Ecosyste.ms: Papers

10.1007/s10791-017-9306-x

There’s a creepy guy on the other end at Google!: engaging middle school students in a drawing activity to elicit their mental models of Google
Cited by: 24
Author(s): Christie Kodama, Beth St. Jean, Mega Subramaniam, Natalie Greene Taylor
Software Mentions: 2
Published: over 7 years ago

10.1534/g3.115.017053

The Mosaic Mutants of Cucumber: A Method to Produce Knock-Downs of Mitochondrial Transcripts
Cited by: 9
Author(s): Angel R. Del Valle-Echevarria, Agnieszka Kiełkowska, Grzegorz Bartoszewski, Michael J. Havey
Software Mentions: 2
Published: over 9 years ago

10.1371/journal.pbio.2006872

Candida albicans biofilm–induced vesicles confer drug resistance through matrix biogenesis
Cited by: 152
Author(s): Robert Żarnowski, Hiram Sánchez, Antonio S. Covelli, Eddie G. Dominguez, Anna Jaromin, Jörg Bernhardt, Kaitlin Mitchell, Christian Heiß, Parastoo Azadi, Aaron P. Mitchell, David R. Andes
Software Mentions: 2
Published: about 6 years ago

10.1371/journal.pbio.3000292

Deciphering molecular mechanism of silver by integrated omic approaches enables enhancing its antimicrobial efficacy in E. coli
Cited by: 61
Author(s): Haibo Wang, Aixin Yan, Zhigang Liu, Xinming Yang, Zeling Xu, Yuchuan Wang, Runming Wang, Mohamad Koohi‐Moghadam, Ligang Hu, Wei Xia, Huiru Tang, Yulan Wang, Hongyan Li, Hongzhe Sun
Software Mentions: 2
Published: over 5 years ago

10.3389/fpls.2016.00905

Gibberellin-Stimulation of Rhizome Elongation and Differential GA-Responsive Proteomic Changes in Two Grass Species
Cited by: 10
Author(s): Xiqing Ma, Bingru Huang
Software Mentions: 2
Published: over 8 years ago

10.3389/fpsyg.2020.562506

Virtual Trauma Interventions for the Treatment of Post-traumatic Stress Disorders: A Scoping Review
Cited by: 15
Author(s): Thiemo Knaust, Anna Felnhofer, Oswald D. Kothgassner, Helge Höllmer, Robert-Jacek Gorzka, Holger Schulz
Software Mentions: 2
Published: about 4 years ago

10.3389/fnmol.2018.00438

Ca2+ Requirements for Long-Term Depression Are Frequency Sensitive in Purkinje Cells
Cited by: 14
Author(s): C G Zamora Chimal, Erik De Schutter
Software Mentions: 2
Published: almost 6 years ago

10.3389/fmicb.2018.01316

A Bcl-2 Associated Athanogene (bagA) Modulates Sexual Development and Secondary Metabolism in the Filamentous Fungus Aspergillus nidulans
Cited by: 4
Author(s): Sachin Jain, Philipp Wiemann, Elizabeth Thill, Brett Williams, Nancy P. Keller, Mehdi Kabbage
Software Mentions: 2
Published: over 6 years ago

10.3389/fonc.2020.598508

Cancer During Pregnancy: How to Handle the Bioethical Dilemmas?—A Scoping Review With Paradigmatic Cases-Based Analysis
Cited by: 10
Author(s): Diogo Alpuim Costa, José Guilherme Gonçalves Nobre, Susana Baptista de Almeida, Marisa Horta Ferreira, Inês Gonçalves, Sofía Braga, Diogo Pais
Software Mentions: 2
Published: almost 4 years ago

10.3389/fcell.2020.624985

Integrative Proteomic and Phosphoproteomic Analyses of Granulosa Cells During Follicular Atresia in Porcine
Cited by: 4
Author(s): Feng Yang, Qiang Liu, Yanhong Chen, Huizhen Ye, Han Wang, Shenming Zeng
Software Mentions: 2
Published: almost 4 years ago

10.3389/fnbeh.2017.00122

Using Virtual Reality to Assess Ethical Decisions in Road Traffic Scenarios: Applicability of Value-of-Life-Based Models and Influences of Time Pressure
Cited by: 60
Author(s): Leon René Sütfeld, Richard Gast, Peter König, Gordon Pipa
Software Mentions: 2
Published: over 7 years ago

10.1371/journal.ppat.1006001

The Listeria monocytogenes PASTA Kinase PrkA and Its Substrate YvcK Are Required for Cell Wall Homeostasis, Metabolism, and Virulence
Cited by: 61
Author(s): Daniel A. Pensinger, Kyle Boldon, Grischa Y. Chen, William J.B. Vincent, Sherman Kyle, Min Xiong, Adam J. Schaenzer, Emily R. Forster, Jörn Coers, Rob Striker, John-Demian Sauer
Software Mentions: 2
Published: about 8 years ago

