diet exposure and effects on metabolism in offspring: a meta-regression analysis
Cited by: 82
Author(s): George Ribaroff, Elizabeth Wastnedge, Amanda J. Drake, Richard M. Sharpe, Thomas K. Chambers
Software Mentions: 3
Published: over 9 years ago

10.1038/srep34315

Unravelling molecular mechanisms from floral initiation to lipid biosynthesis in a promising biofuel tree species, Pongamia pinnata using transcriptome analysis
Cited by: 21
Author(s): Rachapudi Venkata Sreeharsha, Shalini Mudalkar, Kambam Tamna Singha, A. Ramachandra Reddy
Software Mentions: 3
Published: almost 10 years ago

10.11604/pamj.supp.2019.33.2.17116

Strengthening immunization service delivery post Ebola virus disease (EVD) outbreak in Liberia 2015-2017
Cited by: 5
Author(s): Adolphus T Clarke, Nicholas Blidi, Joseph Yokie, Mary Momolu, Chukwuemeka Agbo, Roland Tuopileyi, Julius Monday Rude, Mohammed Abdu Seid, Dereje Yohannes, Zakari Wambai, Alex Gasasira, Laura Skrip, Ngozi Kennedy, Evans Lablah, Joseph Okeibunor, Mamoudou Harouna Djingarey, Ambrose Talisuna, Ali Ahmed Yahaya, Soatiana Rajatonirina, Ibrahima Socé Fall
Software Mentions: 3
Published: over 7 years ago

10.3389/fmicb.2020.579929

Population Genetic Analysis of the Theileria annulata Parasites Identified Limited Diversity and Multiplicity of Infection in the Vaccine From India
Cited by: 12
Author(s): Sonti Roy, Vasundhra Bhandari, Madhumanti Barman, Pankaj Kumar, Vandna Bhanot, Jaspreet Singh Arora, Sanjeev Singh, Paresh Sharma
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0040059

Exposure of Soil Microbial Communities to Chromium and Arsenic Alters Their Diversity and Structure
Cited by: 223
Author(s): Cody S. Sheik, Tyler W. Mitchell, Fariha Zakria Rizvi, Yasir Rehman, Muhammad Faisal, Shahida Hasnain, Michael J. McInerney, Lee R. Krumholz
Software Mentions: 3
Published: about 14 years ago

10.1371/journal.pone.0145653

Combining Synthetic Human Odours and Low-Cost Electrocuting Grids to Attract and Kill Outdoor-Biting Mosquitoes: Field and Semi-Field Evaluation of an Improved Mosquito Landing Box
Cited by: 17
Author(s): Nancy S. Matowo, Lizette L. Koekemoer, Sarah Moore, Arnold S. Mmbando, Salum A. Mapua, Maureen Coetzee, Fredros O. Okumu
Software Mentions: 3
Published: over 10 years ago

10.1371/journal.pone.0125964

Genome-Wide Distribution, Organisation and Functional Characterization of Disease Resistance and Defence Response Genes across Rice Species
Cited by: 34
Author(s): S. P. Singh, Suresh Chand, Nagendra Singh, Tilak Raj Sharma
Software Mentions: 3
Published: over 11 years ago

10.1371/journal.pone.0067129

Preliminary Assessment of Microbiome Changes Following Blood-Feeding and Survivorship in the Amblyomma americanum Nymph-to-Adult Transition using Semiconductor Sequencing
Cited by: 72
Author(s): Arturo C. Menchaca, David K. Visi, Otto F. Strey, Pete D. Teel, Kevin Kalinowski, Michael S. Allen, Phillip Williamson
Software Mentions: 3
Published: over 13 years ago

10.1371/journal.pone.0234955

Estimating the prevalence and risk of COVID-19 among international travelers and evacuees of Wuhan through modeling and case reports
Cited by: 20
Author(s): George Luo, Michael L. McHenry, John J. Letterio
Software Mentions: 3
Published: over 6 years ago

10.1371/journal.pone.0245023

Effect of high-intensity interval training on metabolic parameters in women with polycystic ovary syndrome: A systematic review and meta-analysis of randomized controlled trials
Cited by: 15
Author(s): Ivanaldo Santos, Fernando Antônio Santana de Souza Nunes, Victor Sabino de Queiros, Ricardo Ney Cobucci, Pedro Brüch Dantas, Gustavo Mafaldo Soares, Breno Guilherme de Araújo Tinôco Cabral, Técia Maria de Oliveira Maranhão, Paulo Moreira Silva Dantas
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0204395