10.3389/fgene.2021.656526

Identification of miRNA-Mediated Subpathways as Prostate Cancer Biomarkers Based on Topological Inference in a Machine Learning Process Using Integrated Gene and miRNA Expression Data
Cited by: 0
Author(s): Ziyu Ning, Shuang Yu, Yanqiao Zhao, Xiaoming Sun, Haibin Wu, Xiaoyang Yu
Software Mentions: 2
Published: over 3 years ago

10.3389/fphar.2018.01089

Empirical Scoring Functions for Structure-Based Virtual Screening: Applications, Critical Aspects, and Challenges
Cited by: 170
Author(s): Isabella Alvim Guedes, Felipe Siconha S Pereira, Laurent E. Dardenne
Software Mentions: 2
Published: about 6 years ago

10.1172/jci.insight.98575

Comprehensive immunoproteogenomic analyses of malignant pleural mesothelioma
Cited by: 36
Author(s): Hyun-Sung Lee, Hee-Jin Jang, Jong Min Choi, Jun Zhang, Veronica Lenge De Rosen, Thomas M. Wheeler, Ju-Seog Lee, Thuydung Tu, Peter T. Jindra, Ronald H. Kerman, Sung Yun Jung, Farrah Kheradmand, David J. Sugarbaker, Bryan M. Burt
Software Mentions: 2
Published: over 6 years ago

10.3758/s13421-019-00928-2

How are mental simulations updated across sentences?
Cited by: 12
Author(s): Lara N Hoeben Mannaert, Katinka Dijkstra, Rolf A. Zwaan
Software Mentions: 2
Published: over 5 years ago

10.1186/s12864-015-1230-0

Integrating transcriptomics and proteomics to show that tanshinone IIA suppresses cell growth by blocking glucose metabolism in gastric cancer cells
Cited by: 38
Author(s): Long-Yau Lin, Chieh-Ren Hsia, Chia‐Lang Hsu, Hsuan‐Cheng Huang, Hsueh‐Fen Juan
Software Mentions: 2
Published: almost 10 years ago

10.1093/database/bav037

PEIMAN 1.0: Post-translational modification Enrichment, Integration and Matching ANalysis
Cited by: 8
Author(s): Payman Nickchi, Mohieddin Jafari, Shiva Kalantari
Software Mentions: 2
Published: almost 10 years ago

10.1016/j.dib.2015.02.013

Supporting data for comparative proteomic analysis of Listeria monocytogenes ATCC 7644 exposed to a sublethal concentration of nisin
Cited by: 0
Author(s): Kendi Nishino Miyamoto, Karina Mariante Monteiro, Karin da Silva Caumo, Karina Rodrigues Lorenzatto, Henrique Bunselmeyer Ferreira, Adriano Brandelli
Software Mentions: 2
Published: over 9 years ago

10.1093/database/baw040

RegenBase: a knowledge base of spinal cord injury biology for translational research
Cited by: 10
Author(s): Alison Callahan, Saminda Abeyruwan, Hassan Al-Ali, Kazuhiko Sakurai, Adam R. Ferguson, Phillip G. Popovich, Nigam H. Shah, Ubbo Visser, John L. Bixby, Vance Lemmon
Software Mentions: 2
Published: almost 9 years ago

10.3390/e22030261

A Method Based on GA-CNN-LSTM for Daily Tourist Flow Prediction at Scenic Spots
Cited by: 24
Author(s): Wen‐Xing Li, Haidong Rui, Changyong Liang, Li Jiang, Shuping Zhao, Keqing Li
Software Mentions: 2
Published: over 4 years ago

10.1038/s42003-019-0394-6

Isolation and mass spectrometry based hydroxyproline mapping of type II collagen derived from Capra hircus ear cartilage
Cited by: 13
Author(s): Pintu Maity, Debabrata Dutta, Sayan Ganguly, Kausik Kapat, Krishna Dixit, Amit Roy Chowdhury, Ramapati Samanta, Narayan Chandra Das, Pallab Datta, Amit Kumar Das, Santanu Dhara
Software Mentions: 2
Published: over 5 years ago

10.22074/cellj.2020.7011

hsa-miR-423 rs6505162 Is Associated with The Increased Risk of Breast Cancer in Isfahan Central Province of Iran.
Cited by: 6
Author(s): Nadia Pourmoshir, Gholamreza Motalleb, Sadeq Vallian
Software Mentions: 2
Published: over 4 years ago

10.1155/2016/1281379

ATIPS: Automatic Travel Itinerary Planning System for Domestic Areas
Cited by: 13
Author(s): Hsien-Tsung Chang, Yi-Ming Chang, Meng-Tze Tsai
Software Mentions: 2
Published: almost 9 years ago

10.1186/s12864-016-3408-5

Shotgun proteomics of the barley seed proteome
Cited by: 51
Author(s): Ramamurthy Mahalingam
Software Mentions: 2
Published: almost 8 years ago