Decomposition of Ethiopian life expectancy by age and cause of mortality; 1990-2015
Cited by: 12
Author(s): Jembere Gizachew Balew, Youngtae Cho, Myunggu Jung
Software Mentions: 3
Published: almost 8 years ago

10.1371/journal.pone.0251691

Implementation of GeneXpert MTB/Rif proficiency testing program: A Case of the Uganda national tuberculosis reference laboratory/supranational reference laboratory
Cited by: 5
Author(s): Joel Kabugo, Joanita Namutebi, Dennis Mujuni, Andrew Nsawotebba, George William Kasule, Kenneth Musisi, Edgar Kigozi, Nyombi Abdunoor, Pius Lutaaya, Fredrick Kangave, Moses Joloba
Software Mentions: 3
Published: over 5 years ago

10.1038/srep20795

Effects of TRP channel agonist ingestion on metabolism and autonomic nervous system in a randomized clinical trial of healthy subjects
Cited by: 28
Author(s): Stéphanie Michlig, Jenny Meylan Merlini, Maurice Beaumont, Mirko Ledda, Aude Tavenard, Rajat Mukherjee, Susana Camacho, Johannes le Coutre
Software Mentions: 3
Published: over 10 years ago

10.1371/journal.pbio.3000134

Proximal recolonization by self-renewing microglia re-establishes microglial homeostasis in the adult mouse brain
Cited by: 102
Author(s): Lihong Zhan, Grietje Krabbe, Fei Du, Ian Jones, Meredith C. Reichert, Maria Telpoukhovskaia, Lay Kodama, Chao Wang, Seo-Hyun Cho, Faten A. Sayed, Yaqiao Li, David Le, Yungui Zhou, Yin Shen, Brian L. West, Li Gan
Software Mentions: 3
Published: over 7 years ago

10.3390/ani10050784

The Effect of Age, Stage of the Annual Production Cycle and Pregnancy-Rank on the Relationship between Liveweight and Body Condition Score in Extensively Managed Romney Ewes
Cited by: 7
Author(s): Jimmy Semakula, René A. Corner-Thomas, S. T. Morris, Hugh T. Blair, P. R. Kenyon
Software Mentions: 3
Published: over 6 years ago

10.1523/ENEURO.0108-21.2021

Forebrain Neural Precursor Cells Are Differentially Vulnerable to Zika Virus Infection
Cited by: 1
Author(s): Samantha M Shelton, Alexandra R Soucy, Ronni Kurzion, Ella Zeldich, John H. Connor, Tarik F. Haydar
Software Mentions: 3
Published: about 5 years ago

10.7717/peerj.603

GroopM: an automated tool for the recovery of population genomes from related metagenomes
Cited by: 228
Author(s): Michael Imelfort, Donovan H. Parks, Ben J. Woodcroft, Paul G. Dennis, Philip Hugenholtz, Gene W. Tyson
Software Mentions: 3
Published: almost 12 years ago

10.1155/2017/1278932

Empirical Comparison of Visualization Tools for Larger-Scale Network Analysis
Cited by: 39
Author(s): Georgios A. Pavlopoulos, David Páez-Espino, Nikos C. Kyrpides, Ioannis Iliopoulos
Software Mentions: 3
Published: about 9 years ago

10.3390/biom11081133

TCMacro: A Simple and Robust ImageJ-Based Method for Automated Measurement of Tail Coiling Activity in Zebrafish
Cited by: 2
Author(s): Kevin Adi Kurnia, Fiorency Santoso, Bonifasius Putera Sampurna, Gilbert Audira, Jong-Chin Huang, Kelvin H.‐C. Chen, Chung-Der Hsiao
Software Mentions: 3
Published: about 5 years ago

10.3390/ijms21113746

Differential Secretome Profiling of Human Osteoarthritic Synoviocytes Treated with Biotechnological Unsulfated and Marine Sulfated Chondroitins
Cited by: 15
Author(s): Rosita Russo, Valentina Vassallo, Antonietta Stellavato, Mariangela Valletta, Donatella Cimini, Paolo V. Pedone, Chiara Schiraldi, Angela Chambery
Software Mentions: 3
Published: over 6 years ago

10.3390/ijms22031167

Glutamine Uptake via SNAT6 and Caveolin Regulates Glutamine–Glutamate Cycle
Cited by: 14
Author(s): Nikhil R. Gandasi, Vasiliki Arapi, Michel‐Edwar Mickael, Prajakta A. Belekar, Louise Granlund, Lakshmi Kothegala, Robert Fredriksson, Sonchita Bagchi
Software Mentions: 3
Published: over 5 years ago

10.7554/eLife.22037

Operon mRNAs are organized into ORF-centric structures that predict translation efficiency
Cited by: 119
Author(s): David H Burkhardt, Silvi Rouskin, Yan Zhang, Gene-Wei Li, Jonathan S. Weissman, Carol A. Gross
Software Mentions: 3
Published: over 9 years ago

10.7554/eLife.43877

Detailed analysis of chick optic fissure closure reveals Netrin-1 as an essential mediator of epithelial fusion
Cited by: 27
Author(s): Holly Hardy, James Prendergast, Aara Patel, Sunit Dutta, Violeta Trejo-Reveles, Hannah Kröger, Andrea R. Yung, Lisa V. Goodrich, Brian P. Brooks, Jane C. Sowden, Joe Rainger
Software Mentions: 3
Published: over 7 years ago

10.7554/eLife.63101

Investigation of Drosophila fruitless neurons that express Dpr/DIP cell adhesion molecules
Cited by: 12
Author(s): Savannah G Brovero, Julia C Fortier, Hongru Hu, Pamela C Lovejoy, Nicole R. Newell, Colleen M Palmateer, Ruei-Ying Tzeng, Pei-Tseng Lee, Kai Zinn, Michelle N. Arbeitman
Software Mentions: 3
Published: over 5 years ago

10.1186/s12936-018-2517-9

Screening and field performance of powder-formulated insecticides on eave tube inserts against pyrethroid resistant Anopheles gambiae s.l.: an investigation into ‘actives’ prior to a randomized controlled trial in Côte d’Ivoire
Cited by: 9
Author(s): Welbeck A. Oumbouke, Innocent Z. Tia, Antoine M. G. Barreaux, Alphonsine A. Koffi, Eleanore D. Sternberg, Matthew B. Thomas, Raphaël N’Guessan
Software Mentions: 3
Published: almost 8 years ago

10.7554/eLife.64691

Disease-related mutations in PI3Kγ disrupt regulatory C-terminal dynamics and reveal a path to selective inhibitors
Cited by: 23
Author(s): Manoj Kumar Rathinaswamy, Zied Gaieb, Kaelin D Fleming, Chiara Borsari, Noah J Harris, Brandon E Moeller, Matthias P. Wymann, Rommie E. Amaro, John E. Burke
Software Mentions: 3
Published: over 5 years ago

10.7554/eLife.17243

Human intracranial recordings link suppressed transients rather than 'filling-in' to perceptual continuity across blinks
Cited by: 40
Author(s): Tal Golan, Ido Davidesco, Meir Meshulam, David M. Groppe, Pierre Mégevand, Erin Yeagle, Matthew S Goldfinger, Michal Harel, Lucía Melloni, Charles E. Schroeder, Leon Y. Deouell, Ashesh D. Mehta, Rafael Malach
Software Mentions: 3
Published: almost 10 years ago

10.1186/bcr3672

A genomic analysis of mouse models of breast cancer reveals molecular features ofmouse models and relationships to human breast cancer
Cited by: 71
Author(s): Daniel P. Hollern, Eran R. Andrechek
Software Mentions: 3
Published: over 12 years ago

10.1042/BSR20193708

In silico approach to predict pancreatic β-cells classically secreted proteins
Cited by: 1
Author(s): Erika Pinheiro-Machado, Tatiana Orli Milkewitz Sandberg, Celina Pihl, Per Hägglund, Michał Marzec
Software Mentions: 3
Published: over 6 years ago

10.1186/s12967-020-02516-4

Toward a hemorrhagic trauma severity score: fusing five physiological biomarkers
Cited by: 8
Author(s): Ankita Bhat, Daria Podstawczyk, Brandon K. Walther, John R. Aggas, David Machado-Aranda, Kevin R. Ward, Anthony Guiseppi‐Elie
Software Mentions: 3
Published: about 6 years ago

10.1186/s12969-018-0265-6

Proceedings of the 25th European Paediatric Rheumatology Congress (PReS 2018)
Cited by: 27
Author(s):
Software Mentions: 3
Published: about 8 years ago

10.1515/jib-2018-0080

Gene Expression Studies to Identify Significant Genes in AR, MTOR, MAPK Pathways and their Overlapping Regulatory Role in Prostate Cancer
Cited by: 0
Author(s): Nimisha Asati, Abhinav Mishra, Ayush Shukla, Tiratha Raj Singh
Software Mentions: 3
Published: over 7 years ago