10.1371/journal.pone.0045921

Patterns of Information-Seeking for Cancer on the Internet: An Analysis of Real World Data
Cited by: 57
Author(s): Yishai Ofran, Ora Paltiel, Dan Pelleg, Jacob M. Rowe, Elad Yom-Tov
Software Mentions: 2
Published: about 12 years ago

10.1111/acel.12261

Exome sequencing of three cases of familial exceptional longevity
Cited by: 14
Author(s): Timothy P. Cash, Guillermo Pita, Orlando Domı́nguez, María R. Alonso, Leticia T. Moreno, Consuelo Borrás, Leocadio Rodrı́guez-Mañas, Catalina Santiago, Nuria Garatachea, Alejandro Lucía, Juan A. Avellana, José Viña, Anna González‐Neira, Manuel Serrano
Software Mentions: 2
Published: over 10 years ago

10.3390/mps3010015

A Fast and Accurate Method to Identify and Quantify Enzymes in Brush-Border Membranes: In Situ Hydrolysis Followed by Nano LC-MS/MS
Cited by: 7
Author(s): Antonio Brun, Melisa E Magallanes, Carlos Martı́nez del Rio, Gregory A. Barrett-Wilt, William H. Karasov, Enrique Caviedes‐Vidal
Software Mentions: 2
Published: almost 5 years ago

10.3390/cancers13040724

SILAC-Based Quantitative Proteomic Analysis of Oxaliplatin-Resistant Pancreatic Cancer Cells
Cited by: 11
Author(s): Young Eun Kim, Min Jung Kim, Min-Jeong Song, Tae‐Young Kim, Ho Hee Jang, Dukjin Kang
Software Mentions: 2
Published: almost 4 years ago

10.1093/braincomms/fcaa141

Non-invasive measurement of fasciculation frequency demonstrates diagnostic accuracy in amyotrophic lateral sclerosis
Cited by: 6
Author(s): Arina Tamborska, James A. Bashford, Aidan Wickham, Raquel Iniesta, Urooba Masood, Cristina Cabassi, Domen Planinc, Emma F. Hodson-Tole, Emmanuel M. Drakakis, Martyn G. Boutelle, Kerry Mills, Christopher E. Shaw
Software Mentions: 2
Published: almost 5 years ago

10.1007/s41701-019-00065-w

The SFU Opinion and Comments Corpus: A Corpus for the Analysis of Online News Comments
Cited by: 38
Author(s): Varada Kolhatkar, Han‐Han Wu, Luca Cavasso, Emilie Francis, Kavan Shukla, Maïté Taboada
Software Mentions: 2
Published: about 5 years ago

10.4178/epih.e2018041

A review of methods to estimate the visibility factor for bias correction in network scale-up studies
Cited by: 7
Author(s): Ali-Akbar Haghdoost, Milad Ahmadi Gohari, Ali Mirzazadeh, Farzaneh Zolala, Mohammad Reza Baneshi
Software Mentions: 2
Published: over 6 years ago

10.1007/s13361-018-2000-4

Oligomerisation of Synaptobrevin-2 Studied by Native Mass Spectrometry and Chemical Cross-Linking
Cited by: 12
Author(s): Sabine Wittig, Caroline Haupt, Waldemar Hoffmann, Susann Kostmann, Kevin Pagel, Carla Schmidt
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pone.0001440

Gene Characterization Index: Assessing the Depth of Gene Annotation
Cited by: 9
Author(s): Danielle Kemmer, Raf M. Podowski, Dimas Yusuf, Jochen Brumm, Warren A. Cheung, Claes Wahlestedt, Boris Lenhard, Wyeth W. Wasserman
Software Mentions: 2
Published: almost 17 years ago

10.1038/s41598-020-77346-x

Acute pathophysiological myocardial changes following intra-cardiac electrical shocks using a proteomic approach in a sheep model
Cited by: 4
Author(s): Alexandre Bodin, Valérie Labas, Arnaud Bisson, Ana-Paula Teixeira-Gomes, Hélène Blasco, Daniel Tomas, Lucie Combes‐Soia, Paulo Marcelo, Élodie Miquelestorena-Standley, Christophe Baron, Denis Angoulvant, Dominique Babuty, Nicolas Clémenty
Software Mentions: 2
Published: about 4 years ago

10.2196/20797

Exploring User Needs in the Development of a Virtual Reality–Based Advanced Life Support Training Platform: Exploratory Usability Study
Cited by: 14
Author(s): Nathan Moore, Soojeong Yoo, Philip Poronnik, Martin Brown, Naseem Ahmadpour
Software Mentions: 2
Published: over 4 years ago

10.1016/S2214-109X(20)30505-2

Decentralisation, integration, and task-shifting in hepatitis C virus infection testing and treatment: a global systematic review and meta-analysis
Cited by: 92
Author(s): Ena Oru, Adam Trickey, Rohan Shirali, Steve Kanters, Philippa Easterbrook
Software Mentions: 1
Published: over 3 years ago

10.1155/2020/7104806

Acute Bacterial Suppurative Thyroiditis following Fine Needle Aspiration: A Case Report and Review of the Literature
Cited by: 5
Author(s): Zaw Win Htet, E Shyong Tai, Samantha Peiling Yang
Software Mentions: 1
Published: about 4 years ago

10.1186/s12911-019-0901-1

Strategies to reduce diagnostic errors: a systematic review
Cited by: 40
Author(s): Julie Abimanyi-Ochom, Shalika Bohingamu Mudiyanselage, Max Catchpool, Marnie Firipis, Sithara Wanni Arachchige Dona, Jennifer J. Watts
Software Mentions: 1
Published: about 5 years ago

10.5830/CVJA-2013-078

The ADVANCE cardiovascular risk model and current strategies for cardiovascular disease risk evaluation in people with diabetes
Cited by: 22
Author(s): André Pascal Kengne
Software Mentions: 1
Published: almost 11 years ago

10.1186/s12933-018-0759-z

Development of predictive risk models for major adverse cardiovascular events among patients with type 2 diabetes mellitus using health insurance claims data
Cited by: 29
Author(s): James B. Young, Marjolaine Gauthier‐Loiselle, Robert A. Bailey, Ameur M. Manceur, Patrick Lefèbvre, Morris Greenberg, Marie-Hélène Lafeuille, Mei Sheng Duh, Brahim Bookhart, Carol Wysham
Software Mentions: 1
Published: about 6 years ago

10.1186/1472-6947-13-20

People, organizational, and leadership factors impacting informatics support for clinical and translational research
Cited by: 11
Author(s): Philip R. O. Payne, Taylor R. Pressler, Indra Neil Sarkar, Yves A. Lussier
Software Mentions: 1
Published: almost 12 years ago

10.1007/s00262-020-02519-6

Cancer testis antigen Cyclin A1 harbors several HLA-A*02:01-restricted T cell epitopes, which are presented and recognized in vivo
Cited by: 5
Author(s): Anja Tatjana Teck, Sabrina Urban, Petra Quass, Annika Nelde, Heiko Schuster, Anne Letsch, Antonia Busse, Juliane S. Walz, Ulrich Keilholz, Sebastian Ochsenreither
Software Mentions: 1
Published: over 4 years ago

10.1371/journal.pone.0143523

Mapping Soluble Guanylyl Cyclase and Protein Disulfide Isomerase Regions of Interaction
Cited by: 9
Author(s): Erin J. Heckler, Vladyslav Kholodovych, Mohit Raja Jain, Tong Liu, Hong Li, Annie Beuve
Software Mentions: 1
Published: almost 9 years ago

10.1186/s12935-014-0120-x

Comparative secretomic and N-glycoproteomic profiling in human MCF-7 breast cancer and HMEpC normal epithelial cell lines using a gel-based strategy
Cited by: 7
Author(s): Aik-Aun Tan, Alan Kang-Wai Mu, Lik Voon Kiew, Yeng Chen
Software Mentions: 1
Published: almost 10 years ago

10.1186/1472-6947-10-17

Italian hospitals on the web: a cross-sectional analysis of official websites
Cited by: 34
Author(s): Giovanni Maifredi, Grazia Orizio, Maura Bressanelli, Serena Domenighini, Cinzia Gasparotti, Eleonora Perini, Luigi Caimi, Peter Schulz, Umberto Gelatti
Software Mentions: 1
Published: over 14 years ago

10.1371/journal.pone.0016833

Identification of Clinically Relevant Protein Targets in Prostate Cancer with 2D-DIGE Coupled Mass Spectrometry and Systems Biology Network Platform
Cited by: 69
Author(s): Ramesh Ummanni, Frederike Mundt, Heike Pospisil, Simone Venz, Christian Scheffold, Christine Barett, Maria Fälth, Jens Köllermann, Reinhard Walther, Thorsten Schlomm, Guido Sauter, Carsten Bokemeyer, Holger Sültmann, Andreas Schuppert, Tim H. Brümmendorf, Stefan Balabanov
Software Mentions: 1
Published: almost 14 years ago

10.2471/BLT.18.220434

The palm oil industry and noncommunicable diseases
Cited by: 89
Author(s): Sowmya Kadandale, Robert Marten, Richard Smith
Software Mentions: 1
Published: almost 7 years ago

10.1371/journal.pone.0027001

Classification of Sharks in the Egyptian Mediterranean Waters Using Morphological and DNA Barcoding Approaches
Cited by: 24
Author(s): Marie Moftah, S. Aziz, Sara Elramah, Alexandre Favereaux
Software Mentions: 1
Published: about 13 years ago