10.1155/2018/5206758

Evolution and Expression Divergence of E2 Gene Family under Multiple Abiotic and Phytohormones Stresses inBrassica rapa
Cited by: 8
Author(s): Nadeem Khan, Chunmei Hu, Waleed Amjad Khan, Emal Naseri, Koeun Han, Hansong Dong, Xilin Hou
Software Mentions: 3
Published: about 8 years ago

10.1155/2018/6023457

Genome-Wide Identification, Classification, and Expression Divergence of Glutathione-Transferase Family in Brassica rapa under Multiple Hormone Treatments
Cited by: 18
Author(s): Nadeem Khan, Chunmei Hu, Waleed Amjad Khan, Xilin Hou
Software Mentions: 3
Published: over 8 years ago

10.3390/biology9090260

Computational and Transcriptome Analyses Revealed Preferential Induction of Chemotaxis and Lipid Synthesis by SARS-CoV-2
Cited by: 7
Author(s): Hibah Shaath, Nehad M. Alajez
Software Mentions: 3
Published: about 6 years ago

10.6026/97320630013269

Potential Hemoglobin A/F role in clinical Malaria
Cited by: 1
Author(s): Vikky Awasthi, Debprasad Chattopadhyay, Jyoti Das
Software Mentions: 3
Published: about 9 years ago

10.7554/eLife.19466

Origin and evolution of transporter substrate specificity within the NPF family
Cited by: 78
Author(s): Morten Jørgensen, Deyang Xu, Christoph Crocoll, Heidi A. Ernst, David Ramírez, Mohammed Saddik Motawia, Carl Erik Olsen, Osman Mirza, Hussam Hassan Nour-Eldin
Software Mentions: 3
Published: over 9 years ago

10.1186/s12984-020-00788-x

Commercial head-mounted display virtual reality for upper extremity rehabilitation in chronic stroke: a single-case design study
Cited by: 23
Author(s): Mattias Erhardsson, Margit Alt Murphy, Katharina S. Sunnerhagen
Software Mentions: 3
Published: almost 6 years ago

10.1155/2021/2807236

Research on the Undulatory Motion Mechanism of Seahorse Based on Dynamic Mesh
Cited by: 3
Author(s): Xinyu Quan, Ximing Zhao, Shijie Zhang, Jie Zhou, Nan Yu, Xuyan Hou
Software Mentions: 3
Published: about 5 years ago

10.1186/s13102-021-00318-9

Incidence, severity and perceived susceptibility of COVID-19 in the UK CrossFit population
Cited by: 5
Author(s): Athalie Redwood‐Brown, Grant W. Ralston, Jennifer Wilson
Software Mentions: 3
Published: about 5 years ago

10.1038/s41598-019-50602-5

Next-Generation Sequencing reveals relationship between the larval microbiome and food substrate in the polyphagous Queensland fruit fly
Cited by: 21
Author(s): Rajib Majumder, Brodie Sutcliffe, Phillip W. Taylor, Toni A. Chapman
Software Mentions: 3
Published: almost 7 years ago

10.1038/s41598-019-40892-0

Steered molecular dynamic simulations of conformational lock of Cu, Zn-superoxide dismutase
Cited by: 11
Author(s): Bao-Lin Xiao, Yan-Na Ning, Nan-Nan Niu, Di Li, Ali Akbar Moosavi-Movahedi, Nader Sheibani, Jun Hong
Software Mentions: 3
Published: over 7 years ago

10.1038/s41598-017-14623-2

Using a quantitative quadruple immunofluorescent assay to diagnose isolated mitochondrial Complex I deficiency
Cited by: 19
Author(s): Syeda Ahmed, Charlotte L. Alston, Sila Hopton, Langping He, Iain P. Hargreaves, Gavin Falkous, Monika Oláhová, Robert McFarland, Doug M. Turnbull, Mariana C. Rocha, Robert W. Taylor
Software Mentions: 3
Published: almost 9 years ago

10.1186/s12885-015-1337-3

Transcriptional changes associated with resistance to inhibitors of epidermal growth factor receptor revealed using metaanalysis
Cited by: 3
Author(s): Sidra Younis, Qamar Javed, Miroslav Blumenberg
Software Mentions: 3
Published: over 11 years ago

10.1038/s41598-017-10129-z

CD271 determines migratory properties of melanoma cells
Cited by: 31
Author(s): Josefine Radke, Florian Roßner, Torben Redmer
Software Mentions: 3
Published: about 9 years ago