10.1371/journal.pone.0101389

Population and Demographic Structure of Ixodes scapularis Say in the Eastern United States
Cited by: 39
Author(s): Joyce M. Sakamoto, Jerome Goddard, Jason L. Rasgon
Software Mentions: 1
Published: over 10 years ago

10.1371/journal.pone.0073340

Differential Protective Effects of Exenatide, an Agonist of GLP-1 Receptor and Piragliatin, a Glucokinase Activator in Beta Cell Response to Streptozotocin-Induced and Endoplasmic Reticulum Stresses
Cited by: 9
Author(s): Mi-Kyung Kim, Jin-Hwan Cho, Jaejin Lee, Ye-Hwang Cheong, Moon-Ho Son, Kong Joo Lee
Software Mentions: 1
Published: about 11 years ago

10.1371/journal.pone.0186258

Serial-omics characterization of equine urine
Cited by: 4
Author(s): Min Yuan, Susanne B. Breitkopf, John M. Asara
Software Mentions: 1
Published: about 7 years ago

10.1371/journal.pone.0027205

Functional Organization of hsp70 Cluster in Camel (Camelus dromedarius) and Other Mammals
Cited by: 24
Author(s): Д. Г. Гарбуз, Л. Н. Астахова, Olga G. Zatsepina, Irina R. Arkhipova, Evgeny Nudler, Michael B. Evgen’ev
Software Mentions: 1
Published: about 13 years ago

10.1371/journal.pone.0078353

Proteomic and Immunochemical Characterization of Glutathione Transferase as a New Allergen of the Nematode Ascaris lumbricoides
Cited by: 52
Author(s): Nathalie Acevedo, Jens Henning Mohr, Josefina Zakzuk, Martin Samonig, Peter Briza, Anja Erler, Anna Pomés, Christian G. Huber, Fátima Ferreira, Luis Caraballo
Software Mentions: 1
Published: about 11 years ago

10.1186/s13058-020-01342-2

Trastuzumab-induced upregulation of a protein set in extracellular vesicles emitted by ErbB2-positive breast cancer cells correlates with their trastuzumab sensitivity
Cited by: 8
Author(s): Arik Drucker, Byounghyun Yoo, Iman Khan, Dong-Sic Choi, Laura Montermini, Xiaoyang Liu, Snežana Jovanović, Tallal Younis, Kirill V. Rosen
Software Mentions: 1
Published: about 4 years ago

10.1186/1472-6947-6-7

A MEDLINE categorization algorithm
Cited by: 19
Author(s): Stéfan Jacques Darmoni, Aurélie Névéol, Jean–Marie Renard, Jean-François Gehanno, Lina Fatima Soualmia, Badisse Dahamna, Benoît Thirion
Software Mentions: 1
Published: almost 19 years ago

10.1186/1472-6823-13-58

Sodium glucose co-transport 2 inhibitors in the treatment of type 2 diabetes mellitus: a meta-analysis of randomized double-blind controlled trials
Cited by: 66
Author(s): Asres Berhan, Alex J. Barker
Software Mentions: 1
Published: almost 11 years ago

10.1371/journal.pone.0125687

Googling Stroke ASPECTS to Determine Disability: Exploratory Analysis from VISTA-Acute Collaboration
Cited by: 10
Author(s): Richard Beare, Jian Chen, Thanh G. Phan, Kennedy R. Lees, Myzoon Ali, Andrei V. Alexandrov, Philip M.W. Bath, Erich Bluhmki, Natan M. Bornstein, Lennart Claesson, Stephen M. Davis, Geoffrey A. Donnan, H.-C. Diener, Miles Fisher, Myron D. Ginsberg, Barbara Gregson, James C. Grotta, Werner Hacke, Michael G. Hennerici, Marc Hommel, Markku Kaste, Patrick D. Lyden, John R. Marler, KeithW. Muir, Ralph L. Sacco, Ashfaq Shuaib, Philip Teal, Nils-Gunnar Wahlgren, Steven Warach, Christian Weimar
Software Mentions: 1
Published: over 9 years ago

10.3390/brainsci9110296

Clinical Role of Aspirin in Mood Disorders: A Systematic Review
Cited by: 18
Author(s): Qin Xiang Ng, Krishnapriya Ramamoorthy, Wayren Loke, Matthew Wei Liang Lee, Wee Song Yeo, Donovan Yutong Lim, Vivekanandan Sivalingam
Software Mentions: 1
Published: about 5 years ago

10.1371/journal.pone.0194734

Characterization of the adult Aedes aegypti early midgut peritrophic matrix proteome using LC-MS
Cited by: 22
Author(s): Shavonn Reezale Whiten, W. Keith Ray, Richard F. Helm, Zach N. Adelman
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pone.0049820

Endogenous Hepatitis C Virus Homolog Fragments in European Rabbit and Hare Genomes Replicate in Cell Culture
Cited by: 9
Author(s): Eliane Silva, Sara Marques, Hugo Osório, J. Carvalheira, Gertrude Thompson
Software Mentions: 1
Published: about 12 years ago

10.3390/brainsci11020204

Alignment Effects in Spatial Perspective Taking from an External Vantage Point
Cited by: 2
Author(s): Adamantini Hatzipanayioti, Marios N. Avraamides
Software Mentions: 1
Published: almost 4 years ago

10.1186/s12880-015-0088-6

A recommended workflow methodology in the creation of an educational and training application incorporating a digital reconstruction of the cerebral ventricular system and cerebrospinal fluid circulation to aid anatomical understanding
Cited by: 20
Author(s): Amy Manson, Matthieu Poyade, Paul Rea
Software Mentions: 1
Published: about 9 years ago

10.1371/journal.pone.0007949

Multiple Functions of Nm23-H1 Are Regulated by Oxido-Reduction System
Cited by: 37
Author(s): Eun-Sun Lee, Jaeho Jeong, Sung Eun Kim, Eun Joo Song, Sang Won Kang, Kong Joo Lee
Software Mentions: 1
Published: almost 15 years ago

10.3390/brainsci10010021

Audiohaptic Feedback Enhances Motor Performance in a Low-Fidelity Simulated Drilling Task
Cited by: 8
Author(s): Brianna Grant, Paul Yielder, Tracey A. Patrick, Bill Kapralos, Michael Williams-Bell, Bernadette Murphy
Software Mentions: 1
Published: almost 5 years ago

10.1371/journal.pone.0024670

High-Throughput Sequencing of Three Lemnoideae (Duckweeds) Chloroplast Genomes from Total DNA
Cited by: 119
Author(s): Wenqin Wang, Joachim Messing
Software Mentions: 1
Published: about 13 years ago

10.1371/journal.pone.0005820

Identification of Novel Leishmania donovani Antigens that Help Define Correlates of Vaccine-Mediated Protection in Visceral Leishmaniasis
Cited by: 55
Author(s): Sudipta Bhowmick, Nahid Ali
Software Mentions: 1
Published: over 15 years ago

10.1186/s12920-019-0647-8

Genome analysis and knowledge-driven variant interpretation with TGex
Cited by: 26
Author(s): Dvir Dahary, Yaron Golan, Yaron Mazor, Ofer Zelig, Ruth Barshir, Michal Twik, Tsippi Iny Stein, Guy Rosner, Revital Kariv, Fei Chen, Qiang Zhang, Yiping Shen, Marilyn Safran, Doron Lancet, Simon Fishilevich
Software Mentions: 1
Published: almost 5 years ago

10.1186/s12898-019-0221-4

A model for the biomass–density dynamics of seagrasses developed and calibrated on global data
Cited by: 2
Author(s): Vasco M. N. C. S. Vieira, Inês E. Lopes, Joel Christopher Creed
Software Mentions: 1
Published: almost 6 years ago

10.1371/journal.pone.0105634

A Dataset of Metaphors from the Italian Literature: Exploring Psycholinguistic Variables and the Role of Context
Cited by: 69
Author(s): Valentina Bambini, Donatella Resta, Mirko Grimaldi
Software Mentions: 1
Published: about 10 years ago

10.1371/journal.pone.0203168

Reverse taxonomy applied to the Brachionus calyciflorus cryptic species complex: Morphometric analysis confirms species delimitations revealed by molecular phylogenetic analysis and allows the (re)description of four species
Cited by: 63
Author(s): Evangelia Michaloudi, Spiros Papakostas, Γεώργιος Στάμου, Vilém Neděla, Eva Tihlaříková, Wei Zhang, Steven Declerck
Software Mentions: 1
Published: about 6 years ago

10.1371/journal.pone.0093902

APOA-I: A Possible Novel Biomarker for Metabolic Side Effects in First Episode Schizophrenia
Cited by: 13
Author(s): Xueqin Song, Xue Li, Jinsong Gao, Jingping Zhao, Youhui Li, Xiaoduo Fan, Luxian Lv
Software Mentions: 1
Published: over 10 years ago

10.1186/s13068-016-0461-x

Comparative analysis of the secretomes of Schizophyllum commune and other wood-decay basidiomycetes during solid-state fermentation reveals its unique lignocellulose-degrading enzyme system
Cited by: 82
Author(s): Ning Zhu, Jiawen Liu, Jinshui Yang, Yujian Lin, Yang Yi, Lei Ji, Lei Meng, Hongli Yuan
Software Mentions: 1
Published: almost 9 years ago

10.1186/s13068-017-0783-3

Combining manipulation of transcription factors and overexpression of the target genes to enhance lignocellulolytic enzyme production in Penicillium oxalicum
Cited by: 53
Author(s): Liwei Gao, Zhonghai Li, Cathy H. Xia, Yinbo Qu, Meng Liu, Piao Yang, Lele Yu, Xiao‐Yan Song
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pone.0212815