10.1186/s12870-021-02919-5

Superoxide dismutase (SOD) as a selection criterion for triticale grain yield under drought stress: a comprehensive study on genomics and expression profiling, bioinformatics, heritability, and phenotypic variability
Cited by: 39
Author(s): Armin Saed-Moucheshi, Fatemeh Sohrabi, Elham Fasihfar, Fatemeh Baniasadi, Mehrnaz Riasat, Ali-Akbar Mozafari
Software Mentions: 3
Published: over 5 years ago

10.3762/bjnano.8.101

Needs and challenges for assessing the environmental impacts of engineered nanomaterials (ENMs)
Cited by: 34
Author(s): Michelle Romero-Franco, Hilary Godwin, Muhammad Bilal, Yoram Cohen
Software Mentions: 3
Published: over 9 years ago

10.1038/s41598-017-12104-0

Accumulation of minor alleles and risk prediction in schizophrenia
Cited by: 16
Author(s): Huimin Pang, Xianfu Lei, Dejian Yuan, Zuobin Zhu, Shi Huang
Software Mentions: 3
Published: about 9 years ago

10.1002/iid3.246

Flow Plex —A tool for unbiased comprehensive flow cytometry data analysis
Cited by: 0
Author(s): Johannes Nowatzky, Ezra Resnick, Julia Manasson, Cristy Stagnar, Arshed Al-Obeidi, Olivier Manches
Software Mentions: 3
Published: over 7 years ago

10.1186/s12961-020-00601-0

Making change last? Exploring the value of sustainability approaches in healthcare: a scoping review
Cited by: 20
Author(s): Laura Lennox, A. Linwood-Amor, Lynne Maher, Julie Reed
Software Mentions: 3
Published: almost 6 years ago

10.1111/joa.12821

Pbx loss in cranial neural crest, unlike in epithelium, results in cleft palate only and a broader midface
Cited by: 19
Author(s): Ian Welsh, James Hart, Joel J. Brown, Karissa Hansen, Marcelo Rocha Marques, Robert Aho, Irina Grishina, Romulo Hurtado, Doris Herzlinger, Elisabetta Ferretti, María J. García-García, Licia Selleri
Software Mentions: 3
Published: over 8 years ago

10.1186/s13059-021-02342-x

nPhase: an accurate and contiguous phasing method for polyploids
Cited by: 14
Author(s): Omar Abou Saada, Andreas Tsouris, Chris Eberlein, Anne Friedrich, Joseph Schacherer
Software Mentions: 3
Published: over 5 years ago

10.1186/s12711-021-00664-9

A genome-wide scan to identify signatures of selection in two Iranian indigenous chicken ecotypes
Cited by: 14
Author(s): Elaheh Rostamzadeh Mahdabi, Ali Esmailizadeh, Ahmad Ayatollahi Mehrgardi, Masood Asadi Fozi
Software Mentions: 3
Published: about 5 years ago

10.1080/19490976.2021.1882926

Ethnic variability associating gut and oral microbiome with obesity in children
Cited by: 18
Author(s): Baskar Balakrishnan, Vaithinathan Selvaraju, Jun Chen, Priscilla Ayine, Lu Yang, Jeganathan Ramesh Babu, Thangiah Geetha, Veena Taneja
Software Mentions: 3
Published: over 5 years ago

10.1107/S1600576716010906

Guinier peak analysis for visual and automated inspection of small-angle X-ray scattering data
Cited by: 52
Author(s): Christopher D. Putnam
Software Mentions: 3
Published: about 10 years ago

10.3389/fpsyg.2019.02007

Primes and Consequences: A Systematic Review of Meritocracy in Intergroup Relations
Cited by: 22
Author(s): Andreia Madeira, Rui Costa-Lopes, John F. Dovidio, Gonçalo Freitas, Mafalda F. Mascarenhas
Software Mentions: 3
Published: about 7 years ago

10.3389/fpls.2018.00717

An Immortalized Genetic Mapping Population for Perennial Ryegrass: A Resource for Phenotyping and Complex Trait Mapping
Cited by: 4
Author(s): Janaki Velmurugan, Dan Milbourne, V. Connolly, J. Heslop‐Harrison, Ulrike C. M. Anhalt, M.B. Lynch, Susanne Barth
Software Mentions: 3
Published: over 8 years ago

10.3390/genes11070760

Protein Coding and Long Noncoding RNA (lncRNA) Transcriptional Landscape in SARS-CoV-2 Infected Bronchial Epithelial Cells Highlight a Role for Interferon and Inflammatory Response
Cited by: 90
Author(s): Radhakrishnan Vishnubalaji, Hibah Shaath, Nehad M. Alajez
Software Mentions: 3
Published: about 6 years ago

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