Human cerebrospinal fluid 6E10-immunoreactive protein species contain amyloid precursor protein fragments
Cited by: 10
Author(s): Marianne Grant, Maureen Handoko, Małgorzata Rózga, Gunnar Brinkmalm, Erik Portelius, Kaj Blennow, Karen H. Ashe, Kathleen R. Zahs, Peng Liu
Software Mentions: 1
Published: over 5 years ago

10.1186/1754-6834-6-101

Physiological adaptations of Saccharomyces cerevisiae evolved for improved butanol tolerance
Cited by: 48
Author(s): Payam Ghiaci, Joakim Norbeck, Christer Larsson
Software Mentions: 1
Published: over 11 years ago

10.1186/s12909-021-02771-z

Comparison of the effectiveness of lecture instruction and virtual reality-based serious gaming instruction on the medical students’ learning outcome about approach to coma
Cited by: 16
Author(s): Meysam Siyah Mansoory, Mohammad Khazaei, Seyyed Mohsen Azizi, Elham Niromand
Software Mentions: 1
Published: over 3 years ago

10.1186/s12898-018-0200-1

The biomass–density relationship in seagrasses and its use as an ecological indicator
Cited by: 11
Author(s): Vasco M. N. C. S. Vieira, Inês E. Lopes, Joel C. Creed
Software Mentions: 1
Published: about 6 years ago

10.1186/1471-2105-11-260

Screensaver: an open source lab information management system (LIMS) for high throughput screening facilities
Cited by: 32
Author(s): Andrew N Tolopko, John P. Sullivan, Sean D. Erickson, David M. Wrobel, Su L. Chiang, Katrina Rudnicki, Stewart Rudnicki, Jennifer Nale, Laura M. Selfors, Dara Greenhouse, Jeremy Muhlich, Caroline E. Shamu
Software Mentions: 1
Published: over 14 years ago

10.1371/journal.pone.0053668

Combination of a Proteomics Approach and Reengineering of Meso Scale Network Models for Prediction of Mode-of-Action for Tyrosine Kinase Inhibitors
Cited by: 7
Author(s): Stefan Balabanov, Thomas Wilhelm, Simone Venz, Gunhild Keller, Christian Scheffold, Heike Pospisil, Melanie Braig, Christine Barett, Carsten Bokemeyer, Reinhard Walther, Tim H. Brümmendorf, Andreas Schuppert
Software Mentions: 1
Published: almost 12 years ago

10.1371/journal.pone.0127104

Forced Fusion in Multisensory Heading Estimation
Cited by: 33
Author(s): Ksander N. de Winkel, Mikhail Katliar, HH Bülthoff
Software Mentions: 1
Published: over 9 years ago

10.1186/s13068-019-1603-8

Mining the biomass deconstructing capabilities of rice yellow stem borer symbionts
Cited by: 9
Author(s): Rahul Singh, Joseph P. Bennett, Manish Gupta, Medha Sharma, Danish Eqbal, Anna Alessi, Adam Dowle, Simon J. McQueen‐Mason, Neil C. Bruce, Syed Shams Yazdani
Software Mentions: 1
Published: about 5 years ago

10.1186/s12914-017-0116-4

Bibliometric analysis of medicine – related publications on refugees, asylum-seekers, and internally displaced people: 2000 – 2015
Cited by: 29
Author(s): Waleed M. Sweileh
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pone.0061743

Toxicological Effects of the Different Substances in Tobacco Smoke on Human Embryonic Development by a Systems Chemo-Biology Approach
Cited by: 30
Author(s): Bruno César Feltes, Joice de Faria Poloni, Daniel Luís Notari, Diego Bonatto
Software Mentions: 1
Published: over 11 years ago

10.1371/journal.pone.0186845

Barcoding the butterflies of southern South America: Species delimitation efficacy, cryptic diversity and geographic patterns of divergence
Cited by: 33
Author(s): Pablo D Lavinia, Ezequiel Osvaldo Núñez Bustos, Cecilia Kopuchian, Darío A Lijtmaer, Natalia C. García, Paul D. N. Hebert, Pablo L. Tubaro
Software Mentions: 1
Published: about 7 years ago

10.1371/journal.pone.0060814

Virologic Response to Tipranavir-Ritonavir or Darunavir-Ritonavir Based Regimens in Antiretroviral Therapy Experienced HIV-1 Patients: A Meta-Analysis and Meta-Regression of Randomized Controlled Clinical Trials
Cited by: 5
Author(s): Asres Berhan, Yifru Berhan
Software Mentions: 1
Published: over 11 years ago

10.1371/journal.pone.0043521

Novel Processed Form of Syndecan-1 Shed from SCC-9 Cells Plays a Role in Cell Migration
Cited by: 38
Author(s): Annelize Zambon Barbosa Aragão, Marília Belloni, Fernando Moreira Simabuco, Mariana R. Zanetti, Sami Yokoo, Romênia R. Domingues, Rebeca Kawahara, Bianca Alves Pauletti, Anderson Gonçalves, Michelle Agostini, Edgard Graner, Ricardo D. Coletta, Jay W. Fox, Adriana Franco Paes Leme
Software Mentions: 1
Published: over 12 years ago

10.1186/s12879-018-3060-6

A systematic review of transmission dynamic studies of methicillin-resistant Staphylococcus aureus in non-hospital residential facilities
Cited by: 14
Author(s): Kin On Kwok, Jonathan M. Read, Arthur Tang, Hong Chen, Steven Riley, Kai Man Kam
Software Mentions: 1
Published: over 6 years ago

10.1186/s12898-019-0218-z

A meta-analysis shows that seaweeds surpass plants, setting life-on-Earth’s limit for biomass packing
Cited by: 15
Author(s): Joel C. Creed, Vasco M. N. C. S. Vieira, Trevor A. Norton, Débora Andrade Caetano
Software Mentions: 1
Published: almost 6 years ago

10.1371/journal.pone.0195701

Hypobaric hypoxia induced renal damage is mediated by altering redox pathway
Cited by: 7
Author(s): Varun Chhabra, Avnika Singh Anand, Amit Kumar Baidya, Shajer Manzoor Malik, Ekta Kohli, Maramreddy Prasanna Kumar Reddy
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pone.0014711

Human Cdc14B Promotes Progression through Mitosis by Dephosphorylating Cdc25 and Regulating Cdk1/Cyclin B Activity
Cited by: 40
Author(s): Indra Tumurbaatar, Onur Cizmecioglu, Ingrid Hoffmann, Ingrid Grummt, Renate Voit
Software Mentions: 1
Published: almost 14 years ago

10.1371/journal.pone.0134794

The Pagerank-Index: Going beyond Citation Counts in Quantifying Scientific Impact of Researchers
Cited by: 60
Author(s): Upul Senanayake, Mahendra Piraveenan, Albert Y. Zomaya
Software Mentions: 1
Published: over 9 years ago

10.3390/biom10050714

Phage Display Selection, Identification, and Characterization of Novel Pancreatic Cancer Targeting Peptides
Cited by: 7
Author(s): Mallika Asar, April Franco, Mette Soendergaard
Software Mentions: 1
Published: over 4 years ago

10.1186/s12879-014-0544-x

Social, economic, and health impact of the respiratory syncytial virus: a systematic search
Cited by: 72
Author(s): Javier Díez‐Domingo, Eduardo González Pérez-Yarza, José A. Melero, Manuel Sánchez‐Luna, M.A. Aguilar, Antonio Javier Blasco, Nelly López Alfaro, Pablo Lázaro
Software Mentions: 1
Published: about 10 years ago

10.1371/journal.pone.0043296

Identification of the Amino Acids 300–600 of IRS-2 as 14-3-3 Binding Region with the Importance of IGF-1/Insulin-Regulated Phosphorylation of Ser-573
Cited by: 12
Author(s): Sabine S. Neukamm, Rachel Toth, Nick Morrice, David G. Campbell, Carol MacKintosh, Rainer Lehmann, Hans-Ulrich Haering, Erwin Schleicher, Cora Weigert
Software Mentions: 1
Published: over 12 years ago

10.1371/journal.pmed.1000230

Ghostwriting at Elite Academic Medical Centers in the United States
Cited by: 74
Author(s): Jeffrey R. Lacasse, Jonathan Leo
Software Mentions: 1
Published: almost 15 years ago

10.1155/2021/6658070

COVID-19 Vaccine, TRIPS, and Global Health Diplomacy: India’s Role at the WTO Platform
Cited by: 32
Author(s): Vijay Kumar Chattu, B. P. Singh, Jaspal Kaur, Mihajlo Jakovljević
Software Mentions: 1
Published: about 3 years ago

10.1371/journal.pcbi.1001066

Structural Properties of the Caenorhabditis elegans Neuronal Network
Cited by: 714
Author(s): Lav R. Varshney, Beth L. Chen, Eric Paniagua, David H. Hall, Dmitri B. Chklovskii
Software Mentions: 1
Published: almost 14 years ago

10.1155/2013/139745

Proteomic Analysis of<i>Trichinella spiralis</i>Muscle Larval Excretory-Secretory Proteins Recognized by Early Infection Sera
Cited by: 17
Author(s): Li Wang, Zhong Quan Wang, Dan Hu, Jing Cui
Software Mentions: 1
Published: almost 12 years ago

10.1186/1471-213X-11-29

Histone deacetylase activity is necessary for left-right patterning during vertebrate development
Cited by: 62
Author(s): Kátia Carneiro, Claudia Donnet, Tomáš Rejtar, Barry L. Karger, Gustavo A. Barisone, Elizabeth Díaz, Sandhya Kortagere, Joan M. Lemire, Michael Levin
Software Mentions: 1
Published: over 13 years ago